RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 XDHP47989 1333 aa20.54■□□□□ 0.88
CTSD-205ENST00000438213 GNAI3P08754 354 aa20.54■□□□□ 0.88
CTSD-205ENST00000438213 ATP2B4P23634 1241 aa20.54■□□□□ 0.88
CTSD-205ENST00000438213 RABL6Q3YEC7 729 aaPredicted RBP20.54■□□□□ 0.88
CTSD-205ENST00000438213 FTSJ3Q8IY81 847 aaKnown RBP20.54■□□□□ 0.88
CTSD-205ENST00000438213 TBC1D16Q8TBP0 767 aa20.54■□□□□ 0.88
CTSD-205ENST00000438213 YTHDC1Q96MU7 727 aaKnown RBP20.54■□□□□ 0.88
CTSD-205ENST00000438213 ZC3H12CQ9C0D7 883 aaKnown RBP20.54■□□□□ 0.88
CTSD-205ENST00000438213 ANKRD2Q9GZV1 360 aa20.54■□□□□ 0.88
CTSD-205ENST00000438213 RCAN3Q9UKA8 241 aa20.54■□□□□ 0.88
CTSD-205ENST00000438213 UFL1O94874 794 aa20.53■□□□□ 0.88
CTSD-205ENST00000438213 MS4A1P11836 297 aa20.53■□□□□ 0.88
CTSD-205ENST00000438213 DZIP1LQ8IYY4 767 aaKnown RBP20.53■□□□□ 0.88
CTSD-205ENST00000438213 RRAGCQ9HB90 399 aa20.53■□□□□ 0.88
CTSD-205ENST00000438213 ZNRF3Q9ULT6 936 aa20.53■□□□□ 0.88
CTSD-205ENST00000438213 LDHAL6AQ6ZMR3 332 aa20.52■□□□□ 0.88
CTSD-205ENST00000438213 NMRK2Q9NPI5 230 aa20.52■□□□□ 0.88
CTSD-205ENST00000438213 G3V3G9 751 aa20.51■□□□□ 0.87
CTSD-205ENST00000438213 RIMBP2O15034 1052 aa20.51■□□□□ 0.87
CTSD-205ENST00000438213 DDNO94850 711 aaPredicted RBP20.51■□□□□ 0.87
CTSD-205ENST00000438213 VEGFAP15692 232 aaPredicted RBP20.51■□□□□ 0.87
CTSD-205ENST00000438213 DCAF8Q5TAQ9 597 aa20.51■□□□□ 0.87
CTSD-205ENST00000438213 ANKRD44Q8N8A2 993 aa20.51■□□□□ 0.87
CTSD-205ENST00000438213 CNNM1Q9NRU3 951 aa20.51■□□□□ 0.87
CTSD-205ENST00000438213 LEMD3Q9Y2U8 911 aa20.51■□□□□ 0.87
CTSD-205ENST00000438213 C16orf71Q8IYS4 520 aaPredicted RBP20.5■□□□□ 0.87
CTSD-205ENST00000438213 ZNF594Q96JF6 807 aaPredicted RBP20.5■□□□□ 0.87
CTSD-205ENST00000438213 MEIS3Q99687 375 aa20.5■□□□□ 0.87
CTSD-205ENST00000438213 TNNQ9UQP3 1299 aa20.5■□□□□ 0.87
CTSD-205ENST00000438213 COL4A1P02462 1669 aa20.5■□□□□ 0.87
CTSD-205ENST00000438213 LRRC37AA6NMS7 1700 aa20.5■□□□□ 0.87
CTSD-205ENST00000438213 CHRNDQ07001 517 aa20.49■□□□□ 0.87
CTSD-205ENST00000438213 GPC2Q8N158 579 aa20.49■□□□□ 0.87
CTSD-205ENST00000438213 TMEM57Q8N5G2 664 aa20.49■□□□□ 0.87
CTSD-205ENST00000438213 KIF3CO14782 793 aa20.48■□□□□ 0.87
CTSD-205ENST00000438213 KCNJ4P48050 445 aa20.48■□□□□ 0.87
CTSD-205ENST00000438213 TNIP1Q15025 636 aa20.48■□□□□ 0.87
CTSD-205ENST00000438213 LRRFIP2Q9Y608 721 aaKnown RBP20.48■□□□□ 0.87
CTSD-205ENST00000438213 GJA3Q9Y6H8 435 aa20.48■□□□□ 0.87
CTSD-205ENST00000438213 ZNF541Q9H0D2 1346 aa20.48■□□□□ 0.87
CTSD-205ENST00000438213 TIAM2Q8IVF5 1701 aa20.47■□□□□ 0.87
CTSD-205ENST00000438213 IQCA1LA6NCM1 817 aa20.46■□□□□ 0.87
CTSD-205ENST00000438213 GNAI2P04899 355 aa20.46■□□□□ 0.87
CTSD-205ENST00000438213 CXCL9Q07325 125 aa20.46■□□□□ 0.87
CTSD-205ENST00000438213 DOK7Q18PE1 504 aa20.46■□□□□ 0.87
CTSD-205ENST00000438213 CIAPIN1Q6FI81 312 aa20.46■□□□□ 0.87
CTSD-205ENST00000438213 ITPRIPQ8IWB1 547 aa20.46■□□□□ 0.87
CTSD-205ENST00000438213 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.46■□□□□ 0.87
CTSD-205ENST00000438213 L3MBTL3Q96JM7 780 aaPredicted RBP20.46■□□□□ 0.87
CTSD-205ENST00000438213 GPR101Q96P66 508 aaPredicted RBP20.46■□□□□ 0.87
CTSD-205ENST00000438213 ZNF804BA4D1E1 1349 aa20.46■□□□□ 0.87
CTSD-205ENST00000438213 PLIN1O60240 522 aa20.45■□□□□ 0.86
CTSD-205ENST00000438213 HELBQ8NG08 1087 aaPredicted RBP20.45■□□□□ 0.86
CTSD-205ENST00000438213 DBNDD1Q9H9R9 158 aa20.45■□□□□ 0.86
CTSD-205ENST00000438213 DUOX1Q9NRD9 1551 aa20.44■□□□□ 0.86
CTSD-205ENST00000438213 ECE2O60344 883 aa20.44■□□□□ 0.86
CTSD-205ENST00000438213 TAF5LO75529 589 aa20.44■□□□□ 0.86
CTSD-205ENST00000438213 TOMM70O94826 608 aa20.44■□□□□ 0.86
CTSD-205ENST00000438213 RIPOR2Q9Y4F9 1068 aa20.44■□□□□ 0.86
CTSD-205ENST00000438213 MROH5Q6ZUA9 1318 aa20.44■□□□□ 0.86
CTSD-205ENST00000438213 COL4A5P29400 1685 aa20.43■□□□□ 0.86
CTSD-205ENST00000438213 POTECB2RU33 542 aa20.43■□□□□ 0.86
CTSD-205ENST00000438213 RAD17O75943 681 aa20.43■□□□□ 0.86
CTSD-205ENST00000438213 RLBP1P12271 317 aa20.43■□□□□ 0.86
CTSD-205ENST00000438213 PODNQ7Z5L7 613 aa20.43■□□□□ 0.86
CTSD-205ENST00000438213 PUS3Q9BZE2 481 aaKnown RBP20.43■□□□□ 0.86
CTSD-205ENST00000438213 HACL1Q9UJ83 578 aa20.43■□□□□ 0.86
CTSD-205ENST00000438213 MED23Q9ULK4 1368 aa20.43■□□□□ 0.86
CTSD-205ENST00000438213 WTIPA6NIX2 430 aaPredicted RBP20.42■□□□□ 0.86
CTSD-205ENST00000438213 YDJCA8MPS7 323 aa20.42■□□□□ 0.86
CTSD-205ENST00000438213 LMOD1P29536 600 aaPredicted RBP20.42■□□□□ 0.86
CTSD-205ENST00000438213 PANK1Q8TE04 598 aa20.42■□□□□ 0.86
CTSD-205ENST00000438213 FBXO3Q9UK99 471 aa20.42■□□□□ 0.86
CTSD-205ENST00000438213 ZBTB7BO15156 539 aaPredicted RBP20.41■□□□□ 0.86
CTSD-205ENST00000438213 RFX5P48382 616 aaPredicted RBP20.41■□□□□ 0.86
CTSD-205ENST00000438213 C1QTNF8P60827 252 aa20.41■□□□□ 0.86
CTSD-205ENST00000438213 PTPN12Q05209 780 aaKnown RBP20.41■□□□□ 0.86
CTSD-205ENST00000438213 UBE4AQ14139 1066 aa20.41■□□□□ 0.86
CTSD-205ENST00000438213 LRRC24Q50LG9 513 aa20.41■□□□□ 0.86
CTSD-205ENST00000438213 COA1Q9GZY4 146 aa20.41■□□□□ 0.86
CTSD-205ENST00000438213 EYA2O00167 538 aa20.4■□□□□ 0.86
CTSD-205ENST00000438213 MTX1Q13505 466 aa20.4■□□□□ 0.86
CTSD-205ENST00000438213 LTBP1Q14766 1721 aa20.4■□□□□ 0.86
CTSD-205ENST00000438213 METTL24Q5JXM2 366 aa20.4■□□□□ 0.86
CTSD-205ENST00000438213 C15orf52Q6ZUT6 534 aaKnown RBP20.4■□□□□ 0.86
CTSD-205ENST00000438213 KLHDC4Q8TBB5 520 aa20.4■□□□□ 0.86
CTSD-205ENST00000438213 RBM46Q8TBY0 533 aaKnown RBP20.4■□□□□ 0.86
CTSD-205ENST00000438213 WDR90Q96KV7 1748 aa20.4■□□□□ 0.86
CTSD-205ENST00000438213 SPEF2Q9C093 1822 aa20.4■□□□□ 0.86
CTSD-205ENST00000438213 CHMP4BQ9H444 224 aaKnown RBP20.4■□□□□ 0.86
CTSD-205ENST00000438213 PSMD14O00487 310 aa20.39■□□□□ 0.85
CTSD-205ENST00000438213 SRGAP3O43295 1099 aa20.39■□□□□ 0.85
CTSD-205ENST00000438213 TAF1DQ9H5J8 278 aaPredicted RBP20.39■□□□□ 0.85
CTSD-205ENST00000438213 EPHX2P34913 555 aa20.38■□□□□ 0.85
CTSD-205ENST00000438213 PDE3AQ14432 1141 aa20.38■□□□□ 0.85
CTSD-205ENST00000438213 PNMA8AQ86V59 439 aaPredicted RBP20.38■□□□□ 0.85
CTSD-205ENST00000438213 TXNRD3Q86VQ6 643 aa20.38■□□□□ 0.85
CTSD-205ENST00000438213 COPRSQ9NQ92 184 aa20.38■□□□□ 0.85
CTSD-205ENST00000438213 KCNQ5Q9NR82 932 aa20.38■□□□□ 0.85
CTSD-205ENST00000438213 SNAP23O00161 211 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms