RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 MED26O95402 600 aa5.62□□□□□ -1.51
HMGB1P12-201ENST00000438594 IGFBP4P22692 258 aa5.62□□□□□ -1.51
HMGB1P12-201ENST00000438594 SIK1P57059 783 aa5.62□□□□□ -1.51
HMGB1P12-201ENST00000438594 RGL4Q8IZJ4 473 aa5.62□□□□□ -1.51
HMGB1P12-201ENST00000438594 TMEM130Q8N3G9 435 aa5.62□□□□□ -1.51
HMGB1P12-201ENST00000438594 RTCBQ9Y3I0 505 aaKnown RBP5.62□□□□□ -1.51
HMGB1P12-201ENST00000438594 C11orf91Q3C1V1 193 aa5.61□□□□□ -1.51
HMGB1P12-201ENST00000438594 DCAF11Q8TEB1 546 aa5.61□□□□□ -1.51
HMGB1P12-201ENST00000438594 DHX15O43143 795 aaKnown RBP5.6□□□□□ -1.51
HMGB1P12-201ENST00000438594 CDC25BP30305 580 aa5.6□□□□□ -1.51
HMGB1P12-201ENST00000438594 GRIK1P39086 918 aa5.6□□□□□ -1.51
HMGB1P12-201ENST00000438594 SETDB1Q15047 1291 aa5.6□□□□□ -1.51
HMGB1P12-201ENST00000438594 ACAD11Q709F0 780 aa5.6□□□□□ -1.51
HMGB1P12-201ENST00000438594 QTRT2Q9H974 415 aaKnown RBP5.6□□□□□ -1.51
HMGB1P12-201ENST00000438594 TRIM33Q9UPN9 1127 aa5.6□□□□□ -1.51
HMGB1P12-201ENST00000438594 MTMR7Q9Y216 660 aa5.6□□□□□ -1.51
HMGB1P12-201ENST00000438594 LINC01387J3KSC0 135 aa5.59□□□□□ -1.51
HMGB1P12-201ENST00000438594 MMP20O60882 483 aa5.59□□□□□ -1.51
HMGB1P12-201ENST00000438594 CRTC2Q53ET0 693 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P12-201ENST00000438594 TXNDC11Q6PKC3 985 aa5.59□□□□□ -1.51
HMGB1P12-201ENST00000438594 MAP4K3Q8IVH8 894 aa5.59□□□□□ -1.51
HMGB1P12-201ENST00000438594 UTP4Q969X6 686 aaKnown RBP5.59□□□□□ -1.51
HMGB1P12-201ENST00000438594 FMNL2Q96PY5 1086 aa5.59□□□□□ -1.51
HMGB1P12-201ENST00000438594 UBL7Q96S82 380 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P12-201ENST00000438594 SRA1Q9HD15 236 aaKnown RBP5.59□□□□□ -1.51
HMGB1P12-201ENST00000438594 PPME1Q9Y570 386 aa5.59□□□□□ -1.51
HMGB1P12-201ENST00000438594 MAFBQ9Y5Q3 323 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P12-201ENST00000438594 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.58□□□□□ -1.52
HMGB1P12-201ENST00000438594 TREML1Q86YW5 311 aa5.58□□□□□ -1.52
HMGB1P12-201ENST00000438594 ANKMY2Q8IV38 441 aa5.58□□□□□ -1.52
HMGB1P12-201ENST00000438594 ZNF428Q96B54 188 aa5.58□□□□□ -1.52
HMGB1P12-201ENST00000438594 TRAIPQ9BWF2 469 aa5.58□□□□□ -1.52
HMGB1P12-201ENST00000438594 CEP41Q9BYV8 373 aa5.58□□□□□ -1.52
HMGB1P12-201ENST00000438594 LACRTQ9GZZ8 138 aa5.58□□□□□ -1.52
HMGB1P12-201ENST00000438594 C11orf16Q9NQ32 467 aa5.58□□□□□ -1.52
HMGB1P12-201ENST00000438594 KIAA1324LA8MWY0 1029 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P12-201ENST00000438594 USP17L15C9J2P7 530 aa5.57□□□□□ -1.52
HMGB1P12-201ENST00000438594 USP17L10C9JJH3 530 aa5.57□□□□□ -1.52
HMGB1P12-201ENST00000438594 USP17L13C9JLJ4 530 aa5.57□□□□□ -1.52
HMGB1P12-201ENST00000438594 USP17L12C9JPN9 530 aa5.57□□□□□ -1.52
HMGB1P12-201ENST00000438594 USP17L11C9JVI0 530 aa5.57□□□□□ -1.52
HMGB1P12-201ENST00000438594 USP17L21D6R901 530 aa5.57□□□□□ -1.52
HMGB1P12-201ENST00000438594 USP17L18D6R9N7 530 aa5.57□□□□□ -1.52
HMGB1P12-201ENST00000438594 USP17L22D6RA61 530 aa5.57□□□□□ -1.52
HMGB1P12-201ENST00000438594 USP17L17D6RBQ6 530 aa5.57□□□□□ -1.52
HMGB1P12-201ENST00000438594 USP17L19D6RCP7 530 aa5.57□□□□□ -1.52
HMGB1P12-201ENST00000438594 USP17L20D6RJB6 530 aa5.57□□□□□ -1.52
HMGB1P12-201ENST00000438594 OPLAHO14841 1288 aa5.57□□□□□ -1.52
HMGB1P12-201ENST00000438594 WISP1O95388 367 aa5.57□□□□□ -1.52
HMGB1P12-201ENST00000438594 USP17L24Q0WX57 530 aa5.57□□□□□ -1.52
HMGB1P12-201ENST00000438594 PTK7Q13308 1070 aa5.57□□□□□ -1.52
HMGB1P12-201ENST00000438594 Q6ZS46 218 aa5.57□□□□□ -1.52
HMGB1P12-201ENST00000438594 GLMNQ92990 594 aa5.57□□□□□ -1.52
HMGB1P12-201ENST00000438594 MUC3BQ9H195 1237 aa5.57□□□□□ -1.52
HMGB1P12-201ENST00000438594 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.57□□□□□ -1.52
HMGB1P12-201ENST00000438594 HMX2A2RU54 273 aa5.56□□□□□ -1.52
HMGB1P12-201ENST00000438594 FOXO3O43524 673 aa5.56□□□□□ -1.52
HMGB1P12-201ENST00000438594 CD68P34810 354 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P12-201ENST00000438594 RBM25P49756 843 aaKnown RBP5.56□□□□□ -1.52
HMGB1P12-201ENST00000438594 NFIAQ12857 509 aa5.56□□□□□ -1.52
HMGB1P12-201ENST00000438594 FLIIQ13045 1269 aa5.56□□□□□ -1.52
HMGB1P12-201ENST00000438594 INTS5Q6P9B9 1019 aaKnown RBP5.56□□□□□ -1.52
HMGB1P12-201ENST00000438594 ZDHHC13Q8IUH4 622 aa5.56□□□□□ -1.52
HMGB1P12-201ENST00000438594 TRIM42Q8IWZ5 723 aa5.56□□□□□ -1.52
HMGB1P12-201ENST00000438594 ARMC10Q8N2F6 343 aa5.56□□□□□ -1.52
HMGB1P12-201ENST00000438594 CCDC82Q8N4S0 544 aa5.56□□□□□ -1.52
HMGB1P12-201ENST00000438594 GALNT11Q8NCW6 608 aa5.56□□□□□ -1.52
HMGB1P12-201ENST00000438594 FOXD4L4Q8WXT5 416 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P12-201ENST00000438594 CARD10Q9BWT7 1032 aa5.56□□□□□ -1.52
HMGB1P12-201ENST00000438594 KCNF1Q9H3M0 494 aa5.56□□□□□ -1.52
HMGB1P12-201ENST00000438594 C7orf69Q9H7B7 122 aa5.56□□□□□ -1.52
HMGB1P12-201ENST00000438594 SART1O43290 800 aaKnown RBP5.55□□□□□ -1.52
HMGB1P12-201ENST00000438594 ADAMTS4O75173 837 aa5.55□□□□□ -1.52
HMGB1P12-201ENST00000438594 EGFRP00533 1210 aa5.55□□□□□ -1.52
HMGB1P12-201ENST00000438594 DUOXA2Q1HG44 320 aa5.55□□□□□ -1.52
HMGB1P12-201ENST00000438594 CEP135Q66GS9 1140 aa5.55□□□□□ -1.52
HMGB1P12-201ENST00000438594 SPACA7Q96KW9 195 aa5.55□□□□□ -1.52
HMGB1P12-201ENST00000438594 VRTNQ9H8Y1 702 aa5.55□□□□□ -1.52
HMGB1P12-201ENST00000438594 LRFN2Q9ULH4 789 aa5.55□□□□□ -1.52
HMGB1P12-201ENST00000438594 FAM177BA6PVY3 158 aa5.54□□□□□ -1.52
HMGB1P12-201ENST00000438594 SMNDC1O75940 238 aaKnown RBP eCLIP5.54□□□□□ -1.52
HMGB1P12-201ENST00000438594 WNT11O96014 354 aa5.54□□□□□ -1.52
HMGB1P12-201ENST00000438594 LMOD1P29536 600 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P12-201ENST00000438594 ATP11AP98196 1134 aa5.54□□□□□ -1.52
HMGB1P12-201ENST00000438594 FZD5Q13467 585 aa5.54□□□□□ -1.52
HMGB1P12-201ENST00000438594 TMCO4Q5TGY1 634 aa5.54□□□□□ -1.52
HMGB1P12-201ENST00000438594 RNF43Q68DV7 783 aa5.54□□□□□ -1.52
HMGB1P12-201ENST00000438594 FAM117BQ6P1L5 589 aa5.54□□□□□ -1.52
HMGB1P12-201ENST00000438594 CACTIN-AS1Q8N1I8 211 aa5.54□□□□□ -1.52
HMGB1P12-201ENST00000438594 MYO19Q96H55 970 aa5.54□□□□□ -1.52
HMGB1P12-201ENST00000438594 DBNDD2Q9BQY9 259 aa5.54□□□□□ -1.52
HMGB1P12-201ENST00000438594 KCNK4Q9NYG8 393 aa5.54□□□□□ -1.52
HMGB1P12-201ENST00000438594 KCNMB2Q9Y691 235 aa5.54□□□□□ -1.52
HMGB1P12-201ENST00000438594 FAM196BA6NMK8 535 aa5.53□□□□□ -1.52
HMGB1P12-201ENST00000438594 SPINK2P20155 84 aa5.53□□□□□ -1.52
HMGB1P12-201ENST00000438594 CDC27P30260 824 aa5.53□□□□□ -1.52
HMGB1P12-201ENST00000438594 WEE1P30291 646 aa5.53□□□□□ -1.52
HMGB1P12-201ENST00000438594 SOX18P35713 384 aa5.53□□□□□ -1.52
HMGB1P12-201ENST00000438594 SCNN1AP37088 669 aa5.53□□□□□ -1.52
HMGB1P12-201ENST00000438594 MFAP1P55081 439 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms