RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 RBM41Q96IZ5 413 aaKnown RBP12.56□□□□□ -0.4
CCDC171-202ENST00000432954 ALS2CR12Q96Q35 445 aa12.56□□□□□ -0.4
CCDC171-202ENST00000432954 POLA1P09884 1462 aaPredicted RBP12.55□□□□□ -0.4
CCDC171-202ENST00000432954 GOLGA6L10A6NI86 522 aa12.55□□□□□ -0.4
CCDC171-202ENST00000432954 CREB3O43889 395 aa12.55□□□□□ -0.4
CCDC171-202ENST00000432954 MAP3K9P80192 1104 aa12.55□□□□□ -0.4
CCDC171-202ENST00000432954 MECOMQ03112 1051 aa12.55□□□□□ -0.4
CCDC171-202ENST00000432954 ADCY1Q08828 1119 aa12.55□□□□□ -0.4
CCDC171-202ENST00000432954 KCNB1Q14721 858 aa12.55□□□□□ -0.4
CCDC171-202ENST00000432954 LARP1BQ659C4 914 aaKnown RBP12.55□□□□□ -0.4
CCDC171-202ENST00000432954 MAGEC3Q8TD91 643 aa12.55□□□□□ -0.4
CCDC171-202ENST00000432954 ZFAND2BQ8WV99 257 aa12.55□□□□□ -0.4
CCDC171-202ENST00000432954 LMBR1Q8WVP7 490 aa12.55□□□□□ -0.4
CCDC171-202ENST00000432954 XAGE2Q96GT9 111 aa12.55□□□□□ -0.4
CCDC171-202ENST00000432954 ATP6V0A4Q9HBG4 840 aa12.55□□□□□ -0.4
CCDC171-202ENST00000432954 GPBP1L1Q9HC44 474 aaPredicted RBP12.55□□□□□ -0.4
CCDC171-202ENST00000432954 METTL14Q9HCE5 456 aaKnown RBP12.55□□□□□ -0.4
CCDC171-202ENST00000432954 HDAC6Q9UBN7 1215 aa12.55□□□□□ -0.4
CCDC171-202ENST00000432954 K7ELQ4 463 aaPredicted RBP12.54□□□□□ -0.4
CCDC171-202ENST00000432954 BDNFP23560 247 aa12.54□□□□□ -0.4
CCDC171-202ENST00000432954 TTLL7Q6ZT98 887 aa12.54□□□□□ -0.4
CCDC171-202ENST00000432954 TMX3Q96JJ7 454 aa12.54□□□□□ -0.4
CCDC171-202ENST00000432954 HOXC10Q9NYD6 342 aa12.54□□□□□ -0.4
CCDC171-202ENST00000432954 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.54□□□□□ -0.4
CCDC171-202ENST00000432954 ZNF510Q9Y2H8 683 aa12.54□□□□□ -0.4
CCDC171-202ENST00000432954 PCDHGC5Q9Y5F6 944 aa12.54□□□□□ -0.4
CCDC171-202ENST00000432954 KIF21AQ7Z4S6 1674 aa12.54□□□□□ -0.4
CCDC171-202ENST00000432954 TBC1D8O95759 1140 aa12.54□□□□□ -0.4
CCDC171-202ENST00000432954 FXNQ16595 210 aa12.54□□□□□ -0.4
CCDC171-202ENST00000432954 MTHFD1LQ6UB35 978 aa12.54□□□□□ -0.4
CCDC171-202ENST00000432954 PACS1Q6VY07 963 aa12.54□□□□□ -0.4
CCDC171-202ENST00000432954 UHMK1Q8TAS1 419 aaKnown RBP12.54□□□□□ -0.4
CCDC171-202ENST00000432954 PARD6BQ9BYG5 372 aa12.54□□□□□ -0.4
CCDC171-202ENST00000432954 L2HGDHQ9H9P8 463 aa12.54□□□□□ -0.4
CCDC171-202ENST00000432954 RTEL1Q9NZ71 1219 aa12.54□□□□□ -0.4
CCDC171-202ENST00000432954 LAMC3Q9Y6N6 1575 aa12.54□□□□□ -0.4
CCDC171-202ENST00000432954 ATXN2Q99700 1313 aaKnown RBP12.53□□□□□ -0.4
CCDC171-202ENST00000432954 ENO4A6NNW6 628 aa12.53□□□□□ -0.4
CCDC171-202ENST00000432954 SLC4A2P04920 1241 aa12.53□□□□□ -0.4
CCDC171-202ENST00000432954 VIL1P09327 827 aaKnown RBP12.53□□□□□ -0.4
CCDC171-202ENST00000432954 SMARCA1P28370 1054 aa12.53□□□□□ -0.4
CCDC171-202ENST00000432954 Q4G0T1 1027 aa12.53□□□□□ -0.4
CCDC171-202ENST00000432954 CCDC92Q53HC0 331 aaPredicted RBP12.53□□□□□ -0.4
CCDC171-202ENST00000432954 NUP133Q8WUM0 1156 aa12.53□□□□□ -0.4
CCDC171-202ENST00000432954 BRD8Q9H0E9 1235 aa12.53□□□□□ -0.4
CCDC171-202ENST00000432954 SENP2Q9HC62 589 aa12.53□□□□□ -0.4
CCDC171-202ENST00000432954 GPRASP1Q5JY77 1395 aa12.53□□□□□ -0.4
CCDC171-202ENST00000432954 EVC2Q86UK5 1308 aa12.53□□□□□ -0.4
CCDC171-202ENST00000432954 PRPF40AO75400 957 aaKnown RBP12.53□□□□□ -0.4
CCDC171-202ENST00000432954 LIG3P49916 1009 aa12.53□□□□□ -0.4
CCDC171-202ENST00000432954 QPCTLQ9NXS2 382 aa12.53□□□□□ -0.4
CCDC171-202ENST00000432954 NRBP1Q9UHY1 535 aa12.53□□□□□ -0.4
CCDC171-202ENST00000432954 RNF8O76064 485 aa12.52□□□□□ -0.4
CCDC171-202ENST00000432954 MAP4K4O95819 1239 aaPredicted RBP12.52□□□□□ -0.4
CCDC171-202ENST00000432954 NYAP1Q6ZVC0 841 aa12.52□□□□□ -0.4
CCDC171-202ENST00000432954 FAM76AQ8TAV0 307 aa12.52□□□□□ -0.4
CCDC171-202ENST00000432954 CUL5Q93034 780 aa12.52□□□□□ -0.4
CCDC171-202ENST00000432954 TMEM221A6NGB7 291 aa12.52□□□□□ -0.41
CCDC171-202ENST00000432954 EIF3FO00303 357 aaPredicted RBP12.52□□□□□ -0.41
CCDC171-202ENST00000432954 SKAP2O75563 359 aaPredicted RBP12.52□□□□□ -0.41
CCDC171-202ENST00000432954 MYCLP1P12525 358 aaPredicted RBP12.52□□□□□ -0.41
CCDC171-202ENST00000432954 CASTP20810 708 aaKnown RBP12.52□□□□□ -0.41
CCDC171-202ENST00000432954 HDAC4P56524 1084 aa12.52□□□□□ -0.41
CCDC171-202ENST00000432954 NAA25Q14CX7 972 aa12.52□□□□□ -0.41
CCDC171-202ENST00000432954 THEMIS2Q5TEJ8 643 aa12.52□□□□□ -0.41
CCDC171-202ENST00000432954 FAAH2Q6GMR7 532 aa12.52□□□□□ -0.41
CCDC171-202ENST00000432954 DPY19L2Q6NUT2 758 aa12.52□□□□□ -0.41
CCDC171-202ENST00000432954 BRAPQ7Z569 592 aa12.52□□□□□ -0.41
CCDC171-202ENST00000432954 CCDC170Q8IYT3 715 aa12.52□□□□□ -0.41
CCDC171-202ENST00000432954 MYO1HQ8N1T3 1032 aa12.52□□□□□ -0.41
CCDC171-202ENST00000432954 CCDC150Q8NCX0 1101 aa12.52□□□□□ -0.41
CCDC171-202ENST00000432954 CD248Q9HCU0 757 aa12.52□□□□□ -0.41
CCDC171-202ENST00000432954 IFT57Q9NWB7 429 aa12.52□□□□□ -0.41
CCDC171-202ENST00000432954 AK9Q5TCS8 1911 aa12.51□□□□□ -0.41
CCDC171-202ENST00000432954 ANKRD65E5RJM6 399 aa12.51□□□□□ -0.41
CCDC171-202ENST00000432954 ZEB2O60315 1214 aa12.51□□□□□ -0.41
CCDC171-202ENST00000432954 FERP16591 822 aa12.51□□□□□ -0.41
CCDC171-202ENST00000432954 TPD52L1Q16890 204 aaPredicted RBP12.51□□□□□ -0.41
CCDC171-202ENST00000432954 KIF4BQ2VIQ3 1234 aa12.51□□□□□ -0.41
CCDC171-202ENST00000432954 GORASP1Q9BQQ3 440 aa12.51□□□□□ -0.41
CCDC171-202ENST00000432954 CORO1BQ9BR76 489 aa12.51□□□□□ -0.41
CCDC171-202ENST00000432954 ACBD3Q9H3P7 528 aa12.51□□□□□ -0.41
CCDC171-202ENST00000432954 ERICH2A1L162 156 aa12.5□□□□□ -0.41
CCDC171-202ENST00000432954 CFAP69A5D8W1 941 aa12.5□□□□□ -0.41
CCDC171-202ENST00000432954 M0R2C6 588 aa12.5□□□□□ -0.41
CCDC171-202ENST00000432954 SASH3O75995 380 aa12.5□□□□□ -0.41
CCDC171-202ENST00000432954 CA8P35219 290 aa12.5□□□□□ -0.41
CCDC171-202ENST00000432954 PAPOLAP51003 745 aaKnown RBP12.5□□□□□ -0.41
CCDC171-202ENST00000432954 KCNA1Q09470 495 aa12.5□□□□□ -0.41
CCDC171-202ENST00000432954 ERCC6LQ2NKX8 1250 aa12.5□□□□□ -0.41
CCDC171-202ENST00000432954 OLFML1Q6UWY5 402 aa12.5□□□□□ -0.41
CCDC171-202ENST00000432954 SEPT14Q6ZU15 432 aa12.5□□□□□ -0.41
CCDC171-202ENST00000432954 CDCA7LQ96GN5 454 aa12.5□□□□□ -0.41
CCDC171-202ENST00000432954 RSRC1Q96IZ7 334 aaKnown RBP12.5□□□□□ -0.41
CCDC171-202ENST00000432954 FBXO9Q9UK97 447 aaPredicted RBP12.5□□□□□ -0.41
CCDC171-202ENST00000432954 SCNN1BP51168 640 aa12.5□□□□□ -0.41
CCDC171-202ENST00000432954 MYBPC3Q14896 1274 aa12.5□□□□□ -0.41
CCDC171-202ENST00000432954 TMC6Q7Z403 805 aa12.5□□□□□ -0.41
CCDC171-202ENST00000432954 SPIRE2Q8WWL2 714 aa12.5□□□□□ -0.41
CCDC171-202ENST00000432954 CCDC47Q96A33 483 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms