RNA–Protein interactions for RNA: ENST00000432645.6

HDAC9-212, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-212ENST00000432645 TAF6LQ9Y6J9 622 aa9.98□□□□□ -0.81
HDAC9-212ENST00000432645 PLCH1Q4KWH8 1693 aa9.98□□□□□ -0.81
HDAC9-212ENST00000432645 IRS4O14654 1257 aaPredicted RBP9.98□□□□□ -0.81
HDAC9-212ENST00000432645 ZKSCAN1P17029 563 aaPredicted RBP9.98□□□□□ -0.81
HDAC9-212ENST00000432645 IL6STP40189 918 aaPredicted RBP9.98□□□□□ -0.81
HDAC9-212ENST00000432645 ITPK1Q13572 414 aa9.98□□□□□ -0.81
HDAC9-212ENST00000432645 GORABQ5T7V8 394 aa9.98□□□□□ -0.81
HDAC9-212ENST00000432645 CREB3L3Q68CJ9 461 aa9.98□□□□□ -0.81
HDAC9-212ENST00000432645 MCTP1Q6DN14 999 aa9.98□□□□□ -0.81
HDAC9-212ENST00000432645 MAP4K1Q92918 833 aa9.98□□□□□ -0.81
HDAC9-212ENST00000432645 TCEANC2Q96MN5 208 aa9.98□□□□□ -0.81
HDAC9-212ENST00000432645 SNRKQ9NRH2 765 aa9.98□□□□□ -0.81
HDAC9-212ENST00000432645 ZDHHC9Q9Y397 364 aa9.98□□□□□ -0.81
HDAC9-212ENST00000432645 ITGA6P23229 1130 aa9.97□□□□□ -0.81
HDAC9-212ENST00000432645 ADORA1P30542 326 aa9.97□□□□□ -0.81
HDAC9-212ENST00000432645 FKBP4Q02790 459 aaKnown RBP eCLIP9.97□□□□□ -0.81
HDAC9-212ENST00000432645 FOXD4L6Q3SYB3 417 aaPredicted RBP9.97□□□□□ -0.81
HDAC9-212ENST00000432645 INTS5Q6P9B9 1019 aaKnown RBP9.97□□□□□ -0.81
HDAC9-212ENST00000432645 FOXD4L3Q6VB84 417 aaPredicted RBP9.97□□□□□ -0.81
HDAC9-212ENST00000432645 LDHAL6AQ6ZMR3 332 aa9.97□□□□□ -0.81
HDAC9-212ENST00000432645 TTLL11Q8NHH1 800 aa9.97□□□□□ -0.81
HDAC9-212ENST00000432645 IL17RAQ96F46 866 aa9.97□□□□□ -0.81
HDAC9-212ENST00000432645 UBN2Q6ZU65 1347 aa9.97□□□□□ -0.81
HDAC9-212ENST00000432645 IFIT1P09914 478 aaKnown RBP9.97□□□□□ -0.81
HDAC9-212ENST00000432645 HSP90AB3PQ58FF7 597 aa9.97□□□□□ -0.81
HDAC9-212ENST00000432645 FAM182BQ5T319 152 aa9.97□□□□□ -0.81
HDAC9-212ENST00000432645 RUFY3Q7L099 469 aa9.97□□□□□ -0.81
HDAC9-212ENST00000432645 TTC14Q96N46 770 aa9.97□□□□□ -0.81
HDAC9-212ENST00000432645 PAG1Q9NWQ8 432 aa9.97□□□□□ -0.81
HDAC9-212ENST00000432645 CYP2E1P05181 493 aaPredicted RBP9.96□□□□□ -0.81
HDAC9-212ENST00000432645 CSF1RP07333 972 aa9.96□□□□□ -0.81
HDAC9-212ENST00000432645 XRCC6P12956 609 aaKnown RBP eCLIP9.96□□□□□ -0.81
HDAC9-212ENST00000432645 MMP14P50281 582 aa9.96□□□□□ -0.81
HDAC9-212ENST00000432645 CUL4AQ13619 759 aa9.96□□□□□ -0.81
HDAC9-212ENST00000432645 CCDC87Q9NVE4 849 aa9.96□□□□□ -0.81
HDAC9-212ENST00000432645 DOT1LQ8TEK3 1739 aa9.96□□□□□ -0.81
HDAC9-212ENST00000432645 SLC27A2O14975 620 aa9.96□□□□□ -0.82
HDAC9-212ENST00000432645 TAF5LO75529 589 aa9.96□□□□□ -0.82
HDAC9-212ENST00000432645 CIAO1O76071 339 aa9.96□□□□□ -0.82
HDAC9-212ENST00000432645 HCLS1P14317 486 aaPredicted RBP9.96□□□□□ -0.82
HDAC9-212ENST00000432645 SMIM5Q71RC9 77 aa9.96□□□□□ -0.82
HDAC9-212ENST00000432645 PTF1AQ7RTS3 328 aa9.96□□□□□ -0.82
HDAC9-212ENST00000432645 SMAP1Q8IYB5 467 aaPredicted RBP9.96□□□□□ -0.82
HDAC9-212ENST00000432645 PDRG1Q9NUG6 133 aa9.96□□□□□ -0.82
HDAC9-212ENST00000432645 LARGE1O95461 756 aa9.96□□□□□ -0.82
HDAC9-212ENST00000432645 EIF5P55010 431 aaKnown RBP9.96□□□□□ -0.82
HDAC9-212ENST00000432645 CTSWP56202 376 aa9.96□□□□□ -0.82
HDAC9-212ENST00000432645 METTL24Q5JXM2 366 aa9.96□□□□□ -0.82
HDAC9-212ENST00000432645 KBTBD3Q8NAB2 608 aa9.96□□□□□ -0.82
HDAC9-212ENST00000432645 XAGE2Q96GT9 111 aa9.96□□□□□ -0.82
HDAC9-212ENST00000432645 CNNM1Q9NRU3 951 aa9.96□□□□□ -0.82
HDAC9-212ENST00000432645 CYP46A1Q9Y6A2 500 aa9.96□□□□□ -0.82
HDAC9-212ENST00000432645 GOLGA6L22H0YM25 854 aa9.95□□□□□ -0.82
HDAC9-212ENST00000432645 CLSTN1O94985 981 aa9.95□□□□□ -0.82
HDAC9-212ENST00000432645 PI16Q6UXB8 463 aa9.95□□□□□ -0.82
HDAC9-212ENST00000432645 BARGINQ6ZT62 677 aa9.95□□□□□ -0.82
HDAC9-212ENST00000432645 PLA2G12BQ9BX93 195 aa9.95□□□□□ -0.82
HDAC9-212ENST00000432645 GPR108Q9NPR9 543 aa9.95□□□□□ -0.82
HDAC9-212ENST00000432645 LIMCH1Q9UPQ0 1083 aa9.95□□□□□ -0.82
HDAC9-212ENST00000432645 PALLDQ8WX93 1383 aa9.95□□□□□ -0.82
HDAC9-212ENST00000432645 MED23Q9ULK4 1368 aa9.95□□□□□ -0.82
HDAC9-212ENST00000432645 ZNF609O15014 1411 aa9.95□□□□□ -0.82
HDAC9-212ENST00000432645 ERVV-1B6SEH8 477 aa9.95□□□□□ -0.82
HDAC9-212ENST00000432645 TTC39AQ5SRH9 613 aa9.95□□□□□ -0.82
HDAC9-212ENST00000432645 SUSD4Q5VX71 490 aa9.95□□□□□ -0.82
HDAC9-212ENST00000432645 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.94□□□□□ -0.82
HDAC9-212ENST00000432645 ANKRD18BA2A2Z9 1011 aa9.94□□□□□ -0.82
HDAC9-212ENST00000432645 CLGNO14967 610 aa9.94□□□□□ -0.82
HDAC9-212ENST00000432645 SCARF1Q14162 830 aa9.94□□□□□ -0.82
HDAC9-212ENST00000432645 MCMDC2Q4G0Z9 681 aa9.94□□□□□ -0.82
HDAC9-212ENST00000432645 HELBQ8NG08 1087 aaPredicted RBP9.94□□□□□ -0.82
HDAC9-212ENST00000432645 ZSWIM6Q9HCJ5 1215 aa9.94□□□□□ -0.82
HDAC9-212ENST00000432645 SLIT2O94813 1529 aa9.94□□□□□ -0.82
HDAC9-212ENST00000432645 LRP6O75581 1613 aa9.94□□□□□ -0.82
HDAC9-212ENST00000432645 CCDC158Q5M9N0 1113 aa9.94□□□□□ -0.82
HDAC9-212ENST00000432645 VPS53Q5VIR6 699 aa9.94□□□□□ -0.82
HDAC9-212ENST00000432645 RNF20Q5VTR2 975 aa9.94□□□□□ -0.82
HDAC9-212ENST00000432645 CCDC83Q8IWF9 413 aa9.94□□□□□ -0.82
HDAC9-212ENST00000432645 ZNF34Q8IZ26 560 aa9.94□□□□□ -0.82
HDAC9-212ENST00000432645 INTS4Q96HW7 963 aaKnown RBP9.94□□□□□ -0.82
HDAC9-212ENST00000432645 CDHR2Q9BYE9 1310 aa9.94□□□□□ -0.82
HDAC9-212ENST00000432645 NRAPQ86VF7 1730 aa9.94□□□□□ -0.82
HDAC9-212ENST00000432645 PDE8AO60658 829 aa9.93□□□□□ -0.82
HDAC9-212ENST00000432645 PTMAP06454 111 aaKnown RBP9.93□□□□□ -0.82
HDAC9-212ENST00000432645 TMED8Q6PL24 325 aaPredicted RBP9.93□□□□□ -0.82
HDAC9-212ENST00000432645 NECAB1Q8N987 351 aa9.93□□□□□ -0.82
HDAC9-212ENST00000432645 ARID3AQ99856 593 aa9.93□□□□□ -0.82
HDAC9-212ENST00000432645 AKAP2Q9Y2D5 859 aa9.93□□□□□ -0.82
HDAC9-212ENST00000432645 RIPOR2Q9Y4F9 1068 aa9.93□□□□□ -0.82
HDAC9-212ENST00000432645 DDX49Q9Y6V7 483 aaKnown RBP9.93□□□□□ -0.82
HDAC9-212ENST00000432645 PRPF40AO75400 957 aaKnown RBP9.93□□□□□ -0.82
HDAC9-212ENST00000432645 FAM193AP78312 1265 aa9.93□□□□□ -0.82
HDAC9-212ENST00000432645 IRX3P78415 501 aaPredicted RBP9.93□□□□□ -0.82
HDAC9-212ENST00000432645 KCNB2Q92953 911 aa9.93□□□□□ -0.82
HDAC9-212ENST00000432645 NIP7Q9Y221 180 aaKnown RBP eCLIP9.93□□□□□ -0.82
HDAC9-212ENST00000432645 SNAP23O00161 211 aa9.93□□□□□ -0.82
HDAC9-212ENST00000432645 ATP2B3Q16720 1220 aa9.93□□□□□ -0.82
HDAC9-212ENST00000432645 BLOC1S2Q6QNY1 142 aa9.93□□□□□ -0.82
HDAC9-212ENST00000432645 CLEC17AQ6ZS10 378 aa9.93□□□□□ -0.82
HDAC9-212ENST00000432645 CAMTA2O94983 1202 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms