RNA–Protein interactions for RNA: ENST00000438508.1

HMGN1P6-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 6, humanhuman

BASIC

Gene HMGN1P6, Length 291 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P6-201ENST00000438508 USP6P35125 1406 aa9.31□□□□□ -0.92
HMGN1P6-201ENST00000438508 LILRB3O75022 631 aa9.31□□□□□ -0.92
HMGN1P6-201ENST00000438508 TTLL12Q14166 644 aaPredicted RBP9.31□□□□□ -0.92
HMGN1P6-201ENST00000438508 NBPF20Q3BBV1 942 aa9.31□□□□□ -0.92
HMGN1P6-201ENST00000438508 NME9Q86XW9 330 aa9.31□□□□□ -0.92
HMGN1P6-201ENST00000438508 WWC1Q8IX03 1113 aa9.31□□□□□ -0.92
HMGN1P6-201ENST00000438508 CCDC146Q8IYE0 955 aa9.31□□□□□ -0.92
HMGN1P6-201ENST00000438508 TCP11L2Q8N4U5 519 aa9.31□□□□□ -0.92
HMGN1P6-201ENST00000438508 PPP4R2Q9NY27 417 aa9.31□□□□□ -0.92
HMGN1P6-201ENST00000438508 RCAN3Q9UKA8 241 aa9.31□□□□□ -0.92
HMGN1P6-201ENST00000438508 USP31Q70CQ4 1352 aa9.31□□□□□ -0.92
HMGN1P6-201ENST00000438508 NRKQ7Z2Y5 1582 aa9.31□□□□□ -0.92
HMGN1P6-201ENST00000438508 E9PSI1 815 aa9.3□□□□□ -0.92
HMGN1P6-201ENST00000438508 RSPO4Q2I0M5 234 aaPredicted RBP9.3□□□□□ -0.92
HMGN1P6-201ENST00000438508 NKAPLQ5M9Q1 402 aa9.3□□□□□ -0.92
HMGN1P6-201ENST00000438508 ZBTB33Q86T24 672 aa9.3□□□□□ -0.92
HMGN1P6-201ENST00000438508 HELBQ8NG08 1087 aaPredicted RBP9.3□□□□□ -0.92
HMGN1P6-201ENST00000438508 TSC1Q92574 1164 aa9.3□□□□□ -0.92
HMGN1P6-201ENST00000438508 NUCKS1Q9H1E3 243 aaKnown RBP9.3□□□□□ -0.92
HMGN1P6-201ENST00000438508 NWD1Q149M9 1564 aa9.29□□□□□ -0.92
HMGN1P6-201ENST00000438508 NALCNQ8IZF0 1738 aa9.29□□□□□ -0.92
HMGN1P6-201ENST00000438508 U2AF1L5P0DN76 240 aaPredicted RBP9.29□□□□□ -0.92
HMGN1P6-201ENST00000438508 U2AF1Q01081 240 aaKnown RBP eCLIP9.29□□□□□ -0.92
HMGN1P6-201ENST00000438508 GAS2L1Q99501 681 aaPredicted RBP9.29□□□□□ -0.92
HMGN1P6-201ENST00000438508 GPSM3Q9Y4H4 160 aa9.29□□□□□ -0.92
HMGN1P6-201ENST00000438508 NCOA3Q9Y6Q9 1424 aa9.29□□□□□ -0.92
HMGN1P6-201ENST00000438508 USP54Q70EL1 1684 aa9.29□□□□□ -0.92
HMGN1P6-201ENST00000438508 ZC3H4Q9UPT8 1303 aaKnown RBP9.29□□□□□ -0.92
HMGN1P6-201ENST00000438508 NKTRP30414 1462 aaKnown RBP9.28□□□□□ -0.92
HMGN1P6-201ENST00000438508 IQSEC2Q5JU85 1478 aa9.28□□□□□ -0.92
HMGN1P6-201ENST00000438508 TULP1O00294 542 aaPredicted RBP9.28□□□□□ -0.92
HMGN1P6-201ENST00000438508 IL13P35225 146 aa9.28□□□□□ -0.92
HMGN1P6-201ENST00000438508 GATA4P43694 442 aa9.28□□□□□ -0.92
HMGN1P6-201ENST00000438508 SLCO4C1Q6ZQN7 724 aa9.28□□□□□ -0.92
HMGN1P6-201ENST00000438508 NGDNQ8NEJ9 315 aaKnown RBP9.28□□□□□ -0.92
HMGN1P6-201ENST00000438508 OVOS2A0A0J9YW53 1432 aa9.28□□□□□ -0.92
HMGN1P6-201ENST00000438508 OVOS2Q6IE36 1432 aa9.28□□□□□ -0.92
HMGN1P6-201ENST00000438508 ADGRL3Q9HAR2 1447 aa9.28□□□□□ -0.92
HMGN1P6-201ENST00000438508 CDK12Q9NYV4 1490 aaPredicted RBP9.28□□□□□ -0.92
HMGN1P6-201ENST00000438508 ERVH48-1M5A8F1 160 aa9.27□□□□□ -0.93
HMGN1P6-201ENST00000438508 DGKGP49619 791 aa9.27□□□□□ -0.93
HMGN1P6-201ENST00000438508 NBPF11Q86T75 865 aa9.27□□□□□ -0.93
HMGN1P6-201ENST00000438508 OCSTAMPQ9BR26 566 aa9.27□□□□□ -0.93
HMGN1P6-201ENST00000438508 FKBPLQ9UIM3 349 aa9.27□□□□□ -0.93
HMGN1P6-201ENST00000438508 PHF24Q9UPV7 400 aa9.27□□□□□ -0.93
HMGN1P6-201ENST00000438508 F11P03951 625 aa9.26□□□□□ -0.93
HMGN1P6-201ENST00000438508 FBLN1P23142 703 aa9.26□□□□□ -0.93
HMGN1P6-201ENST00000438508 TMPOP42166 694 aaKnown RBP9.26□□□□□ -0.93
HMGN1P6-201ENST00000438508 RRP1P56182 461 aaKnown RBP9.26□□□□□ -0.93
HMGN1P6-201ENST00000438508 QPCTQ16769 361 aa9.26□□□□□ -0.93
HMGN1P6-201ENST00000438508 PMFBP1Q8TBY8 1022 aa9.26□□□□□ -0.93
HMGN1P6-201ENST00000438508 BTBD6Q96KE9 485 aa9.26□□□□□ -0.93
HMGN1P6-201ENST00000438508 LRRC7Q96NW7 1537 aa9.26□□□□□ -0.93
HMGN1P6-201ENST00000438508 KIF24Q5T7B8 1368 aa9.25□□□□□ -0.93
HMGN1P6-201ENST00000438508 NUTM2BA6NNL0 878 aaPredicted RBP9.25□□□□□ -0.93
HMGN1P6-201ENST00000438508 NUTM2EB1AL46 878 aaPredicted RBP9.25□□□□□ -0.93
HMGN1P6-201ENST00000438508 SPATA31C2B4DYI2 1134 aa9.25□□□□□ -0.93
HMGN1P6-201ENST00000438508 U2SURPO15042 1029 aaKnown RBP9.25□□□□□ -0.93
HMGN1P6-201ENST00000438508 POU4F2Q12837 409 aa9.25□□□□□ -0.93
HMGN1P6-201ENST00000438508 LCE1DQ5T752 114 aa9.25□□□□□ -0.93
HMGN1P6-201ENST00000438508 PROSER2Q86WR7 435 aaPredicted RBP9.25□□□□□ -0.93
HMGN1P6-201ENST00000438508 NUTM2AQ8IVF1 878 aaPredicted RBP9.25□□□□□ -0.93
HMGN1P6-201ENST00000438508 RSPH6AQ9H0K4 717 aa9.25□□□□□ -0.93
HMGN1P6-201ENST00000438508 C19orf44Q9H6X5 657 aa9.25□□□□□ -0.93
HMGN1P6-201ENST00000438508 IL16Q14005 1332 aa9.25□□□□□ -0.93
HMGN1P6-201ENST00000438508 ESPNB1AK53 854 aa9.24□□□□□ -0.93
HMGN1P6-201ENST00000438508 THBS1P07996 1170 aa9.24□□□□□ -0.93
HMGN1P6-201ENST00000438508 CT47B1P0C2W7 299 aaPredicted RBP9.24□□□□□ -0.93
HMGN1P6-201ENST00000438508 AMPD1P23109 780 aa9.24□□□□□ -0.93
HMGN1P6-201ENST00000438508 NBPF10Q6P3W6 841 aaKnown RBP9.24□□□□□ -0.93
HMGN1P6-201ENST00000438508 NBPF15Q8N660 670 aa9.24□□□□□ -0.93
HMGN1P6-201ENST00000438508 GRIP2Q9C0E4 1043 aa9.24□□□□□ -0.93
HMGN1P6-201ENST00000438508 MARF1Q9Y4F3 1742 aaKnown RBP9.23□□□□□ -0.93
HMGN1P6-201ENST00000438508 IRX6P78412 446 aaPredicted RBP9.23□□□□□ -0.93
HMGN1P6-201ENST00000438508 PTK2Q05397 1052 aa9.23□□□□□ -0.93
HMGN1P6-201ENST00000438508 RRS1Q15050 365 aaKnown RBP9.23□□□□□ -0.93
HMGN1P6-201ENST00000438508 CSPP1Q1MSJ5 1256 aa9.23□□□□□ -0.93
HMGN1P6-201ENST00000438508 PIK3C2AO00443 1686 aa9.23□□□□□ -0.93
HMGN1P6-201ENST00000438508 STRCP1A6NGW2 1772 aa9.22□□□□□ -0.93
HMGN1P6-201ENST00000438508 PPM1GO15355 546 aaPredicted RBP9.22□□□□□ -0.93
HMGN1P6-201ENST00000438508 EPXP11678 715 aa9.22□□□□□ -0.93
HMGN1P6-201ENST00000438508 RIPK4P57078 832 aa9.22□□□□□ -0.93
HMGN1P6-201ENST00000438508 PPP2R2DQ66LE6 453 aa9.22□□□□□ -0.93
HMGN1P6-201ENST00000438508 LIMD1Q9UGP4 676 aa9.22□□□□□ -0.93
HMGN1P6-201ENST00000438508 DLG5Q8TDM6 1919 aa9.22□□□□□ -0.93
HMGN1P6-201ENST00000438508 MAPK8IP3Q9UPT6 1336 aa9.22□□□□□ -0.93
HMGN1P6-201ENST00000438508 ATP5J2-PTCD1G3V325 749 aa9.21□□□□□ -0.94
HMGN1P6-201ENST00000438508 NEFMP07197 916 aa9.21□□□□□ -0.94
HMGN1P6-201ENST00000438508 PRKAR2BP31323 418 aa9.21□□□□□ -0.94
HMGN1P6-201ENST00000438508 EIF4A2Q14240 407 aaKnown RBP9.21□□□□□ -0.94
HMGN1P6-201ENST00000438508 NEUROD2Q15784 382 aa9.21□□□□□ -0.94
HMGN1P6-201ENST00000438508 NFE2L2Q16236 605 aa9.21□□□□□ -0.94
HMGN1P6-201ENST00000438508 SEPT12Q8IYM1 358 aa9.21□□□□□ -0.94
HMGN1P6-201ENST00000438508 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.21□□□□□ -0.94
HMGN1P6-201ENST00000438508 ADAM32Q8TC27 787 aa9.21□□□□□ -0.94
HMGN1P6-201ENST00000438508 MYH16Q9H6N6 1097 aa9.21□□□□□ -0.94
HMGN1P6-201ENST00000438508 RRP7AQ9Y3A4 280 aaKnown RBP9.21□□□□□ -0.94
HMGN1P6-201ENST00000438508 RGPD1P0DJD0 1748 aa9.21□□□□□ -0.94
HMGN1P6-201ENST00000438508 PEAK1Q9H792 1746 aa9.21□□□□□ -0.94
HMGN1P6-201ENST00000438508 STRCQ7RTU9 1775 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms