RNA–Protein interactions for RNA: ENST00000441123.1

BRPF3-203, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 1 (best)

Gene BRPF3, Length 5,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-203ENST00000441123 BAG3O95817 575 aa14.83□□□□□ -0.04
BRPF3-203ENST00000441123 TNIP1Q15025 636 aa14.83□□□□□ -0.04
BRPF3-203ENST00000441123 LMBR1LQ6UX01 489 aa14.83□□□□□ -0.04
BRPF3-203ENST00000441123 ALG1Q9BT22 464 aa14.83□□□□□ -0.04
BRPF3-203ENST00000441123 DACT1Q9NYF0 836 aa14.83□□□□□ -0.04
BRPF3-203ENST00000441123 FAM135BQ49AJ0 1406 aa14.83□□□□□ -0.04
BRPF3-203ENST00000441123 MICU3Q86XE3 530 aa14.82□□□□□ -0.04
BRPF3-203ENST00000441123 CRNKL1Q9BZJ0 848 aaKnown RBP14.82□□□□□ -0.04
BRPF3-203ENST00000441123 TYRO3Q06418 890 aa14.82□□□□□ -0.04
BRPF3-203ENST00000441123 PKNOX2Q96KN3 472 aa14.82□□□□□ -0.04
BRPF3-203ENST00000441123 KAT14Q9H8E8 782 aa14.82□□□□□ -0.04
BRPF3-203ENST00000441123 DDX21Q9NR30 783 aaKnown RBP eCLIP14.82□□□□□ -0.04
BRPF3-203ENST00000441123 TMOD2Q9NZR1 351 aa14.82□□□□□ -0.04
BRPF3-203ENST00000441123 FBXO3Q9UK99 471 aa14.82□□□□□ -0.04
BRPF3-203ENST00000441123 RTL9Q8NET4 1388 aa14.82□□□□□ -0.04
BRPF3-203ENST00000441123 RBM5P52756 815 aaKnown RBP eCLIP14.82□□□□□ -0.04
BRPF3-203ENST00000441123 BMS1Q14692 1282 aaKnown RBP14.82□□□□□ -0.04
BRPF3-203ENST00000441123 WWC2Q6AWC2 1192 aa14.82□□□□□ -0.04
BRPF3-203ENST00000441123 DHX32Q7L7V1 743 aaKnown RBP14.82□□□□□ -0.04
BRPF3-203ENST00000441123 CACNA2D4Q7Z3S7 1137 aa14.82□□□□□ -0.04
BRPF3-203ENST00000441123 ESR2Q92731 530 aa14.82□□□□□ -0.04
BRPF3-203ENST00000441123 SRRTQ9BXP5 876 aaKnown RBP14.82□□□□□ -0.04
BRPF3-203ENST00000441123 RTL1A6NKG5 1358 aa14.82□□□□□ -0.04
BRPF3-203ENST00000441123 GOLGA6L7A0A1B0GV03 622 aa14.82□□□□□ -0.04
BRPF3-203ENST00000441123 EHMT1Q9H9B1 1298 aa14.82□□□□□ -0.04
BRPF3-203ENST00000441123 CALM1P0DP23 149 aa14.81□□□□□ -0.04
BRPF3-203ENST00000441123 CALM2P0DP24 149 aa14.81□□□□□ -0.04
BRPF3-203ENST00000441123 CALM3P0DP25 149 aa14.81□□□□□ -0.04
BRPF3-203ENST00000441123 HAND2P61296 217 aa14.81□□□□□ -0.04
BRPF3-203ENST00000441123 ALS2CR12Q96Q35 445 aa14.81□□□□□ -0.04
BRPF3-203ENST00000441123 ANKIB1Q9P2G1 1089 aa14.81□□□□□ -0.04
BRPF3-203ENST00000441123 PATL2C9JE40 543 aaKnown RBP14.81□□□□□ -0.04
BRPF3-203ENST00000441123 TUBB4BP68371 445 aa14.81□□□□□ -0.04
BRPF3-203ENST00000441123 TMEM132AQ24JP5 1023 aa14.81□□□□□ -0.04
BRPF3-203ENST00000441123 SNRKQ9NRH2 765 aa14.81□□□□□ -0.04
BRPF3-203ENST00000441123 KIF1BO60333 1816 aa14.81□□□□□ -0.04
BRPF3-203ENST00000441123 GPTP24298 496 aa14.81□□□□□ -0.04
BRPF3-203ENST00000441123 ZNF445P59923 1031 aa14.81□□□□□ -0.04
BRPF3-203ENST00000441123 PPP4R3BQ5MIZ7 849 aa14.81□□□□□ -0.04
BRPF3-203ENST00000441123 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.81□□□□□ -0.04
BRPF3-203ENST00000441123 ZGPATQ8N5A5 531 aaKnown RBP14.81□□□□□ -0.04
BRPF3-203ENST00000441123 LLPHQ9BRT6 129 aaKnown RBP14.81□□□□□ -0.04
BRPF3-203ENST00000441123 PANK2Q9BZ23 570 aa14.81□□□□□ -0.04
BRPF3-203ENST00000441123 PIBF1Q8WXW3 757 aa14.81□□□□□ -0.04
BRPF3-203ENST00000441123 RTN1Q16799 776 aa14.8□□□□□ -0.04
BRPF3-203ENST00000441123 ZSCAN29Q8IWY8 852 aaPredicted RBP14.8□□□□□ -0.04
BRPF3-203ENST00000441123 TRMT1Q9NXH9 659 aaKnown RBP14.8□□□□□ -0.04
BRPF3-203ENST00000441123 BIN1O00499 593 aa14.8□□□□□ -0.04
BRPF3-203ENST00000441123 ANKRD18AQ8IVF6 992 aa14.8□□□□□ -0.04
BRPF3-203ENST00000441123 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.8□□□□□ -0.049e-7■■■■■ 50.6
BRPF3-203ENST00000441123 ATP7BP35670 1465 aa14.8□□□□□ -0.04
BRPF3-203ENST00000441123 PAFAH1B1P43034 410 aa14.8□□□□□ -0.04
BRPF3-203ENST00000441123 GNAQP50148 359 aa14.8□□□□□ -0.04
BRPF3-203ENST00000441123 UBASH3AP57075 661 aa14.8□□□□□ -0.04
BRPF3-203ENST00000441123 PIP4K2BP78356 416 aa14.8□□□□□ -0.04
BRPF3-203ENST00000441123 AATKQ6ZMQ8 1374 aa14.8□□□□□ -0.04
BRPF3-203ENST00000441123 PRC1O43663 620 aa14.8□□□□□ -0.04
BRPF3-203ENST00000441123 ZFYVE16Q7Z3T8 1539 aa14.8□□□□□ -0.04
BRPF3-203ENST00000441123 IQGAP3Q86VI3 1631 aa14.79□□□□□ -0.04
BRPF3-203ENST00000441123 SPTLC2O15270 562 aa14.79□□□□□ -0.04
BRPF3-203ENST00000441123 NBPF7P0C2Y1 421 aaPredicted RBP14.79□□□□□ -0.04
BRPF3-203ENST00000441123 RPS6KB1P23443 525 aa14.79□□□□□ -0.04
BRPF3-203ENST00000441123 CUL5Q93034 780 aa14.79□□□□□ -0.04
BRPF3-203ENST00000441123 PA2G4Q9UQ80 394 aaKnown RBP14.79□□□□□ -0.04
BRPF3-203ENST00000441123 DMRT2Q9Y5R5 561 aa14.79□□□□□ -0.04
BRPF3-203ENST00000441123 POTEJP0CG39 1038 aa14.79□□□□□ -0.04
BRPF3-203ENST00000441123 SKILP12757 684 aa14.79□□□□□ -0.04
BRPF3-203ENST00000441123 KRT24Q2M2I5 525 aa14.79□□□□□ -0.04
BRPF3-203ENST00000441123 CALCOCO1Q9P1Z2 691 aa14.79□□□□□ -0.04
BRPF3-203ENST00000441123 SHTN1A0MZ66 631 aa14.79□□□□□ -0.04
BRPF3-203ENST00000441123 NAA15Q9BXJ9 866 aaKnown RBP14.79□□□□□ -0.04
BRPF3-203ENST00000441123 FAM107BQ9H098 131 aa14.79□□□□□ -0.04
BRPF3-203ENST00000441123 PCDH11XQ9BZA7 1347 aa14.78□□□□□ -0.04
BRPF3-203ENST00000441123 PCDH11YQ9BZA8 1340 aa14.78□□□□□ -0.04
BRPF3-203ENST00000441123 CBX1P83916 185 aa14.78□□□□□ -0.04
BRPF3-203ENST00000441123 CRACR2BQ8N4Y2 399 aaPredicted RBP14.78□□□□□ -0.04
BRPF3-203ENST00000441123 RPGRQ92834 1020 aaKnown RBP14.78□□□□□ -0.04
BRPF3-203ENST00000441123 PLEKHG3A1L390 1219 aa14.78□□□□□ -0.04
BRPF3-203ENST00000441123 TSPY2A6NKD2 308 aa14.78□□□□□ -0.04
BRPF3-203ENST00000441123 MPHOSPH10O00566 681 aaKnown RBP14.78□□□□□ -0.04
BRPF3-203ENST00000441123 SYT1P21579 422 aa14.78□□□□□ -0.04
BRPF3-203ENST00000441123 MTIF2P46199 727 aaKnown RBP14.78□□□□□ -0.04
BRPF3-203ENST00000441123 CCDC186Q7Z3E2 898 aa14.78□□□□□ -0.04
BRPF3-203ENST00000441123 BICC1Q9H694 974 aaKnown RBP14.78□□□□□ -0.04
BRPF3-203ENST00000441123 ZNF521Q96K83 1311 aa14.78□□□□□ -0.04
BRPF3-203ENST00000441123 UBA7P41226 1012 aa14.78□□□□□ -0.04
BRPF3-203ENST00000441123 TET3O43151 1660 aa14.78□□□□□ -0.04
BRPF3-203ENST00000441123 TFCP2Q12800 502 aa14.77□□□□□ -0.04
BRPF3-203ENST00000441123 SGSM2O43147 1006 aa14.77□□□□□ -0.04
BRPF3-203ENST00000441123 FAM193AP78312 1265 aa14.77□□□□□ -0.04
BRPF3-203ENST00000441123 DNAJC25Q9H1X3 360 aa14.77□□□□□ -0.04
BRPF3-203ENST00000441123 PTPDC1A2A3K4 754 aa14.77□□□□□ -0.05
BRPF3-203ENST00000441123 CETN2P41208 172 aa14.77□□□□□ -0.05
BRPF3-203ENST00000441123 CKAP4Q07065 602 aaKnown RBP14.77□□□□□ -0.05
BRPF3-203ENST00000441123 CCDC82Q8N4S0 544 aa14.77□□□□□ -0.05
BRPF3-203ENST00000441123 SEPT11Q9NVA2 429 aaKnown RBP14.77□□□□□ -0.05
BRPF3-203ENST00000441123 SLC4A4Q9Y6R1 1079 aa14.77□□□□□ -0.05
BRPF3-203ENST00000441123 GCP02774 474 aa14.77□□□□□ -0.05
BRPF3-203ENST00000441123 G2E3Q7L622 706 aa14.77□□□□□ -0.05
BRPF3-203ENST00000441123 METTL22Q9BUU2 404 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms