RNA–Protein interactions for RNA: ENST00000435252.1

GTF3C3-204, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-204ENST00000435252 MDFIQ99750 246 aa8.33□□□□□ -1.08
GTF3C3-204ENST00000435252 DNAJC25Q9H1X3 360 aa8.33□□□□□ -1.08
GTF3C3-204ENST00000435252 FRRS1LQ9P0K9 344 aa8.33□□□□□ -1.08
GTF3C3-204ENST00000435252 AMOTL2Q9Y2J4 779 aa8.33□□□□□ -1.08
GTF3C3-204ENST00000435252 SHISA8B8ZZ34 492 aa8.32□□□□□ -1.08
GTF3C3-204ENST00000435252 CPNE3O75131 537 aaKnown RBP8.32□□□□□ -1.08
GTF3C3-204ENST00000435252 CPB1P15086 417 aa8.32□□□□□ -1.08
GTF3C3-204ENST00000435252 BTBD6Q96KE9 485 aa8.32□□□□□ -1.08
GTF3C3-204ENST00000435252 FAM177BA6PVY3 158 aa8.31□□□□□ -1.08
GTF3C3-204ENST00000435252 RNF225M0QZC1 329 aaPredicted RBP8.31□□□□□ -1.08
GTF3C3-204ENST00000435252 GPR182O15218 404 aa8.31□□□□□ -1.08
GTF3C3-204ENST00000435252 RGS9O75916 674 aaPredicted RBP8.31□□□□□ -1.08
GTF3C3-204ENST00000435252 KIF4AO95239 1232 aa8.31□□□□□ -1.08
GTF3C3-204ENST00000435252 FGD1P98174 961 aa8.31□□□□□ -1.08
GTF3C3-204ENST00000435252 MLLT1Q03111 559 aaPredicted RBP8.31□□□□□ -1.08
GTF3C3-204ENST00000435252 C1orf229Q6ZS94 237 aaPredicted RBP8.31□□□□□ -1.08
GTF3C3-204ENST00000435252 C1orf127Q8N9H9 656 aa8.31□□□□□ -1.08
GTF3C3-204ENST00000435252 MKL2Q9ULH7 1088 aa8.31□□□□□ -1.08
GTF3C3-204ENST00000435252 TREHO43280 583 aa8.3□□□□□ -1.08
GTF3C3-204ENST00000435252 LILRB5O75023 590 aa8.3□□□□□ -1.08
GTF3C3-204ENST00000435252 SMNDC1O75940 238 aaKnown RBP eCLIP8.3□□□□□ -1.08
GTF3C3-204ENST00000435252 ARHGEF15O94989 841 aa8.3□□□□□ -1.08
GTF3C3-204ENST00000435252 PLCB3Q01970 1234 aa8.3□□□□□ -1.08
GTF3C3-204ENST00000435252 PSAPL1Q6NUJ1 521 aa8.3□□□□□ -1.08
GTF3C3-204ENST00000435252 SCARF2Q96GP6 870 aaPredicted RBP8.3□□□□□ -1.08
GTF3C3-204ENST00000435252 NIF3L1Q9GZT8 377 aa8.3□□□□□ -1.08
GTF3C3-204ENST00000435252 JPH1Q9HDC5 661 aaPredicted RBP8.3□□□□□ -1.08
GTF3C3-204ENST00000435252 KANSL3Q9P2N6 904 aa8.3□□□□□ -1.08
GTF3C3-204ENST00000435252 FOXD3Q9UJU5 478 aaPredicted RBP8.3□□□□□ -1.08
GTF3C3-204ENST00000435252 M0R082 166 aa8.29□□□□□ -1.08
GTF3C3-204ENST00000435252 ATP2B2Q01814 1243 aa8.29□□□□□ -1.08
GTF3C3-204ENST00000435252 CACTIN-AS1Q8N1I8 211 aa8.29□□□□□ -1.08
GTF3C3-204ENST00000435252 ZNF417Q8TAU3 575 aa8.29□□□□□ -1.08
GTF3C3-204ENST00000435252 ZNF587Q96SQ5 575 aaPredicted RBP8.29□□□□□ -1.08
GTF3C3-204ENST00000435252 ZFYVE28Q9HCC9 887 aa8.29□□□□□ -1.08
GTF3C3-204ENST00000435252 CNTN3Q9P232 1028 aa8.29□□□□□ -1.08
GTF3C3-204ENST00000435252 SPDYE3A6NKU9 549 aa8.28□□□□□ -1.08
GTF3C3-204ENST00000435252 HFE2Q6ZVN8 426 aa8.28□□□□□ -1.08
GTF3C3-204ENST00000435252 BEND7Q8N7W2 519 aaPredicted RBP8.28□□□□□ -1.08
GTF3C3-204ENST00000435252 TTC9Q92623 222 aa8.28□□□□□ -1.08
GTF3C3-204ENST00000435252 PLD4Q96BZ4 506 aa8.28□□□□□ -1.08
GTF3C3-204ENST00000435252 CSRNP1Q96S65 589 aa8.28□□□□□ -1.08
GTF3C3-204ENST00000435252 CHRDQ9H2X0 955 aa8.28□□□□□ -1.08
GTF3C3-204ENST00000435252 NOP53Q9NZM5 478 aaKnown RBP8.28□□□□□ -1.08
GTF3C3-204ENST00000435252 ADAMTS8Q9UP79 889 aa8.28□□□□□ -1.08
GTF3C3-204ENST00000435252 ZBTB42B2RXF5 422 aa8.27□□□□□ -1.09
GTF3C3-204ENST00000435252 GNB5O14775 395 aa8.27□□□□□ -1.09
GTF3C3-204ENST00000435252 EREGO14944 169 aa8.27□□□□□ -1.09
GTF3C3-204ENST00000435252 ALBP02768 609 aa8.27□□□□□ -1.09
GTF3C3-204ENST00000435252 CYP2E1P05181 493 aaPredicted RBP8.27□□□□□ -1.09
GTF3C3-204ENST00000435252 DGKGP49619 791 aa8.27□□□□□ -1.09
GTF3C3-204ENST00000435252 TRIM26Q12899 539 aaPredicted RBP8.27□□□□□ -1.09
GTF3C3-204ENST00000435252 COL19A1Q14993 1142 aa8.27□□□□□ -1.09
GTF3C3-204ENST00000435252 PERM1Q5SV97 790 aa8.27□□□□□ -1.09
GTF3C3-204ENST00000435252 SMG9Q9H0W8 520 aaKnown RBP8.27□□□□□ -1.09
GTF3C3-204ENST00000435252 PRDM6Q9NQX0 595 aa8.27□□□□□ -1.09
GTF3C3-204ENST00000435252 SALL4Q9UJQ4 1053 aa8.27□□□□□ -1.09
GTF3C3-204ENST00000435252 NAGPAQ9UK23 515 aa8.27□□□□□ -1.09
GTF3C3-204ENST00000435252 J3QW42 95 aa8.26□□□□□ -1.09
GTF3C3-204ENST00000435252 EIF1AYO14602 144 aaKnown RBP8.26□□□□□ -1.09
GTF3C3-204ENST00000435252 MAPK8P45983 427 aa8.26□□□□□ -1.09
GTF3C3-204ENST00000435252 ORC1Q13415 861 aa8.26□□□□□ -1.09
GTF3C3-204ENST00000435252 NUDT8Q8WV74 236 aa8.26□□□□□ -1.09
GTF3C3-204ENST00000435252 LPIN3Q9BQK8 851 aa8.26□□□□□ -1.09
GTF3C3-204ENST00000435252 BCL11AQ9H165 835 aa8.26□□□□□ -1.09
GTF3C3-204ENST00000435252 ANKRD33BA6NCL7 494 aa8.25□□□□□ -1.09
GTF3C3-204ENST00000435252 IGHA2P01877 340 aa8.25□□□□□ -1.09
GTF3C3-204ENST00000435252 FMR1Q06787 632 aaKnown RBP eCLIP8.25□□□□□ -1.09
GTF3C3-204ENST00000435252 DSC3Q14574 896 aa8.25□□□□□ -1.09
GTF3C3-204ENST00000435252 ALG1LQ6GMV1 187 aa8.25□□□□□ -1.09
GTF3C3-204ENST00000435252 GALNT12Q8IXK2 581 aa8.25□□□□□ -1.09
GTF3C3-204ENST00000435252 FBF1Q8TES7 1133 aa8.25□□□□□ -1.09
GTF3C3-204ENST00000435252 STARD13Q9Y3M8 1113 aa8.25□□□□□ -1.09
GTF3C3-204ENST00000435252 PNMA6FA0A0J9YX94 578 aa8.24□□□□□ -1.09
GTF3C3-204ENST00000435252 COL13A1Q5TAT6 717 aaPredicted RBP8.24□□□□□ -1.09
GTF3C3-204ENST00000435252 C20orf204Q6ZNR8 217 aa8.24□□□□□ -1.09
GTF3C3-204ENST00000435252 CEP120Q8N960 986 aa8.24□□□□□ -1.09
GTF3C3-204ENST00000435252 PBX4Q9BYU1 374 aa8.24□□□□□ -1.09
GTF3C3-204ENST00000435252 MUC3BQ9H195 1237 aa8.24□□□□□ -1.09
GTF3C3-204ENST00000435252 NLRP2Q9NX02 1062 aa8.24□□□□□ -1.09
GTF3C3-204ENST00000435252 PTPRAP18433 802 aa8.23□□□□□ -1.09
GTF3C3-204ENST00000435252 ITGAEP38570 1179 aa8.23□□□□□ -1.09
GTF3C3-204ENST00000435252 KCNMA1Q12791 1236 aa8.23□□□□□ -1.09
GTF3C3-204ENST00000435252 ENOX2Q16206 610 aaKnown RBP8.23□□□□□ -1.09
GTF3C3-204ENST00000435252 CEP135Q66GS9 1140 aa8.23□□□□□ -1.09
GTF3C3-204ENST00000435252 DCAF11Q8TEB1 546 aa8.23□□□□□ -1.09
GTF3C3-204ENST00000435252 OSMRQ99650 979 aa8.23□□□□□ -1.09
GTF3C3-204ENST00000435252 MFAP1P55081 439 aaKnown RBP8.22□□□□□ -1.09
GTF3C3-204ENST00000435252 EAPPQ56P03 285 aaPredicted RBP8.22□□□□□ -1.09
GTF3C3-204ENST00000435252 DNAJC14Q6Y2X3 702 aaPredicted RBP8.22□□□□□ -1.09
GTF3C3-204ENST00000435252 ALYREFQ86V81 257 aaKnown RBP8.22□□□□□ -1.09
GTF3C3-204ENST00000435252 WFDC8Q8IUA0 241 aa8.22□□□□□ -1.09
GTF3C3-204ENST00000435252 CCDC74AQ96AQ1 378 aa8.22□□□□□ -1.09
GTF3C3-204ENST00000435252 RASSF4Q9H2L5 321 aa8.22□□□□□ -1.09
GTF3C3-204ENST00000435252 NPHS2Q9NP85 383 aa8.22□□□□□ -1.09
GTF3C3-204ENST00000435252 TRAK1Q9UPV9 953 aa8.22□□□□□ -1.09
GTF3C3-204ENST00000435252 PDE2AO00408 941 aaPredicted RBP8.21□□□□□ -1.1
GTF3C3-204ENST00000435252 GADD45BO75293 160 aaPredicted RBP8.21□□□□□ -1.1
GTF3C3-204ENST00000435252 AFF1P51825 1210 aaKnown RBP8.21□□□□□ -1.1
GTF3C3-204ENST00000435252 CABP4P57796 275 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms