RNA–Protein interactions for RNA: ENST00000441730.2

BRPF3-204, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5

Gene BRPF3, Length 3,329 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-204ENST00000441730 RBM25P49756 843 aaKnown RBP12.37□□□□□ -0.43
BRPF3-204ENST00000441730 CCDC97Q96F63 343 aaPredicted RBP12.37□□□□□ -0.43
BRPF3-204ENST00000441730 DDX19BQ9UMR2 479 aa12.37□□□□□ -0.43
BRPF3-204ENST00000441730 SUFUQ9UMX1 484 aa12.37□□□□□ -0.43
BRPF3-204ENST00000441730 HOXB7P09629 217 aa12.37□□□□□ -0.43
BRPF3-204ENST00000441730 MKL1Q969V6 931 aa12.37□□□□□ -0.43
BRPF3-204ENST00000441730 UTRNP46939 3433 aa12.37□□□□□ -0.43
BRPF3-204ENST00000441730 KLHDC4Q8TBB5 520 aa12.36□□□□□ -0.43
BRPF3-204ENST00000441730 SCP2P22307 547 aa12.36□□□□□ -0.43
BRPF3-204ENST00000441730 SETDB2Q96T68 719 aa12.36□□□□□ -0.43
BRPF3-204ENST00000441730 LIG1P18858 919 aa12.36□□□□□ -0.43
BRPF3-204ENST00000441730 IL6STP40189 918 aaPredicted RBP12.36□□□□□ -0.43
BRPF3-204ENST00000441730 JMYQ8N9B5 988 aa12.36□□□□□ -0.43
BRPF3-204ENST00000441730 PLBD2Q8NHP8 589 aa12.36□□□□□ -0.43
BRPF3-204ENST00000441730 NOL10Q9BSC4 688 aaKnown RBP12.36□□□□□ -0.43
BRPF3-204ENST00000441730 RAD21O60216 631 aa12.35□□□□□ -0.43
BRPF3-204ENST00000441730 PDE3AQ14432 1141 aa12.35□□□□□ -0.43
BRPF3-204ENST00000441730 MSL3Q8N5Y2 521 aaKnown RBP12.35□□□□□ -0.43
BRPF3-204ENST00000441730 FEZ1Q99689 392 aa12.35□□□□□ -0.43
BRPF3-204ENST00000441730 ABCC6O95255 1503 aa12.35□□□□□ -0.43
BRPF3-204ENST00000441730 RPS6KA4O75676 772 aa12.35□□□□□ -0.43
BRPF3-204ENST00000441730 CCT4P50991 539 aaKnown RBP12.35□□□□□ -0.43
BRPF3-204ENST00000441730 NRAPQ86VF7 1730 aa12.35□□□□□ -0.43
BRPF3-204ENST00000441730 NWD2Q9ULI1 1742 aa12.35□□□□□ -0.43
BRPF3-204ENST00000441730 CTAGE5O15320 804 aa12.34□□□□□ -0.43
BRPF3-204ENST00000441730 EIF5P55010 431 aaKnown RBP12.34□□□□□ -0.43
BRPF3-204ENST00000441730 PCDHB15Q9Y5E8 787 aa12.34□□□□□ -0.43
BRPF3-204ENST00000441730 PTPRCP08575 1304 aa12.34□□□□□ -0.43
BRPF3-204ENST00000441730 SPDYE4A6NLX3 237 aa12.34□□□□□ -0.43
BRPF3-204ENST00000441730 IGKV5-2P06315 115 aa12.34□□□□□ -0.43
BRPF3-204ENST00000441730 HS1BP3Q53T59 392 aa12.34□□□□□ -0.43
BRPF3-204ENST00000441730 MYRIPQ8NFW9 859 aa12.34□□□□□ -0.43
BRPF3-204ENST00000441730 METTL22Q9BUU2 404 aaPredicted RBP12.34□□□□□ -0.43
BRPF3-204ENST00000441730 CWC25Q9NXE8 425 aaPredicted RBP12.34□□□□□ -0.43
BRPF3-204ENST00000441730 EXOC6BQ9Y2D4 811 aa12.34□□□□□ -0.43
BRPF3-204ENST00000441730 PARP4Q9UKK3 1724 aaKnown RBP12.34□□□□□ -0.43
BRPF3-204ENST00000441730 SRGAP3O43295 1099 aa12.34□□□□□ -0.43
BRPF3-204ENST00000441730 TBC1D9BQ66K14 1250 aa12.34□□□□□ -0.43
BRPF3-204ENST00000441730 COL23A1Q86Y22 540 aaPredicted RBP12.34□□□□□ -0.43
BRPF3-204ENST00000441730 GOLGA6CA6NDK9 693 aa12.33□□□□□ -0.44
BRPF3-204ENST00000441730 GOLGA6BA6NDN3 693 aa12.33□□□□□ -0.44
BRPF3-204ENST00000441730 IPO7O95373 1038 aaKnown RBP12.33□□□□□ -0.44
BRPF3-204ENST00000441730 GOLGA6DP0CG33 693 aa12.33□□□□□ -0.44
BRPF3-204ENST00000441730 LINS1Q8NG48 757 aa12.33□□□□□ -0.44
BRPF3-204ENST00000441730 UPF1Q92900 1129 aaKnown RBP eCLIP12.33□□□□□ -0.448e-7■■□□□ 11.6
BRPF3-204ENST00000441730 PPP1R9BQ96SB3 815 aa12.33□□□□□ -0.44
BRPF3-204ENST00000441730 RASSF4Q9H2L5 321 aa12.33□□□□□ -0.44
BRPF3-204ENST00000441730 GOLGA6AQ9NYA3 693 aa12.33□□□□□ -0.44
BRPF3-204ENST00000441730 PA2G4Q9UQ80 394 aaKnown RBP12.33□□□□□ -0.44
BRPF3-204ENST00000441730 ZNF652Q9Y2D9 606 aa12.33□□□□□ -0.44
BRPF3-204ENST00000441730 COQ9O75208 318 aa12.33□□□□□ -0.44
BRPF3-204ENST00000441730 DDX46Q7L014 1031 aaKnown RBP12.33□□□□□ -0.44
BRPF3-204ENST00000441730 USP44Q9H0E7 712 aa12.33□□□□□ -0.44
BRPF3-204ENST00000441730 CXorf56Q9H5V9 222 aa12.33□□□□□ -0.44
BRPF3-204ENST00000441730 RPS6KL1Q9Y6S9 549 aa12.33□□□□□ -0.44
BRPF3-204ENST00000441730 MAP3K15Q6ZN16 1313 aa12.33□□□□□ -0.44
BRPF3-204ENST00000441730 COL15A1P39059 1388 aa12.33□□□□□ -0.44
BRPF3-204ENST00000441730 GRM8O00222 908 aa12.32□□□□□ -0.44
BRPF3-204ENST00000441730 SLFN14P0C7P3 912 aa12.32□□□□□ -0.44
BRPF3-204ENST00000441730 TCIRG1Q13488 830 aa12.32□□□□□ -0.44
BRPF3-204ENST00000441730 BEND3Q5T5X7 828 aa12.32□□□□□ -0.44
BRPF3-204ENST00000441730 ZNF710Q8N1W2 664 aa12.32□□□□□ -0.44
BRPF3-204ENST00000441730 NEURL1BA8MQ27 555 aa12.32□□□□□ -0.44
BRPF3-204ENST00000441730 GNAI2P04899 355 aa12.32□□□□□ -0.44
BRPF3-204ENST00000441730 C1QTNF12Q5T7M4 302 aa12.32□□□□□ -0.44
BRPF3-204ENST00000441730 LMBR1LQ6UX01 489 aa12.32□□□□□ -0.44
BRPF3-204ENST00000441730 GIGYF2Q6Y7W6 1299 aaKnown RBP12.32□□□□□ -0.44
BRPF3-204ENST00000441730 ADCY9O60503 1353 aa12.32□□□□□ -0.44
BRPF3-204ENST00000441730 GZF1Q9H116 711 aaPredicted RBP12.32□□□□□ -0.44
BRPF3-204ENST00000441730 LRRC37A3O60309 1634 aa12.31□□□□□ -0.44
BRPF3-204ENST00000441730 PLSCR1O15162 318 aa12.31□□□□□ -0.44
BRPF3-204ENST00000441730 SURF6O75683 361 aaKnown RBP12.31□□□□□ -0.44
BRPF3-204ENST00000441730 GCKRQ14397 625 aa12.31□□□□□ -0.44
BRPF3-204ENST00000441730 ZRSR2Q15696 482 aaKnown RBP12.31□□□□□ -0.44
BRPF3-204ENST00000441730 SLC15A2Q16348 729 aa12.31□□□□□ -0.44
BRPF3-204ENST00000441730 SLC27A3Q5K4L6 730 aa12.31□□□□□ -0.44
BRPF3-204ENST00000441730 SUSD4Q5VX71 490 aa12.31□□□□□ -0.44
BRPF3-204ENST00000441730 ZNF594Q96JF6 807 aaPredicted RBP12.31□□□□□ -0.44
BRPF3-204ENST00000441730 NUCKS1Q9H1E3 243 aaKnown RBP12.31□□□□□ -0.44
BRPF3-204ENST00000441730 OGFRQ9NZT2 677 aa12.31□□□□□ -0.44
BRPF3-204ENST00000441730 MMP10P09238 476 aa12.31□□□□□ -0.44
BRPF3-204ENST00000441730 CCT2P78371 535 aaKnown RBP12.31□□□□□ -0.44
BRPF3-204ENST00000441730 C11orf91Q3C1V1 193 aa12.31□□□□□ -0.44
BRPF3-204ENST00000441730 SWT1Q5T5J6 900 aaKnown RBP12.31□□□□□ -0.44
BRPF3-204ENST00000441730 ANKRD45Q5TZF3 282 aa12.31□□□□□ -0.44
BRPF3-204ENST00000441730 CAMKK2Q96RR4 588 aa12.31□□□□□ -0.44
BRPF3-204ENST00000441730 IL1RAPL2Q9NP60 686 aa12.31□□□□□ -0.44
BRPF3-204ENST00000441730 ANAPC4Q9UJX5 808 aa12.31□□□□□ -0.44
BRPF3-204ENST00000441730 RAD50Q92878 1312 aa12.31□□□□□ -0.44
BRPF3-204ENST00000441730 IRS4O14654 1257 aaPredicted RBP12.31□□□□□ -0.44
BRPF3-204ENST00000441730 ZBTB7BO15156 539 aaPredicted RBP12.31□□□□□ -0.44
BRPF3-204ENST00000441730 GNAI3P08754 354 aa12.31□□□□□ -0.44
BRPF3-204ENST00000441730 PDCL2Q8N4E4 241 aa12.31□□□□□ -0.44
BRPF3-204ENST00000441730 SUCLG2Q96I99 432 aa12.31□□□□□ -0.44
BRPF3-204ENST00000441730 SMARCA5O60264 1052 aaPredicted RBP12.3□□□□□ -0.44
BRPF3-204ENST00000441730 IGHDP01880 384 aa12.3□□□□□ -0.44
BRPF3-204ENST00000441730 PPP1R42Q7Z4L9 355 aa12.3□□□□□ -0.44
BRPF3-204ENST00000441730 SDR16C5Q8N3Y7 309 aa12.3□□□□□ -0.44
BRPF3-204ENST00000441730 LNPKQ9C0E8 428 aa12.3□□□□□ -0.44
BRPF3-204ENST00000441730 KDM4CQ9H3R0 1056 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms