RNA–Protein interactions for RNA: ENST00000441871.5

R3HDM1-209, Transcript of R3H domain containing 1, humanhuman

TSL 4

Gene R3HDM1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-209ENST00000441871 SLKQ9H2G2 1235 aaPredicted RBP4.79□□□□□ -1.64
R3HDM1-209ENST00000441871 RANBP17Q9H2T7 1088 aaKnown RBP4.79□□□□□ -1.64
R3HDM1-209ENST00000441871 TMX1Q9H3N1 280 aa4.79□□□□□ -1.64
R3HDM1-209ENST00000441871 HOMER2Q9NSB8 354 aa4.79□□□□□ -1.64
R3HDM1-209ENST00000441871 FAM13BQ9NYF5 915 aa4.79□□□□□ -1.64
R3HDM1-209ENST00000441871 CLIC5Q9NZA1 410 aa4.79□□□□□ -1.64
R3HDM1-209ENST00000441871 SLAIN2Q9P270 581 aa4.79□□□□□ -1.64
R3HDM1-209ENST00000441871 ZNF69Q9UC07 566 aa4.79□□□□□ -1.64
R3HDM1-209ENST00000441871 RABGAP1Q9Y3P9 1069 aa4.79□□□□□ -1.64
R3HDM1-209ENST00000441871 TRIM64CA6NLI5 447 aa4.78□□□□□ -1.64
R3HDM1-209ENST00000441871 PER1O15534 1290 aaPredicted RBP4.78□□□□□ -1.64
R3HDM1-209ENST00000441871 SLC26A4O43511 780 aa4.78□□□□□ -1.64
R3HDM1-209ENST00000441871 F12P00748 615 aaPredicted RBP4.78□□□□□ -1.64
R3HDM1-209ENST00000441871 LMNB1P20700 586 aa4.78□□□□□ -1.64
R3HDM1-209ENST00000441871 SMCPP49901 116 aaPredicted RBP4.78□□□□□ -1.64
R3HDM1-209ENST00000441871 FANCCQ00597 558 aa4.78□□□□□ -1.64
R3HDM1-209ENST00000441871 VAC14Q08AM6 782 aa4.78□□□□□ -1.64
R3HDM1-209ENST00000441871 KIAA2012Q0VF49 1180 aa4.78□□□□□ -1.64
R3HDM1-209ENST00000441871 SEPT2Q15019 361 aa4.78□□□□□ -1.64
R3HDM1-209ENST00000441871 TAF11Q15544 211 aa4.78□□□□□ -1.64
R3HDM1-209ENST00000441871 HSP90B2PQ58FF3 399 aa4.78□□□□□ -1.64
R3HDM1-209ENST00000441871 ZC3H12AQ5D1E8 599 aaKnown RBP4.78□□□□□ -1.64
R3HDM1-209ENST00000441871 IQCEQ6IPM2 695 aa4.78□□□□□ -1.64
R3HDM1-209ENST00000441871 CCDC73Q6ZRK6 1079 aa4.78□□□□□ -1.64
R3HDM1-209ENST00000441871 TAS1R3Q7RTX0 852 aa4.78□□□□□ -1.64
R3HDM1-209ENST00000441871 LCA5Q86VQ0 697 aa4.78□□□□□ -1.64
R3HDM1-209ENST00000441871 IFNL3Q8IZI9 196 aa4.78□□□□□ -1.64
R3HDM1-209ENST00000441871 ACRBPQ8NEB7 543 aa4.78□□□□□ -1.64
R3HDM1-209ENST00000441871 ITFG2Q969R8 447 aa4.78□□□□□ -1.64
R3HDM1-209ENST00000441871 CDHR1Q96JP9 859 aa4.78□□□□□ -1.64
R3HDM1-209ENST00000441871 FAM210AQ96ND0 272 aa4.78□□□□□ -1.64
R3HDM1-209ENST00000441871 ZNF700Q9H0M5 742 aa4.78□□□□□ -1.64
R3HDM1-209ENST00000441871 ENAMQ9NRM1 1142 aa4.78□□□□□ -1.64
R3HDM1-209ENST00000441871 METTL5Q9NRN9 209 aaKnown RBP4.78□□□□□ -1.64
R3HDM1-209ENST00000441871 NOVA2Q9UNW9 492 aaKnown RBP4.78□□□□□ -1.64
R3HDM1-209ENST00000441871 ZNF652Q9Y2D9 606 aa4.78□□□□□ -1.64
R3HDM1-209ENST00000441871 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.78□□□□□ -1.64
R3HDM1-209ENST00000441871 MRPS23Q9Y3D9 190 aaKnown RBP4.78□□□□□ -1.64
R3HDM1-209ENST00000441871 PPP2R3BQ9Y5P8 575 aa4.78□□□□□ -1.64
R3HDM1-209ENST00000441871 GJA3Q9Y6H8 435 aa4.78□□□□□ -1.64
R3HDM1-209ENST00000441871 RAD54L2Q9Y4B4 1467 aa4.77□□□□□ -1.65
R3HDM1-209ENST00000441871 MAGEB6P1A0A0J9YX57 407 aa4.77□□□□□ -1.65
R3HDM1-209ENST00000441871 A0A1W2PRQ8 180 aa4.77□□□□□ -1.65
R3HDM1-209ENST00000441871 C11orf95C9JLR9 678 aaPredicted RBP4.77□□□□□ -1.65
R3HDM1-209ENST00000441871 IPO5O00410 1097 aaKnown RBP4.77□□□□□ -1.65
R3HDM1-209ENST00000441871 LCE2BO14633 110 aa4.77□□□□□ -1.65
R3HDM1-209ENST00000441871 TSPAN6O43657 245 aa4.77□□□□□ -1.65
R3HDM1-209ENST00000441871 PPFIA3O75145 1194 aa4.77□□□□□ -1.65
R3HDM1-209ENST00000441871 VAMP4O75379 141 aa4.77□□□□□ -1.65
R3HDM1-209ENST00000441871 NAT2P11245 290 aa4.77□□□□□ -1.65
R3HDM1-209ENST00000441871 FOSL1P15407 271 aa4.77□□□□□ -1.65
R3HDM1-209ENST00000441871 CD151P48509 253 aa4.77□□□□□ -1.65
R3HDM1-209ENST00000441871 EIF5P55010 431 aaKnown RBP4.77□□□□□ -1.65
R3HDM1-209ENST00000441871 NAP1L1P55209 391 aaKnown RBP4.77□□□□□ -1.65
R3HDM1-209ENST00000441871 CTDSPL2Q05D32 466 aa4.77□□□□□ -1.65
R3HDM1-209ENST00000441871 SLC4A8Q2Y0W8 1093 aa4.77□□□□□ -1.65
R3HDM1-209ENST00000441871 KANK4Q5T7N3 995 aaPredicted RBP4.77□□□□□ -1.65
R3HDM1-209ENST00000441871 ARMC3Q5W041 872 aa4.77□□□□□ -1.65
R3HDM1-209ENST00000441871 CATIPQ7Z7H3 387 aa4.77□□□□□ -1.65
R3HDM1-209ENST00000441871 ZSCAN29Q8IWY8 852 aaPredicted RBP4.77□□□□□ -1.65
R3HDM1-209ENST00000441871 CRIPAKQ8N1N5 446 aa4.77□□□□□ -1.65
R3HDM1-209ENST00000441871 HELQQ8TDG4 1101 aa4.77□□□□□ -1.65
R3HDM1-209ENST00000441871 ATRIPQ8WXE1 791 aa4.77□□□□□ -1.65
R3HDM1-209ENST00000441871 HPS1Q92902 700 aa4.77□□□□□ -1.65
R3HDM1-209ENST00000441871 GPKOWQ92917 476 aaPredicted RBP eCLIP4.77□□□□□ -1.65
R3HDM1-209ENST00000441871 C22orf23Q9BZE7 217 aa4.77□□□□□ -1.65
