RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 CCDC171Q6TFL3 1326 aa14.35□□□□□ -0.11
CTCFL-209ENST00000433949 HCLS1P14317 486 aaPredicted RBP14.34□□□□□ -0.11
CTCFL-209ENST00000433949 ZKSCAN1P17029 563 aaPredicted RBP14.34□□□□□ -0.11
CTCFL-209ENST00000433949 TFCP2Q12800 502 aa14.34□□□□□ -0.11
CTCFL-209ENST00000433949 CLEC4GQ6UXB4 293 aa14.34□□□□□ -0.11
CTCFL-209ENST00000433949 ZBTB38Q8NAP3 1195 aaPredicted RBP14.34□□□□□ -0.11
CTCFL-209ENST00000433949 SETDB2Q96T68 719 aa14.34□□□□□ -0.11
CTCFL-209ENST00000433949 BOLA2Q9H3K6 86 aa14.34□□□□□ -0.11
CTCFL-209ENST00000433949 TLR7Q9NYK1 1049 aaKnown RBP14.34□□□□□ -0.11
CTCFL-209ENST00000433949 RREB1Q92766 1687 aa14.34□□□□□ -0.11
CTCFL-209ENST00000433949 MYH3P11055 1940 aa14.34□□□□□ -0.11
CTCFL-209ENST00000433949 NPHP1O15259 732 aa14.34□□□□□ -0.11
CTCFL-209ENST00000433949 GTF2E1P29083 439 aaPredicted RBP14.34□□□□□ -0.11
CTCFL-209ENST00000433949 IL15P40933 162 aaPredicted RBP14.34□□□□□ -0.11
CTCFL-209ENST00000433949 MSL1Q68DK7 614 aa14.34□□□□□ -0.11
CTCFL-209ENST00000433949 PDGFDQ9GZP0 370 aaPredicted RBP14.34□□□□□ -0.11
CTCFL-209ENST00000433949 STK32BQ9NY57 414 aa14.34□□□□□ -0.11
CTCFL-209ENST00000433949 DBNLQ9UJU6 430 aaKnown RBP14.34□□□□□ -0.11
CTCFL-209ENST00000433949 FBXO3Q9UK99 471 aa14.34□□□□□ -0.11
CTCFL-209ENST00000433949 SPEF2Q9C093 1822 aa14.34□□□□□ -0.11
CTCFL-209ENST00000433949 GOLGA6L3A6NEY3 463 aa14.33□□□□□ -0.12
CTCFL-209ENST00000433949 GYS1P13807 737 aa14.33□□□□□ -0.12
CTCFL-209ENST00000433949 ADRA2BP18089 450 aa14.33□□□□□ -0.12
CTCFL-209ENST00000433949 SLC15A2Q16348 729 aa14.33□□□□□ -0.12
CTCFL-209ENST00000433949 TTC14Q96N46 770 aa14.33□□□□□ -0.12
CTCFL-209ENST00000433949 UTP14AQ9BVJ6 771 aaKnown RBP14.33□□□□□ -0.12
CTCFL-209ENST00000433949 CIAO1O76071 339 aa14.33□□□□□ -0.12
CTCFL-209ENST00000433949 NECTIN1Q15223 517 aa14.33□□□□□ -0.12
CTCFL-209ENST00000433949 RNF20Q5VTR2 975 aa14.33□□□□□ -0.12
CTCFL-209ENST00000433949 UPF1Q92900 1129 aaKnown RBP eCLIP14.33□□□□□ -0.12
CTCFL-209ENST00000433949 MAP4K1Q92918 833 aa14.33□□□□□ -0.12
CTCFL-209ENST00000433949 NUP98P52948 1817 aa14.32□□□□□ -0.12
CTCFL-209ENST00000433949 FSD2A1L4K1 749 aa14.32□□□□□ -0.12
CTCFL-209ENST00000433949 IRS4O14654 1257 aaPredicted RBP14.32□□□□□ -0.12
CTCFL-209ENST00000433949 PCCAP05165 728 aaPredicted RBP14.32□□□□□ -0.12
CTCFL-209ENST00000433949 NMIQ13287 307 aaPredicted RBP14.32□□□□□ -0.12
CTCFL-209ENST00000433949 NFIXQ14938 502 aa14.32□□□□□ -0.12
CTCFL-209ENST00000433949 KLHL40Q2TBA0 621 aa14.32□□□□□ -0.12
CTCFL-209ENST00000433949 PNPLA7Q6ZV29 1317 aa14.32□□□□□ -0.12
CTCFL-209ENST00000433949 ILDR2Q71H61 639 aa14.32□□□□□ -0.12
CTCFL-209ENST00000433949 MED23Q9ULK4 1368 aa14.32□□□□□ -0.12
CTCFL-209ENST00000433949 GOLGB1Q14789 3259 aaKnown RBP14.32□□□□□ -0.12
CTCFL-209ENST00000433949 VPS53Q5VIR6 699 aa14.31□□□□□ -0.12
CTCFL-209ENST00000433949 NBPF5PQ86XG9 351 aaPredicted RBP14.31□□□□□ -0.12
CTCFL-209ENST00000433949 CCDC125Q86Z20 511 aa14.31□□□□□ -0.12
CTCFL-209ENST00000433949 RASEFQ8IZ41 740 aa14.31□□□□□ -0.12
CTCFL-209ENST00000433949 LIMCH1Q9UPQ0 1083 aa14.31□□□□□ -0.12
CTCFL-209ENST00000433949 PSMA5P28066 241 aa14.31□□□□□ -0.12
CTCFL-209ENST00000433949 KCNJ4P48050 445 aa14.31□□□□□ -0.12
CTCFL-209ENST00000433949 PTH1RQ03431 593 aa14.31□□□□□ -0.12
CTCFL-209ENST00000433949 ERFEQ4G0M1 354 aa14.31□□□□□ -0.12
CTCFL-209ENST00000433949 PARP10Q53GL7 1025 aa14.31□□□□□ -0.12
CTCFL-209ENST00000433949 HAUS7Q99871 368 aa14.31□□□□□ -0.12
CTCFL-209ENST00000433949 PLA2G12BQ9BX93 195 aa14.31□□□□□ -0.12
CTCFL-209ENST00000433949 GZF1Q9H116 711 aaPredicted RBP14.31□□□□□ -0.12
CTCFL-209ENST00000433949 HMG20BQ9P0W2 317 aa14.31□□□□□ -0.12
CTCFL-209ENST00000433949 SRCAPQ6ZRS2 3230 aa14.3□□□□□ -0.12
CTCFL-209ENST00000433949 SH3TC1Q8TE82 1336 aa14.3□□□□□ -0.12
CTCFL-209ENST00000433949 EYA2O00167 538 aa14.3□□□□□ -0.12
CTCFL-209ENST00000433949 NTSR2O95665 410 aa14.3□□□□□ -0.12
CTCFL-209ENST00000433949 CASTP20810 708 aaKnown RBP14.3□□□□□ -0.12
CTCFL-209ENST00000433949 ATG9AQ7Z3C6 839 aa14.3□□□□□ -0.12
CTCFL-209ENST00000433949 FAM227BQ96M60 508 aa14.3□□□□□ -0.12
CTCFL-209ENST00000433949 ZSWIM6Q9HCJ5 1215 aa14.3□□□□□ -0.12
CTCFL-209ENST00000433949 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.3□□□□□ -0.12
CTCFL-209ENST00000433949 CYP46A1Q9Y6A2 500 aa14.3□□□□□ -0.12
CTCFL-209ENST00000433949 BRD1O95696 1058 aa14.3□□□□□ -0.12
CTCFL-209ENST00000433949 HMGB2P26583 209 aaKnown RBP14.3□□□□□ -0.12
CTCFL-209ENST00000433949 PKP1Q13835 747 aa14.3□□□□□ -0.12
CTCFL-209ENST00000433949 PRPF40BQ6NWY9 871 aaKnown RBP14.3□□□□□ -0.12
CTCFL-209ENST00000433949 ZSCAN31Q96LW9 406 aaPredicted RBP14.3□□□□□ -0.12
CTCFL-209ENST00000433949 RBM8AQ9Y5S9 174 aaKnown RBP14.3□□□□□ -0.12
CTCFL-209ENST00000433949 UBR3Q6ZT12 1888 aa14.3□□□□□ -0.12
CTCFL-209ENST00000433949 AK2P54819 239 aa14.29□□□□□ -0.12
CTCFL-209ENST00000433949 CCDC57Q2TAC2 916 aa14.29□□□□□ -0.12
CTCFL-209ENST00000433949 MCTP1Q6DN14 999 aa14.29□□□□□ -0.12
CTCFL-209ENST00000433949 DBNDD2Q9BQY9 259 aa14.29□□□□□ -0.12
CTCFL-209ENST00000433949 SH2B1Q9NRF2 756 aaPredicted RBP14.29□□□□□ -0.12
CTCFL-209ENST00000433949 ZDHHC9Q9Y397 364 aa14.29□□□□□ -0.12
CTCFL-209ENST00000433949 DDX49Q9Y6V7 483 aaKnown RBP14.29□□□□□ -0.12
CTCFL-209ENST00000433949 A0A0D9SFI3 127 aa14.29□□□□□ -0.12
CTCFL-209ENST00000433949 MRE11P49959 708 aa14.29□□□□□ -0.12
CTCFL-209ENST00000433949 CREB3L3Q68CJ9 461 aa14.29□□□□□ -0.12
CTCFL-209ENST00000433949 RUFY3Q7L099 469 aa14.29□□□□□ -0.12
CTCFL-209ENST00000433949 ZNF594Q96JF6 807 aaPredicted RBP14.29□□□□□ -0.12
CTCFL-209ENST00000433949 CDHR2Q9BYE9 1310 aa14.28□□□□□ -0.12
CTCFL-209ENST00000433949 TSGA10IPQ3SY00 556 aa14.28□□□□□ -0.12
CTCFL-209ENST00000433949 NOL8Q76FK4 1167 aaKnown RBP14.28□□□□□ -0.12
CTCFL-209ENST00000433949 JAKMIP1Q96N16 626 aaKnown RBP14.28□□□□□ -0.12
CTCFL-209ENST00000433949 ZNF609O15014 1411 aa14.28□□□□□ -0.12
CTCFL-209ENST00000433949 WDR33Q9C0J8 1336 aaKnown RBP14.28□□□□□ -0.12
CTCFL-209ENST00000433949 PDIA4P13667 645 aaKnown RBP14.27□□□□□ -0.12
CTCFL-209ENST00000433949 TPTE2Q6XPS3 522 aa14.27□□□□□ -0.12
CTCFL-209ENST00000433949 KBTBD3Q8NAB2 608 aa14.27□□□□□ -0.12
CTCFL-209ENST00000433949 FLAD1Q8NFF5 587 aa14.27□□□□□ -0.12
CTCFL-209ENST00000433949 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.27□□□□□ -0.12
CTCFL-209ENST00000433949 PDRG1Q9NUG6 133 aa14.27□□□□□ -0.12
CTCFL-209ENST00000433949 AKAP2Q9Y2D5 859 aa14.27□□□□□ -0.12
CTCFL-209ENST00000433949 C4AP0C0L4 1744 aa14.27□□□□□ -0.12
CTCFL-209ENST00000433949 RPAP1Q9BWH6 1393 aaPredicted RBP14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms