RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 CSADQ9Y600 493 aa13.96□□□□□ -0.17
NEK1-201ENST00000439128 GNAT2P19087 354 aa13.96□□□□□ -0.17
NEK1-201ENST00000439128 TCHPQ9BT92 498 aa13.96□□□□□ -0.17
NEK1-201ENST00000439128 KRT24Q2M2I5 525 aa13.96□□□□□ -0.18
NEK1-201ENST00000439128 CCDC148Q8NFR7 591 aa13.96□□□□□ -0.18
NEK1-201ENST00000439128 RRP36Q96EU6 259 aaKnown RBP13.96□□□□□ -0.18
NEK1-201ENST00000439128 ARHGEF10LQ9HCE6 1279 aa13.96□□□□□ -0.18
NEK1-201ENST00000439128 SH2B1Q9NRF2 756 aaPredicted RBP13.96□□□□□ -0.18
NEK1-201ENST00000439128 NUP62CLQ9H1M0 184 aa13.95□□□□□ -0.18
NEK1-201ENST00000439128 ORC3Q9UBD5 711 aaPredicted RBP13.95□□□□□ -0.18
NEK1-201ENST00000439128 SBNO2Q9Y2G9 1366 aa13.95□□□□□ -0.18
NEK1-201ENST00000439128 BACH1O14867 736 aa13.95□□□□□ -0.18
NEK1-201ENST00000439128 UBA7P41226 1012 aa13.95□□□□□ -0.18
NEK1-201ENST00000439128 CCDC174Q6PII3 467 aa13.95□□□□□ -0.18
NEK1-201ENST00000439128 CACNA2D4Q7Z3S7 1137 aa13.95□□□□□ -0.18
NEK1-201ENST00000439128 LGR6Q9HBX8 967 aa13.95□□□□□ -0.18
NEK1-201ENST00000439128 DDX21Q9NR30 783 aaKnown RBP eCLIP13.95□□□□□ -0.18
NEK1-201ENST00000439128 MMRN2Q9H8L6 949 aa13.95□□□□□ -0.18
NEK1-201ENST00000439128 C6orf50Q9HD87 102 aa13.95□□□□□ -0.18
NEK1-201ENST00000439128 KLF18A0A0U1RQI7 1052 aa13.95□□□□□ -0.18
NEK1-201ENST00000439128 FGFR1OPO95684 399 aaKnown RBP13.95□□□□□ -0.18
NEK1-201ENST00000439128 ANAPC15P60006 121 aa13.95□□□□□ -0.18
NEK1-201ENST00000439128 SEPT7Q16181 437 aaKnown RBP13.95□□□□□ -0.18
NEK1-201ENST00000439128 SEPT12Q8IYM1 358 aa13.95□□□□□ -0.18
NEK1-201ENST00000439128 BICC1Q9H694 974 aaKnown RBP13.95□□□□□ -0.18
NEK1-201ENST00000439128 IRX3P78415 501 aaPredicted RBP13.95□□□□□ -0.18
NEK1-201ENST00000439128 RTN1Q16799 776 aa13.95□□□□□ -0.18
NEK1-201ENST00000439128 TMTC2Q8N394 836 aa13.95□□□□□ -0.18
NEK1-201ENST00000439128 ACBD3Q9H3P7 528 aa13.95□□□□□ -0.18
NEK1-201ENST00000439128 ASXL1Q8IXJ9 1541 aa13.95□□□□□ -0.18
NEK1-201ENST00000439128 PRAG1Q86YV5 1406 aa13.94□□□□□ -0.18
NEK1-201ENST00000439128 ZBTB43O43298 467 aa13.94□□□□□ -0.18
NEK1-201ENST00000439128 TAF5LO75529 589 aa13.94□□□□□ -0.18
NEK1-201ENST00000439128 NLGN1Q8N2Q7 840 aa13.94□□□□□ -0.18
NEK1-201ENST00000439128 CCP110O43303 1012 aa13.94□□□□□ -0.18
NEK1-201ENST00000439128 SULF1Q8IWU6 871 aa13.94□□□□□ -0.18
NEK1-201ENST00000439128 COL17A1Q9UMD9 1497 aaPredicted RBP13.94□□□□□ -0.18
NEK1-201ENST00000439128 PKD2L1Q9P0L9 805 aa13.94□□□□□ -0.18
NEK1-201ENST00000439128 NBPF7P0C2Y1 421 aaPredicted RBP13.94□□□□□ -0.18
NEK1-201ENST00000439128 CAMK4Q16566 473 aa13.94□□□□□ -0.18
NEK1-201ENST00000439128 MCMDC2Q4G0Z9 681 aa13.94□□□□□ -0.18
NEK1-201ENST00000439128 C20orf194Q5TEA3 1177 aa13.93□□□□□ -0.18
NEK1-201ENST00000439128 FAM212AQ96EL1 285 aa13.93□□□□□ -0.18
NEK1-201ENST00000439128 SMTNL1A8MU46 457 aa13.93□□□□□ -0.18
NEK1-201ENST00000439128 PDIA4P13667 645 aaKnown RBP13.93□□□□□ -0.18
NEK1-201ENST00000439128 JAKMIP3Q5VZ66 844 aa13.93□□□□□ -0.18
NEK1-201ENST00000439128 PHACTR3Q96KR7 559 aa13.93□□□□□ -0.18
NEK1-201ENST00000439128 PANK2Q9BZ23 570 aa13.93□□□□□ -0.18
NEK1-201ENST00000439128 PHACTR2O75167 634 aa13.93□□□□□ -0.18
NEK1-201ENST00000439128 NASPP49321 788 aaPredicted RBP13.93□□□□□ -0.18
NEK1-201ENST00000439128 CCDC40Q4G0X9 1142 aa13.93□□□□□ -0.18
NEK1-201ENST00000439128 ARGLU1Q9NWB6 273 aaPredicted RBP13.93□□□□□ -0.18
NEK1-201ENST00000439128 ZFYVE9O95405 1425 aa13.93□□□□□ -0.18
NEK1-201ENST00000439128 PUM3Q15397 648 aaKnown RBP13.93□□□□□ -0.18
NEK1-201ENST00000439128 KIAA1328Q86T90 577 aa13.93□□□□□ -0.18
NEK1-201ENST00000439128 CNKSR1Q969H4 720 aa13.93□□□□□ -0.18
NEK1-201ENST00000439128 ZNF354CQ86Y25 554 aa13.92□□□□□ -0.18
NEK1-201ENST00000439128 LRRC2Q9BYS8 371 aa13.92□□□□□ -0.18
NEK1-201ENST00000439128 HMG20BQ9P0W2 317 aa13.92□□□□□ -0.18
NEK1-201ENST00000439128 ERVV-2B6SEH9 535 aa13.92□□□□□ -0.18
NEK1-201ENST00000439128 TRAK2O60296 914 aa13.92□□□□□ -0.18
NEK1-201ENST00000439128 USP48Q86UV5 1035 aa13.92□□□□□ -0.18
NEK1-201ENST00000439128 CNNM3Q8NE01 707 aa13.92□□□□□ -0.18
NEK1-201ENST00000439128 PUS7Q96PZ0 661 aaKnown RBP13.92□□□□□ -0.18
NEK1-201ENST00000439128 DISP1Q96F81 1524 aa13.92□□□□□ -0.18
NEK1-201ENST00000439128 PIK3C2GO75747 1445 aa13.92□□□□□ -0.18
NEK1-201ENST00000439128 RNF113AO15541 343 aaKnown RBP13.92□□□□□ -0.18
NEK1-201ENST00000439128 ATP8B2P98198 1209 aa13.92□□□□□ -0.18
NEK1-201ENST00000439128 UNC5CLQ8IV45 518 aa13.92□□□□□ -0.18
NEK1-201ENST00000439128 TAF4BQ92750 862 aa13.92□□□□□ -0.18
NEK1-201ENST00000439128 FAM177A1Q8N128 213 aaPredicted RBP13.92□□□□□ -0.18
NEK1-201ENST00000439128 MRPL50Q8N5N7 158 aaKnown RBP13.92□□□□□ -0.18
NEK1-201ENST00000439128 CCDC191Q8NCU4 936 aa13.92□□□□□ -0.18
NEK1-201ENST00000439128 GPCPD1Q9NPB8 672 aa13.92□□□□□ -0.18
NEK1-201ENST00000439128 LIMCH1Q9UPQ0 1083 aa13.92□□□□□ -0.18
NEK1-201ENST00000439128 CFAP74Q9C0B2 1584 aa13.92□□□□□ -0.18
NEK1-201ENST00000439128 EP400NLQ6ZTU2 488 aa13.91□□□□□ -0.18
NEK1-201ENST00000439128 WDR66Q8TBY9 1149 aa13.91□□□□□ -0.18
NEK1-201ENST00000439128 EDC4Q6P2E9 1401 aaKnown RBP13.91□□□□□ -0.18
NEK1-201ENST00000439128 PRC1O43663 620 aa13.91□□□□□ -0.18
NEK1-201ENST00000439128 VPS36Q86VN1 386 aa13.91□□□□□ -0.18
NEK1-201ENST00000439128 METTL22Q9BUU2 404 aaPredicted RBP13.91□□□□□ -0.18
NEK1-201ENST00000439128 PTPRKQ15262 1439 aa13.91□□□□□ -0.18
NEK1-201ENST00000439128 HSP90B2PQ58FF3 399 aa13.91□□□□□ -0.18
NEK1-201ENST00000439128 GTF2IP78347 998 aa13.9□□□□□ -0.18
NEK1-201ENST00000439128 DOK7Q18PE1 504 aa13.9□□□□□ -0.18
NEK1-201ENST00000439128 LRRC27Q9C0I9 530 aa13.9□□□□□ -0.18
NEK1-201ENST00000439128 ABT1Q9ULW3 272 aaKnown RBP13.9□□□□□ -0.18
NEK1-201ENST00000439128 MBD4O95243 580 aa13.9□□□□□ -0.18
NEK1-201ENST00000439128 USPL1Q5W0Q7 1092 aa13.9□□□□□ -0.18
NEK1-201ENST00000439128 CFAP100Q494V2 611 aa13.9□□□□□ -0.18
NEK1-201ENST00000439128 ZNF594Q96JF6 807 aaPredicted RBP13.9□□□□□ -0.18
NEK1-201ENST00000439128 MACROD2A1Z1Q3 448 aa13.9□□□□□ -0.18
NEK1-201ENST00000439128 PTPDC1A2A3K4 754 aa13.9□□□□□ -0.18
NEK1-201ENST00000439128 TNFAIP1Q13829 316 aa13.9□□□□□ -0.18
NEK1-201ENST00000439128 STX6O43752 255 aa13.9□□□□□ -0.18
NEK1-201ENST00000439128 PARP1P09874 1014 aaKnown RBP13.9□□□□□ -0.18
NEK1-201ENST00000439128 CNGA1P29973 690 aa13.9□□□□□ -0.18
NEK1-201ENST00000439128 LRSAM1Q6UWE0 723 aa13.9□□□□□ -0.18
NEK1-201ENST00000439128 PAGR1Q9BTK6 254 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms