RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 MLECQ14165 292 aa13.45□□□□□ -0.26
HMGCS1-202ENST00000433297 EAF2Q96CJ1 260 aaPredicted RBP13.45□□□□□ -0.26
HMGCS1-202ENST00000433297 ZSWIM4Q9H7M6 989 aa13.45□□□□□ -0.26
HMGCS1-202ENST00000433297 PRR36Q9H6K5 1346 aa13.44□□□□□ -0.26
HMGCS1-202ENST00000433297 CHGBP05060 677 aa13.44□□□□□ -0.26
HMGCS1-202ENST00000433297 SMC1AQ14683 1233 aaKnown RBP13.44□□□□□ -0.26
HMGCS1-202ENST00000433297 CCDC93Q567U6 631 aa13.44□□□□□ -0.26
HMGCS1-202ENST00000433297 CCDC129Q6ZRS4 1044 aa13.44□□□□□ -0.26
HMGCS1-202ENST00000433297 CREBRFQ8IUR6 639 aa13.44□□□□□ -0.26
HMGCS1-202ENST00000433297 USHBP1Q8N6Y0 703 aa13.44□□□□□ -0.26
HMGCS1-202ENST00000433297 RASSF4Q9H2L5 321 aa13.44□□□□□ -0.26
HMGCS1-202ENST00000433297 HECW2Q9P2P5 1572 aa13.44□□□□□ -0.26
HMGCS1-202ENST00000433297 ARHGEF10O15013 1369 aa13.44□□□□□ -0.26
HMGCS1-202ENST00000433297 SCRN1Q12765 414 aa13.44□□□□□ -0.26
HMGCS1-202ENST00000433297 CWF19L2Q2TBE0 894 aaKnown RBP13.44□□□□□ -0.26
HMGCS1-202ENST00000433297 BEND3Q5T5X7 828 aa13.44□□□□□ -0.26
HMGCS1-202ENST00000433297 CCDC150Q8NCX0 1101 aa13.44□□□□□ -0.26
HMGCS1-202ENST00000433297 KLHDC4Q8TBB5 520 aa13.44□□□□□ -0.26
HMGCS1-202ENST00000433297 LCMT1Q9UIC8 334 aa13.44□□□□□ -0.26
HMGCS1-202ENST00000433297 HIP1O00291 1037 aa13.44□□□□□ -0.26
HMGCS1-202ENST00000433297 SLC20A2Q08357 652 aa13.44□□□□□ -0.26
HMGCS1-202ENST00000433297 NCOA5Q9HCD5 579 aaKnown RBP13.44□□□□□ -0.26
HMGCS1-202ENST00000433297 FAM193AP78312 1265 aa13.43□□□□□ -0.26
HMGCS1-202ENST00000433297 HSP90AA4PQ58FG1 418 aa13.43□□□□□ -0.26
HMGCS1-202ENST00000433297 OSBPL5Q9H0X9 879 aaPredicted RBP13.43□□□□□ -0.26
HMGCS1-202ENST00000433297 PSDA5PKW4 1024 aaPredicted RBP13.43□□□□□ -0.26
HMGCS1-202ENST00000433297 SASH3O75995 380 aa13.43□□□□□ -0.26
HMGCS1-202ENST00000433297 ZRANB2O95218 330 aaKnown RBP eCLIP13.43□□□□□ -0.263e-15■□□□□ 9
HMGCS1-202ENST00000433297 TEFQ10587 303 aa13.43□□□□□ -0.26
HMGCS1-202ENST00000433297 IMPACTQ9P2X3 320 aa13.43□□□□□ -0.26
HMGCS1-202ENST00000433297 RCOR1Q9UKL0 485 aa13.43□□□□□ -0.26
HMGCS1-202ENST00000433297 ADCY9O60503 1353 aa13.43□□□□□ -0.26
HMGCS1-202ENST00000433297 SERPINC1P01008 464 aa13.43□□□□□ -0.26
HMGCS1-202ENST00000433297 POLR3DP05423 398 aaPredicted RBP13.43□□□□□ -0.26
HMGCS1-202ENST00000433297 ZNF396Q96N95 335 aaPredicted RBP13.43□□□□□ -0.26
HMGCS1-202ENST00000433297 APOBRQ0VD83 1088 aa13.42□□□□□ -0.26
HMGCS1-202ENST00000433297 OTUD7BQ6GQQ9 843 aa13.42□□□□□ -0.26
HMGCS1-202ENST00000433297 CHST3Q7LGC8 479 aa13.42□□□□□ -0.26
HMGCS1-202ENST00000433297 CLTCQ00610 1675 aaKnown RBP13.42□□□□□ -0.26
HMGCS1-202ENST00000433297 ATP1A3P13637 1013 aa13.42□□□□□ -0.26
HMGCS1-202ENST00000433297 ADD1P35611 737 aaKnown RBP13.42□□□□□ -0.26
HMGCS1-202ENST00000433297 NDUFA8P51970 172 aa13.42□□□□□ -0.26
HMGCS1-202ENST00000433297 CFAP100Q494V2 611 aa13.42□□□□□ -0.26
HMGCS1-202ENST00000433297 PTPDC1A2A3K4 754 aa13.41□□□□□ -0.26
HMGCS1-202ENST00000433297 MYO1CO00159 1063 aa13.41□□□□□ -0.26
HMGCS1-202ENST00000433297 AIMP1Q12904 312 aaKnown RBP13.41□□□□□ -0.26
HMGCS1-202ENST00000433297 ERC1Q8IUD2 1116 aa13.41□□□□□ -0.26
HMGCS1-202ENST00000433297 PDILTQ8N807 584 aa13.41□□□□□ -0.26
HMGCS1-202ENST00000433297 MRPS27Q92552 414 aaKnown RBP13.41□□□□□ -0.26
HMGCS1-202ENST00000433297 PCDHA7Q9UN72 937 aa13.41□□□□□ -0.26
HMGCS1-202ENST00000433297 KCNQ3O43525 872 aa13.41□□□□□ -0.26
HMGCS1-202ENST00000433297 GIGYF1O75420 1035 aaPredicted RBP13.41□□□□□ -0.26
HMGCS1-202ENST00000433297 GNG11P61952 73 aa13.41□□□□□ -0.26
HMGCS1-202ENST00000433297 IRX3P78415 501 aaPredicted RBP13.41□□□□□ -0.26
HMGCS1-202ENST00000433297 STK38Q15208 465 aa13.41□□□□□ -0.26
HMGCS1-202ENST00000433297 SKIDA1Q1XH10 827 aa13.41□□□□□ -0.26
HMGCS1-202ENST00000433297 ENGASEQ8NFI3 743 aa13.41□□□□□ -0.26
HMGCS1-202ENST00000433297 ARFGAP3Q9NP61 516 aa13.41□□□□□ -0.26
HMGCS1-202ENST00000433297 MAP3K2Q9Y2U5 619 aa13.41□□□□□ -0.26
HMGCS1-202ENST00000433297 METP08581 1390 aa13.4□□□□□ -0.26
HMGCS1-202ENST00000433297 SASH1O94885 1247 aa13.4□□□□□ -0.26
HMGCS1-202ENST00000433297 AK7Q96M32 723 aa13.4□□□□□ -0.26
HMGCS1-202ENST00000433297 KIAA1468Q9P260 1216 aa13.4□□□□□ -0.26
HMGCS1-202ENST00000433297 USP42Q9H9J4 1324 aaKnown RBP13.4□□□□□ -0.26
HMGCS1-202ENST00000433297 TUBGCP6Q96RT7 1819 aa13.4□□□□□ -0.26
HMGCS1-202ENST00000433297 MYO5BQ9ULV0 1848 aa13.4□□□□□ -0.26
HMGCS1-202ENST00000433297 TAF5LO75529 589 aa13.4□□□□□ -0.26
HMGCS1-202ENST00000433297 TBC1D8O95759 1140 aa13.4□□□□□ -0.26
HMGCS1-202ENST00000433297 SLC3A2P08195 630 aaKnown RBP13.4□□□□□ -0.26
HMGCS1-202ENST00000433297 FANCCQ00597 558 aa13.4□□□□□ -0.26
HMGCS1-202ENST00000433297 CWC15Q9P013 229 aaKnown RBP13.4□□□□□ -0.26
HMGCS1-202ENST00000433297 MLH3Q9UHC1 1453 aa13.4□□□□□ -0.26
HMGCS1-202ENST00000433297 TADA3O75528 432 aa13.4□□□□□ -0.26
HMGCS1-202ENST00000433297 UBASH3AP57075 661 aa13.4□□□□□ -0.26
HMGCS1-202ENST00000433297 MCM6Q14566 821 aa13.4□□□□□ -0.26
HMGCS1-202ENST00000433297 CC2D1AQ6P1N0 951 aaPredicted RBP13.4□□□□□ -0.26
HMGCS1-202ENST00000433297 NFATC2IPQ8NCF5 419 aa13.4□□□□□ -0.26
HMGCS1-202ENST00000433297 HMG20BQ9P0W2 317 aa13.4□□□□□ -0.26
HMGCS1-202ENST00000433297 EFCAB8A8MWE9 144 aa13.39□□□□□ -0.27
HMGCS1-202ENST00000433297 CASQ1P31415 396 aa13.39□□□□□ -0.27
HMGCS1-202ENST00000433297 KRT32Q14532 448 aa13.39□□□□□ -0.27
HMGCS1-202ENST00000433297 C14orf37Q86TY3 774 aa13.39□□□□□ -0.27
HMGCS1-202ENST00000433297 LRRFIP1Q32MZ4 808 aaKnown RBP13.39□□□□□ -0.27
HMGCS1-202ENST00000433297 ADAM21Q9UKJ8 722 aa13.39□□□□□ -0.27
HMGCS1-202ENST00000433297 NSUN7Q8NE18 718 aaKnown RBP13.38□□□□□ -0.27
HMGCS1-202ENST00000433297 NGDNQ8NEJ9 315 aaKnown RBP13.38□□□□□ -0.27
HMGCS1-202ENST00000433297 FANCGO15287 622 aa13.38□□□□□ -0.27
HMGCS1-202ENST00000433297 CYP21A2P08686 494 aa13.38□□□□□ -0.27
HMGCS1-202ENST00000433297 CCDC158Q5M9N0 1113 aa13.38□□□□□ -0.27
HMGCS1-202ENST00000433297 FMR1NBQ8N0W7 255 aaPredicted RBP13.38□□□□□ -0.27
HMGCS1-202ENST00000433297 DPF2Q92785 391 aa13.38□□□□□ -0.27
HMGCS1-202ENST00000433297 PARD6BQ9BYG5 372 aa13.38□□□□□ -0.27
HMGCS1-202ENST00000433297 LGR6Q9HBX8 967 aa13.38□□□□□ -0.27
HMGCS1-202ENST00000433297 CCP110O43303 1012 aa13.38□□□□□ -0.27
HMGCS1-202ENST00000433297 TRIM65Q6PJ69 517 aa13.38□□□□□ -0.27
HMGCS1-202ENST00000433297 PAXIP1Q6ZW49 1069 aaPredicted RBP13.38□□□□□ -0.27
HMGCS1-202ENST00000433297 RAB11FIP4Q86YS3 637 aa13.38□□□□□ -0.27
HMGCS1-202ENST00000433297 KCND1Q9NSA2 647 aa13.38□□□□□ -0.27
HMGCS1-202ENST00000433297 VPS18Q9P253 973 aa13.38□□□□□ -0.27
HMGCS1-202ENST00000433297 NPHP4O75161 1426 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms