RNA–Protein interactions for RNA: ENST00000437201.5

SBDSP1-203, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 1 (best)

Gene SBDSP1, Length 839 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-203ENST00000437201 DPF2Q92785 391 aa22.36■■□□□ 1.17
SBDSP1-203ENST00000437201 DBNDD1Q9H9R9 158 aa22.36■■□□□ 1.17
SBDSP1-203ENST00000437201 MKRN1Q9UHC7 482 aaKnown RBP22.36■■□□□ 1.17
SBDSP1-203ENST00000437201 RTL9Q8NET4 1388 aa22.36■■□□□ 1.17
SBDSP1-203ENST00000437201 XDHP47989 1333 aa22.35■■□□□ 1.17
SBDSP1-203ENST00000437201 LTBP1Q14766 1721 aa22.35■■□□□ 1.17
SBDSP1-203ENST00000437201 ZC3H15Q8WU90 426 aaKnown RBP22.35■■□□□ 1.17
SBDSP1-203ENST00000437201 PLA2G12BQ9BX93 195 aa22.35■■□□□ 1.17
SBDSP1-203ENST00000437201 SPINK5Q9NQ38 1064 aaPredicted RBP22.35■■□□□ 1.17
SBDSP1-203ENST00000437201 BSDC1Q9NW68 430 aaPredicted RBP22.35■■□□□ 1.17
SBDSP1-203ENST00000437201 CNOT7Q9UIV1 285 aaKnown RBP22.35■■□□□ 1.17
SBDSP1-203ENST00000437201 CACNA1FO60840 1977 aa22.34■■□□□ 1.17
SBDSP1-203ENST00000437201 RPS12P25398 132 aaKnown RBP22.34■■□□□ 1.17
SBDSP1-203ENST00000437201 CNTNAP1P78357 1384 aa22.34■■□□□ 1.17
SBDSP1-203ENST00000437201 PSMD14O00487 310 aa22.33■■□□□ 1.17
SBDSP1-203ENST00000437201 ATP2B4P23634 1241 aa22.33■■□□□ 1.17
SBDSP1-203ENST00000437201 DOK7Q18PE1 504 aa22.33■■□□□ 1.17
SBDSP1-203ENST00000437201 GREM2Q9H772 168 aa22.33■■□□□ 1.17
SBDSP1-203ENST00000437201 IGHMBP2P38935 993 aaKnown RBP22.32■■□□□ 1.16
SBDSP1-203ENST00000437201 COL4A1P02462 1669 aa22.31■■□□□ 1.16
SBDSP1-203ENST00000437201 IFFO2Q5TF58 517 aa22.31■■□□□ 1.16
SBDSP1-203ENST00000437201 MICALL2Q8IY33 904 aa22.31■■□□□ 1.16
SBDSP1-203ENST00000437201 PGAP2Q9UHJ9 254 aa22.31■■□□□ 1.16
SBDSP1-203ENST00000437201 ABT1Q9ULW3 272 aaKnown RBP22.31■■□□□ 1.16
SBDSP1-203ENST00000437201 DEFB115Q30KQ5 88 aa22.3■■□□□ 1.16
SBDSP1-203ENST00000437201 MINPP1Q9UNW1 487 aa22.3■■□□□ 1.16
SBDSP1-203ENST00000437201 ZBTB12Q9Y330 459 aaPredicted RBP22.3■■□□□ 1.16
SBDSP1-203ENST00000437201 ZNF521Q96K83 1311 aa22.3■■□□□ 1.16
SBDSP1-203ENST00000437201 RASSF10A6NK89 507 aa22.29■■□□□ 1.16
SBDSP1-203ENST00000437201 HSPA1AP0DMV8 641 aaKnown RBP22.29■■□□□ 1.16
SBDSP1-203ENST00000437201 HSPA1BP0DMV9 641 aaKnown RBP22.29■■□□□ 1.16
SBDSP1-203ENST00000437201 CASP7P55210 303 aa22.29■■□□□ 1.16
SBDSP1-203ENST00000437201 GPR101Q96P66 508 aaPredicted RBP22.29■■□□□ 1.16
SBDSP1-203ENST00000437201 MPHOSPH8Q99549 860 aa22.29■■□□□ 1.16
SBDSP1-203ENST00000437201 CSF1RP07333 972 aa22.28■■□□□ 1.16
SBDSP1-203ENST00000437201 VIL1P09327 827 aaKnown RBP22.28■■□□□ 1.16
SBDSP1-203ENST00000437201 ITGA6P23229 1130 aa22.28■■□□□ 1.16
SBDSP1-203ENST00000437201 BEND3Q5T5X7 828 aa22.28■■□□□ 1.16
SBDSP1-203ENST00000437201 CDC37L1Q7L3B6 337 aa22.28■■□□□ 1.16
SBDSP1-203ENST00000437201 PODNQ7Z5L7 613 aa22.28■■□□□ 1.16
SBDSP1-203ENST00000437201 E9PSI1 815 aa22.27■■□□□ 1.16
SBDSP1-203ENST00000437201 F6X3S4 739 aa22.27■■□□□ 1.16
SBDSP1-203ENST00000437201 VEGFBP49765 207 aa22.27■■□□□ 1.16
SBDSP1-203ENST00000437201 ANKRD2Q9GZV1 360 aa22.27■■□□□ 1.16
SBDSP1-203ENST00000437201 KCNQ5Q9NR82 932 aa22.27■■□□□ 1.16
SBDSP1-203ENST00000437201 LEMD3Q9Y2U8 911 aa22.27■■□□□ 1.16
SBDSP1-203ENST00000437201 MYH3P11055 1940 aa22.27■■□□□ 1.16
SBDSP1-203ENST00000437201 CCT4P50991 539 aaKnown RBP22.26■■□□□ 1.15
SBDSP1-203ENST00000437201 HIRAP54198 1017 aaPredicted RBP22.26■■□□□ 1.15
SBDSP1-203ENST00000437201 AGBL3Q8NEM8 1001 aa22.26■■□□□ 1.15
SBDSP1-203ENST00000437201 TRPM4Q8TD43 1214 aa22.26■■□□□ 1.15
SBDSP1-203ENST00000437201 ANKRD18BA2A2Z9 1011 aa22.25■■□□□ 1.15
SBDSP1-203ENST00000437201 TRAF5O00463 557 aa22.25■■□□□ 1.15
SBDSP1-203ENST00000437201 ALDH1L1O75891 902 aa22.25■■□□□ 1.15
SBDSP1-203ENST00000437201 FAM161AQ3B820 660 aa22.25■■□□□ 1.15
SBDSP1-203ENST00000437201 PCNTO95613 3336 aa22.25■■□□□ 1.15
SBDSP1-203ENST00000437201 MED23Q9ULK4 1368 aa22.25■■□□□ 1.15
SBDSP1-203ENST00000437201 ECE1P42892 770 aa22.24■■□□□ 1.15
SBDSP1-203ENST00000437201 IFIT5Q13325 482 aaKnown RBP22.24■■□□□ 1.15
SBDSP1-203ENST00000437201 SAMD7Q7Z3H4 446 aa22.24■■□□□ 1.15
SBDSP1-203ENST00000437201 C9orf78Q9NZ63 289 aaPredicted RBP22.24■■□□□ 1.15
SBDSP1-203ENST00000437201 SHTN1A0MZ66 631 aa22.23■■□□□ 1.15
SBDSP1-203ENST00000437201 USP17L3A6NCW0 530 aa22.23■■□□□ 1.15
SBDSP1-203ENST00000437201 USP17L4A6NCW7 530 aa22.23■■□□□ 1.15
SBDSP1-203ENST00000437201 GRM8O00222 908 aa22.23■■□□□ 1.15
SBDSP1-203ENST00000437201 TBC1D10BQ4KMP7 808 aaPredicted RBP22.23■■□□□ 1.15
SBDSP1-203ENST00000437201 CST9Q5W186 159 aa22.23■■□□□ 1.15
SBDSP1-203ENST00000437201 RSBN1LQ6PCB5 846 aaPredicted RBP22.23■■□□□ 1.15
SBDSP1-203ENST00000437201 USP17L1Q7RTZ2 530 aa22.23■■□□□ 1.15
SBDSP1-203ENST00000437201 AIDAQ96BJ3 306 aa22.23■■□□□ 1.15
SBDSP1-203ENST00000437201 GLIS2Q9BZE0 524 aaPredicted RBP22.23■■□□□ 1.15
SBDSP1-203ENST00000437201 SRCIN1Q9C0H9 1055 aa22.23■■□□□ 1.15
SBDSP1-203ENST00000437201 CELF2O95319 508 aaKnown RBP22.22■■□□□ 1.15
SBDSP1-203ENST00000437201 SLC4A10Q6U841 1118 aa22.22■■□□□ 1.15
SBDSP1-203ENST00000437201 DCPSQ96C86 337 aaKnown RBP22.22■■□□□ 1.15
SBDSP1-203ENST00000437201 COA1Q9GZY4 146 aa22.22■■□□□ 1.15
SBDSP1-203ENST00000437201 CHMP3Q9Y3E7 222 aa22.22■■□□□ 1.15
SBDSP1-203ENST00000437201 TLL2Q9Y6L7 1015 aa22.22■■□□□ 1.15
SBDSP1-203ENST00000437201 ZNF609O15014 1411 aa22.22■■□□□ 1.15
SBDSP1-203ENST00000437201 CCER2I3L3R5 266 aa22.21■■□□□ 1.15
SBDSP1-203ENST00000437201 KCNJ4P48050 445 aa22.21■■□□□ 1.15
SBDSP1-203ENST00000437201 FMR1Q06787 632 aaKnown RBP eCLIP22.21■■□□□ 1.15
SBDSP1-203ENST00000437201 KIF4BQ2VIQ3 1234 aa22.21■■□□□ 1.15
SBDSP1-203ENST00000437201 RBM26Q5T8P6 1007 aaKnown RBP22.21■■□□□ 1.15
SBDSP1-203ENST00000437201 ZNF804BA4D1E1 1349 aa22.21■■□□□ 1.15
SBDSP1-203ENST00000437201 WDR33Q9C0J8 1336 aaKnown RBP22.21■■□□□ 1.15
SBDSP1-203ENST00000437201 FOXO4P98177 505 aa22.2■■□□□ 1.14
SBDSP1-203ENST00000437201 MAP2K1Q02750 393 aaPredicted RBP22.2■■□□□ 1.14
SBDSP1-203ENST00000437201 CCDC57Q2TAC2 916 aa22.2■■□□□ 1.14
SBDSP1-203ENST00000437201 PAXIP1Q6ZW49 1069 aaPredicted RBP22.2■■□□□ 1.14
SBDSP1-203ENST00000437201 USP17L8P0C7I0 530 aa22.19■■□□□ 1.14
SBDSP1-203ENST00000437201 ZNF280AP59817 542 aaPredicted RBP22.19■■□□□ 1.14
SBDSP1-203ENST00000437201 SLFN5Q08AF3 891 aa22.19■■□□□ 1.14
SBDSP1-203ENST00000437201 COL13A1Q5TAT6 717 aaPredicted RBP22.19■■□□□ 1.14
SBDSP1-203ENST00000437201 KRT26Q7Z3Y9 468 aa22.19■■□□□ 1.14
SBDSP1-203ENST00000437201 USP48Q86UV5 1035 aa22.19■■□□□ 1.14
SBDSP1-203ENST00000437201 HHIPL1Q96JK4 782 aa22.19■■□□□ 1.14
SBDSP1-203ENST00000437201 PTPRCP08575 1304 aa22.19■■□□□ 1.14
SBDSP1-203ENST00000437201 TRPM7Q96QT4 1865 aa22.18■■□□□ 1.14
SBDSP1-203ENST00000437201 MYO3BQ8WXR4 1341 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms