RNA–Protein interactions for RNA: ENST00000432103.6

RTN1-204, Transcript of reticulon 1, humanhuman

TSL 1 (best)

Gene RTN1, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-204ENST00000432103 RPGRQ92834 1020 aaKnown RBP16.79■□□□□ 0.28
RTN1-204ENST00000432103 NEUROD6Q96NK8 337 aa16.79■□□□□ 0.28
RTN1-204ENST00000432103 SEC31BQ9NQW1 1179 aa16.79■□□□□ 0.28
RTN1-204ENST00000432103 BSDC1Q9NW68 430 aaPredicted RBP16.79■□□□□ 0.28
RTN1-204ENST00000432103 LRP5O75197 1615 aa16.79■□□□□ 0.28
RTN1-204ENST00000432103 PDE8BO95263 885 aa16.78■□□□□ 0.28
RTN1-204ENST00000432103 DDR1Q08345 913 aa16.78■□□□□ 0.28
RTN1-204ENST00000432103 CNTROBQ8N137 903 aa16.78■□□□□ 0.28
RTN1-204ENST00000432103 A0A1B0GUL7 405 aa16.78■□□□□ 0.28
RTN1-204ENST00000432103 TRIM6-TRIM34B2RNG4 842 aa16.78■□□□□ 0.28
RTN1-204ENST00000432103 PI4K2BQ8TCG2 481 aa16.78■□□□□ 0.28
RTN1-204ENST00000432103 BRIP1Q9BX63 1249 aa16.78■□□□□ 0.28
RTN1-204ENST00000432103 ZNF609O15014 1411 aa16.77■□□□□ 0.28
RTN1-204ENST00000432103 MMP10P09238 476 aa16.77■□□□□ 0.28
RTN1-204ENST00000432103 SDSP20132 328 aa16.77■□□□□ 0.28
RTN1-204ENST00000432103 RPS8P62241 208 aaKnown RBP16.77■□□□□ 0.28
RTN1-204ENST00000432103 PUM3Q15397 648 aaKnown RBP16.77■□□□□ 0.28
RTN1-204ENST00000432103 CCDC158Q5M9N0 1113 aa16.77■□□□□ 0.28
RTN1-204ENST00000432103 GORABQ5T7V8 394 aa16.77■□□□□ 0.28
RTN1-204ENST00000432103 RBM17Q96I25 401 aaKnown RBP16.77■□□□□ 0.28
RTN1-204ENST00000432103 ATP5JP18859 108 aa16.76■□□□□ 0.27
RTN1-204ENST00000432103 ATP2B3Q16720 1220 aa16.76■□□□□ 0.27
RTN1-204ENST00000432103 PDE6BP35913 854 aa16.76■□□□□ 0.27
RTN1-204ENST00000432103 CRY2Q49AN0 593 aa16.76■□□□□ 0.27
RTN1-204ENST00000432103 LPIN2Q92539 896 aa16.76■□□□□ 0.27
RTN1-204ENST00000432103 ANKRD2Q9GZV1 360 aa16.76■□□□□ 0.27
RTN1-204ENST00000432103 DBNLQ9UJU6 430 aaKnown RBP16.76■□□□□ 0.27
RTN1-204ENST00000432103 GRAPQ13588 217 aa16.75■□□□□ 0.27
RTN1-204ENST00000432103 C3orf67Q6ZVT6 689 aa16.75■□□□□ 0.27
RTN1-204ENST00000432103 GRAPLQ8TC17 118 aaPredicted RBP16.75■□□□□ 0.27
RTN1-204ENST00000432103 RILPL2Q969X0 211 aa16.75■□□□□ 0.27
RTN1-204ENST00000432103 KLRG2A4D1S0 409 aaPredicted RBP16.75■□□□□ 0.27
RTN1-204ENST00000432103 SLC5A1P13866 664 aa16.75■□□□□ 0.27
RTN1-204ENST00000432103 TSHZ3Q63HK5 1081 aa16.75■□□□□ 0.27
RTN1-204ENST00000432103 TMC4Q7Z404 712 aa16.75■□□□□ 0.27
RTN1-204ENST00000432103 VGLL2Q8N8G2 317 aa16.75■□□□□ 0.27
RTN1-204ENST00000432103 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.75■□□□□ 0.27
RTN1-204ENST00000432103 EVI5LQ96CN4 794 aa16.75■□□□□ 0.27
RTN1-204ENST00000432103 DBNDD2Q9BQY9 259 aa16.75■□□□□ 0.27
RTN1-204ENST00000432103 IFIT1P09914 478 aaKnown RBP16.74■□□□□ 0.27
RTN1-204ENST00000432103 TIMM10P62072 90 aa16.74■□□□□ 0.27
RTN1-204ENST00000432103 TICAM2Q86XR7 235 aa16.74■□□□□ 0.27
RTN1-204ENST00000432103 CCDC24Q8N4L8 307 aa16.74■□□□□ 0.27
RTN1-204ENST00000432103 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.74■□□□□ 0.27
RTN1-204ENST00000432103 TLR7Q9NYK1 1049 aaKnown RBP16.73■□□□□ 0.27
RTN1-204ENST00000432103 NRXN2Q9P2S2 1712 aa16.73■□□□□ 0.27
RTN1-204ENST00000432103 HIP1O00291 1037 aa16.73■□□□□ 0.27
RTN1-204ENST00000432103 HOXA10P31260 410 aaPredicted RBP16.73■□□□□ 0.27
RTN1-204ENST00000432103 CHRNDQ07001 517 aa16.73■□□□□ 0.27
RTN1-204ENST00000432103 XAGE2Q96GT9 111 aa16.73■□□□□ 0.27
RTN1-204ENST00000432103 CRAMP1Q96RY5 1269 aa16.73■□□□□ 0.27
RTN1-204ENST00000432103 BBOX1O75936 387 aa16.72■□□□□ 0.27
RTN1-204ENST00000432103 TTC39AQ5SRH9 613 aa16.72■□□□□ 0.27
RTN1-204ENST00000432103 MSL1Q68DK7 614 aa16.72■□□□□ 0.27
RTN1-204ENST00000432103 CELF1Q92879 486 aaKnown RBP16.72■□□□□ 0.27
RTN1-204ENST00000432103 UPF1Q92900 1129 aaKnown RBP eCLIP16.72■□□□□ 0.27
RTN1-204ENST00000432103 UBE4AQ14139 1066 aa16.72■□□□□ 0.27
RTN1-204ENST00000432103 TBC1D9Q6ZT07 1266 aa16.72■□□□□ 0.27
RTN1-204ENST00000432103 UQCRFS1P1P0C7P4 283 aa16.71■□□□□ 0.27
RTN1-204ENST00000432103 FGFR2P21802 821 aa16.71■□□□□ 0.27
RTN1-204ENST00000432103 ALDH1B1P30837 517 aa16.71■□□□□ 0.27
RTN1-204ENST00000432103 ZNF512BQ96KM6 892 aaPredicted RBP16.71■□□□□ 0.27
RTN1-204ENST00000432103 BOLA2Q9H3K6 86 aa16.71■□□□□ 0.27
RTN1-204ENST00000432103 MINPP1Q9UNW1 487 aa16.71■□□□□ 0.27
RTN1-204ENST00000432103 TNRC6CQ9HCJ0 1690 aaKnown RBP16.71■□□□□ 0.27
RTN1-204ENST00000432103 NPR1P16066 1061 aa16.7■□□□□ 0.26
RTN1-204ENST00000432103 LRRFIP1Q32MZ4 808 aaKnown RBP16.7■□□□□ 0.26
RTN1-204ENST00000432103 HAUS7Q99871 368 aa16.7■□□□□ 0.26
RTN1-204ENST00000432103 CASZ1Q86V15 1759 aa16.7■□□□□ 0.26
RTN1-204ENST00000432103 KCNJ4P48050 445 aa16.7■□□□□ 0.26
RTN1-204ENST00000432103 RUFY2Q8WXA3 655 aa16.7■□□□□ 0.26
RTN1-204ENST00000432103 TMX4Q9H1E5 349 aaPredicted RBP16.7■□□□□ 0.26
RTN1-204ENST00000432103 REC8O95072 547 aa16.69■□□□□ 0.26
RTN1-204ENST00000432103 HELBQ8NG08 1087 aaPredicted RBP16.69■□□□□ 0.26
RTN1-204ENST00000432103 MASTLQ96GX5 879 aa16.69■□□□□ 0.26
RTN1-204ENST00000432103 TAF5LO75529 589 aa16.68■□□□□ 0.26
RTN1-204ENST00000432103 CAVIN4Q5BKX8 364 aa16.68■□□□□ 0.26
RTN1-204ENST00000432103 GNL3LQ9NVN8 582 aaKnown RBP16.68■□□□□ 0.26
RTN1-204ENST00000432103 RFX7Q2KHR2 1363 aa16.68■□□□□ 0.26
RTN1-204ENST00000432103 H0YIN7 160 aa16.67■□□□□ 0.26
RTN1-204ENST00000432103 SRGNP10124 158 aa16.67■□□□□ 0.26
RTN1-204ENST00000432103 DIAPH3Q9NSV4 1193 aa16.67■□□□□ 0.26
RTN1-204ENST00000432103 LEMD3Q9Y2U8 911 aa16.67■□□□□ 0.26
RTN1-204ENST00000432103 MAP4K4O95819 1239 aaPredicted RBP16.67■□□□□ 0.26
RTN1-204ENST00000432103 CHMLP26374 656 aa16.67■□□□□ 0.26
RTN1-204ENST00000432103 TTF1Q15361 905 aaPredicted RBP16.67■□□□□ 0.26
RTN1-204ENST00000432103 DNAJC2Q99543 621 aaKnown RBP16.67■□□□□ 0.26
RTN1-204ENST00000432103 FSD1Q9BTV5 496 aa16.67■□□□□ 0.26
RTN1-204ENST00000432103 SPEF2Q9C093 1822 aa16.67■□□□□ 0.26
RTN1-204ENST00000432103 XDHP47989 1333 aa16.66■□□□□ 0.26
RTN1-204ENST00000432103 POLD1P28340 1107 aa16.66■□□□□ 0.26
RTN1-204ENST00000432103 ADORA1P30542 326 aa16.66■□□□□ 0.26
RTN1-204ENST00000432103 MFAP1P55081 439 aaKnown RBP16.66■□□□□ 0.26
RTN1-204ENST00000432103 PAG1Q9NWQ8 432 aa16.66■□□□□ 0.26
RTN1-204ENST00000432103 ANKIB1Q9P2G1 1089 aa16.66■□□□□ 0.26
RTN1-204ENST00000432103 CCDC102BQ68D86 513 aa16.66■□□□□ 0.26
RTN1-204ENST00000432103 STYK1Q6J9G0 422 aa16.66■□□□□ 0.26
RTN1-204ENST00000432103 ARAP2Q8WZ64 1704 aa16.65■□□□□ 0.26
RTN1-204ENST00000432103 EPB41L2O43491 1005 aaKnown RBP16.65■□□□□ 0.26
RTN1-204ENST00000432103 ARID4AP29374 1257 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms