RNA–Protein interactions for RNA: ENST00000443785.5

PAXBP1-204, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-204ENST00000443785 PDCP20941 246 aa22.37■■□□□ 1.17
PAXBP1-204ENST00000443785 CCDC144BQ3MJ40 725 aa22.37■■□□□ 1.17
PAXBP1-204ENST00000443785 PPP4R3BQ5MIZ7 849 aa22.37■■□□□ 1.17
PAXBP1-204ENST00000443785 CCDC144CPQ8IYA2 1237 aa22.37■■□□□ 1.17
PAXBP1-204ENST00000443785 ZNF609O15014 1411 aa22.36■■□□□ 1.17
PAXBP1-204ENST00000443785 HIP1O00291 1037 aa22.36■■□□□ 1.17
PAXBP1-204ENST00000443785 BIN1O00499 593 aa22.36■■□□□ 1.17
PAXBP1-204ENST00000443785 GTF3C6Q969F1 213 aa22.36■■□□□ 1.17
PAXBP1-204ENST00000443785 KIF3AQ9Y496 699 aa22.36■■□□□ 1.17
PAXBP1-204ENST00000443785 NPHP3Q7Z494 1330 aa22.36■■□□□ 1.17
PAXBP1-204ENST00000443785 CABP4P57796 275 aa22.36■■□□□ 1.17
PAXBP1-204ENST00000443785 CYP27B1O15528 508 aa22.35■■□□□ 1.17
PAXBP1-204ENST00000443785 ME1P48163 572 aa22.35■■□□□ 1.17
PAXBP1-204ENST00000443785 PHKG2P15735 406 aa22.35■■□□□ 1.17
PAXBP1-204ENST00000443785 ERBB3P21860 1342 aa22.35■■□□□ 1.17
PAXBP1-204ENST00000443785 RXRAP19793 462 aa22.34■■□□□ 1.17
PAXBP1-204ENST00000443785 WASHC4Q2M389 1173 aa22.34■■□□□ 1.17
PAXBP1-204ENST00000443785 MCMDC2Q4G0Z9 681 aa22.34■■□□□ 1.17
PAXBP1-204ENST00000443785 CCAR1Q8IX12 1150 aaKnown RBP22.34■■□□□ 1.17
PAXBP1-204ENST00000443785 USP28Q96RU2 1077 aa22.34■■□□□ 1.17
PAXBP1-204ENST00000443785 SCAND2PQ9GZW5 306 aaPredicted RBP22.34■■□□□ 1.17
PAXBP1-204ENST00000443785 GOLPH3LQ9H4A5 285 aa22.34■■□□□ 1.17
PAXBP1-204ENST00000443785 LRRC37A3O60309 1634 aa22.34■■□□□ 1.17
PAXBP1-204ENST00000443785 PTPDC1A2A3K4 754 aa22.34■■□□□ 1.17
PAXBP1-204ENST00000443785 EPB41L2O43491 1005 aaKnown RBP22.34■■□□□ 1.17
PAXBP1-204ENST00000443785 CLIP2Q9UDT6 1046 aa22.34■■□□□ 1.17
PAXBP1-204ENST00000443785 ANKRD1Q15327 319 aa22.34■■□□□ 1.17
PAXBP1-204ENST00000443785 KCNB2Q92953 911 aa22.34■■□□□ 1.17
PAXBP1-204ENST00000443785 RFX5P48382 616 aaPredicted RBP22.33■■□□□ 1.17
PAXBP1-204ENST00000443785 MED23Q9ULK4 1368 aa22.33■■□□□ 1.16
PAXBP1-204ENST00000443785 U2AF2P26368 475 aaKnown RBP eCLIP22.33■■□□□ 1.166e-8■■■■■ 27.5
PAXBP1-204ENST00000443785 SYNE4Q8N205 404 aa22.33■■□□□ 1.16
PAXBP1-204ENST00000443785 DENND2AQ9ULE3 1009 aa22.33■■□□□ 1.16
PAXBP1-204ENST00000443785 ANKARQ7Z5J8 1434 aa22.32■■□□□ 1.16
PAXBP1-204ENST00000443785 RESTQ13127 1097 aa22.32■■□□□ 1.16
PAXBP1-204ENST00000443785 ATP2B3Q16720 1220 aa22.32■■□□□ 1.16
PAXBP1-204ENST00000443785 CACTINQ8WUQ7 758 aaKnown RBP22.32■■□□□ 1.16
PAXBP1-204ENST00000443785 LTN1O94822 1766 aa22.32■■□□□ 1.16
PAXBP1-204ENST00000443785 A0A1B0GVL5 298 aa22.32■■□□□ 1.16
PAXBP1-204ENST00000443785 SNRPA1P09661 255 aaKnown RBP22.32■■□□□ 1.16
PAXBP1-204ENST00000443785 TERF1P54274 439 aa22.32■■□□□ 1.16
PAXBP1-204ENST00000443785 CHMP4AQ9BY43 222 aa22.32■■□□□ 1.16
PAXBP1-204ENST00000443785 HDAC5Q9UQL6 1122 aa22.32■■□□□ 1.16
PAXBP1-204ENST00000443785 A0A0G2JS52 829 aa22.31■■□□□ 1.16
PAXBP1-204ENST00000443785 USP27XA6NNY8 438 aa22.31■■□□□ 1.16
PAXBP1-204ENST00000443785 CTDNEP1O95476 244 aa22.31■■□□□ 1.16
PAXBP1-204ENST00000443785 ATP5JP18859 108 aa22.31■■□□□ 1.16
PAXBP1-204ENST00000443785 GORABQ5T7V8 394 aa22.31■■□□□ 1.16
PAXBP1-204ENST00000443785 CHAF1AQ13111 956 aaPredicted RBP22.31■■□□□ 1.16
PAXBP1-204ENST00000443785 CLSTN2Q9H4D0 955 aa22.31■■□□□ 1.16
PAXBP1-204ENST00000443785 GOLGA6L6A8MZA4 724 aa22.3■■□□□ 1.16
PAXBP1-204ENST00000443785 GOLGA6L19H0YKK7 550 aa22.3■■□□□ 1.16
PAXBP1-204ENST00000443785 ADORA1P30542 326 aa22.3■■□□□ 1.16
PAXBP1-204ENST00000443785 TPD52L1Q16890 204 aaPredicted RBP22.3■■□□□ 1.16
PAXBP1-204ENST00000443785 PAG1Q9NWQ8 432 aa22.3■■□□□ 1.16
PAXBP1-204ENST00000443785 BECN2A8MW95 431 aa22.3■■□□□ 1.16
PAXBP1-204ENST00000443785 ZNF75DP51815 510 aa22.3■■□□□ 1.16
PAXBP1-204ENST00000443785 NBPF26B4DH59 902 aa22.29■■□□□ 1.16
PAXBP1-204ENST00000443785 NBPF14Q5TI25 921 aa22.29■■□□□ 1.16
PAXBP1-204ENST00000443785 NBPF10Q6P3W6 841 aaKnown RBP22.29■■□□□ 1.16
PAXBP1-204ENST00000443785 NBPF15Q8N660 670 aa22.29■■□□□ 1.16
PAXBP1-204ENST00000443785 ARHGAP23Q9P227 1491 aa22.29■■□□□ 1.16
PAXBP1-204ENST00000443785 COPRSQ9NQ92 184 aa22.29■■□□□ 1.16
PAXBP1-204ENST00000443785 IFIT1P09914 478 aaKnown RBP22.28■■□□□ 1.16
PAXBP1-204ENST00000443785 ZSCAN25Q6NSZ9 544 aa22.28■■□□□ 1.16
PAXBP1-204ENST00000443785 IFNL2Q8IZJ0 200 aa22.28■■□□□ 1.16
PAXBP1-204ENST00000443785 FSIP1Q8NA03 581 aa22.28■■□□□ 1.16
PAXBP1-204ENST00000443785 NSUN7Q8NE18 718 aaKnown RBP22.28■■□□□ 1.16
PAXBP1-204ENST00000443785 TNNT1P13805 278 aa22.28■■□□□ 1.16
PAXBP1-204ENST00000443785 HSP90AA4PQ58FG1 418 aa22.28■■□□□ 1.16
PAXBP1-204ENST00000443785 KIF13AQ9H1H9 1805 aa22.28■■□□□ 1.16
PAXBP1-204ENST00000443785 M0R2C6 588 aa22.27■■□□□ 1.16
PAXBP1-204ENST00000443785 SDF4Q9BRK5 362 aa22.27■■□□□ 1.16
PAXBP1-204ENST00000443785 NFAT5O94916 1531 aa22.27■■□□□ 1.16
PAXBP1-204ENST00000443785 KDM6AO15550 1401 aaPredicted RBP22.27■■□□□ 1.15
PAXBP1-204ENST00000443785 E7EWF7 191 aa22.27■■□□□ 1.15
PAXBP1-204ENST00000443785 AIFM3Q96NN9 605 aa22.27■■□□□ 1.15
PAXBP1-204ENST00000443785 HAUS7Q99871 368 aa22.27■■□□□ 1.15
PAXBP1-204ENST00000443785 U3KPZ7 1027 aaPredicted RBP22.27■■□□□ 1.15
PAXBP1-204ENST00000443785 HSPD1P10809 573 aaKnown RBP22.26■■□□□ 1.15
PAXBP1-204ENST00000443785 KBTBD3Q8NAB2 608 aa22.26■■□□□ 1.15
PAXBP1-204ENST00000443785 DDX19AQ9NUU7 478 aaKnown RBP22.26■■□□□ 1.15
PAXBP1-204ENST00000443785 SPTLC3Q9NUV7 552 aa22.26■■□□□ 1.15
PAXBP1-204ENST00000443785 HMG20BQ9P0W2 317 aa22.26■■□□□ 1.15
PAXBP1-204ENST00000443785 A0A1B0GUL7 405 aa22.26■■□□□ 1.15
PAXBP1-204ENST00000443785 SCARF1Q14162 830 aa22.26■■□□□ 1.15
PAXBP1-204ENST00000443785 AOPEPQ8N6M6 819 aa22.26■■□□□ 1.15
PAXBP1-204ENST00000443785 ZBTB9Q96C00 473 aa22.26■■□□□ 1.15
PAXBP1-204ENST00000443785 FAM89AQ96GI7 184 aa22.26■■□□□ 1.15
PAXBP1-204ENST00000443785 MARF1Q9Y4F3 1742 aaKnown RBP22.25■■□□□ 1.15
PAXBP1-204ENST00000443785 SLIT1O75093 1534 aa22.25■■□□□ 1.15
PAXBP1-204ENST00000443785 SF3A1Q15459 793 aaKnown RBP22.25■■□□□ 1.15
PAXBP1-204ENST00000443785 DHX32Q7L7V1 743 aaKnown RBP22.25■■□□□ 1.15
PAXBP1-204ENST00000443785 OSBP2Q969R2 916 aa22.25■■□□□ 1.15
PAXBP1-204ENST00000443785 STRN4Q9NRL3 753 aa22.25■■□□□ 1.15
PAXBP1-204ENST00000443785 UTYO14607 1347 aa22.25■■□□□ 1.15
PAXBP1-204ENST00000443785 GPTP24298 496 aa22.25■■□□□ 1.15
PAXBP1-204ENST00000443785 PRIMPOLQ96LW4 560 aa22.25■■□□□ 1.15
PAXBP1-204ENST00000443785 INCENPQ9NQS7 918 aa22.25■■□□□ 1.15
PAXBP1-204ENST00000443785 HMGN5P82970 282 aaKnown RBP22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 157.3 ms