R3HDM1-209ENST00000441871 SUDS3Q9H7L9 328 aaPredicted RBP4.77□□□□□ -1.65
R3HDM1-209ENST00000441871 SENP2Q9HC62 589 aa4.77□□□□□ -1.65
R3HDM1-209ENST00000441871 PARP2Q9UGN5 583 aa4.77□□□□□ -1.65
R3HDM1-209ENST00000441871 EVLQ9UI08 416 aaPredicted RBP4.77□□□□□ -1.65
R3HDM1-209ENST00000441871 TMCC3Q9ULS5 477 aa4.77□□□□□ -1.65
R3HDM1-209ENST00000441871 PRRT4C9JH25 899 aa4.76□□□□□ -1.65
R3HDM1-209ENST00000441871 CAPN5O15484 640 aaPredicted RBP4.76□□□□□ -1.65
R3HDM1-209ENST00000441871 SIAH2O43255 324 aa4.76□□□□□ -1.65
R3HDM1-209ENST00000441871 RPN1P04843 607 aaKnown RBP4.76□□□□□ -1.65
R3HDM1-209ENST00000441871 TPM2P07951 284 aa4.76□□□□□ -1.65
R3HDM1-209ENST00000441871 SCNN1AP37088 669 aa4.76□□□□□ -1.65
R3HDM1-209ENST00000441871 IFT88Q13099 833 aa4.76□□□□□ -1.65
R3HDM1-209ENST00000441871 DCTN1Q14203 1278 aa4.76□□□□□ -1.65
R3HDM1-209ENST00000441871 NFE2Q16621 373 aaPredicted RBP4.76□□□□□ -1.65
R3HDM1-209ENST00000441871 GRAMD1BQ3KR37 738 aa4.76□□□□□ -1.65
R3HDM1-209ENST00000441871 ACBD5Q5T8D3 534 aaPredicted RBP4.76□□□□□ -1.65
R3HDM1-209ENST00000441871 DUSP27Q5VZP5 1158 aa4.76□□□□□ -1.65
R3HDM1-209ENST00000441871 KLHL10Q6JEL2 608 aa4.76□□□□□ -1.65
R3HDM1-209ENST00000441871 TBC1D9Q6ZT07 1266 aa4.76□□□□□ -1.65
R3HDM1-209ENST00000441871 TTC30AQ86WT1 665 aa4.76□□□□□ -1.65
R3HDM1-209ENST00000441871 MCF2L2Q86YR7 1114 aa4.76□□□□□ -1.65
R3HDM1-209ENST00000441871 E2F7Q96AV8 911 aa4.76□□□□□ -1.65
R3HDM1-209ENST00000441871 CARD14Q9BXL6 1004 aa4.76□□□□□ -1.65
R3HDM1-209ENST00000441871 C12orf49Q9H741 205 aa4.76□□□□□ -1.65
R3HDM1-209ENST00000441871 LGR6Q9HBX8 967 aa4.76□□□□□ -1.65
R3HDM1-209ENST00000441871 CD248Q9HCU0 757 aa4.76□□□□□ -1.65
R3HDM1-209ENST00000441871 FBXO2Q9UK22 296 aaPredicted RBP4.76□□□□□ -1.65
R3HDM1-209ENST00000441871 INPP5FQ9Y2H2 1132 aa4.76□□□□□ -1.65
R3HDM1-209ENST00000441871 TLL2Q9Y6L7 1015 aa4.76□□□□□ -1.65
R3HDM1-209ENST00000441871 NDUFB9Q9Y6M9 179 aa4.76□□□□□ -1.65
R3HDM1-209ENST00000441871 PRSS47A8MTI9 375 aa4.75□□□□□ -1.65
R3HDM1-209ENST00000441871 FIBPO43427 364 aa4.75□□□□□ -1.65
R3HDM1-209ENST00000441871 ORC4O43929 436 aa4.75□□□□□ -1.65
R3HDM1-209ENST00000441871 SRGNP10124 158 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms