RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 MEGF6O75095 1541 aa13.46□□□□□ -0.26
CLDN4-202ENST00000431918 TCIRG1Q13488 830 aa13.45□□□□□ -0.26
CLDN4-202ENST00000431918 CCDC183Q5T5S1 534 aa13.45□□□□□ -0.26
CLDN4-202ENST00000431918 SPC24Q8NBT2 197 aa13.45□□□□□ -0.26
CLDN4-202ENST00000431918 ATP6V1AP38606 617 aa13.45□□□□□ -0.26
CLDN4-202ENST00000431918 CPLX2Q6PUV4 134 aaKnown RBP13.45□□□□□ -0.26
CLDN4-202ENST00000431918 MAP4K1Q92918 833 aa13.45□□□□□ -0.26
CLDN4-202ENST00000431918 ZHX1Q9UKY1 873 aaPredicted RBP13.45□□□□□ -0.26
CLDN4-202ENST00000431918 JAK2O60674 1132 aa13.45□□□□□ -0.26
CLDN4-202ENST00000431918 SASS6Q6UVJ0 657 aa13.45□□□□□ -0.26
CLDN4-202ENST00000431918 TNMDQ9H2S6 317 aa13.45□□□□□ -0.26
CLDN4-202ENST00000431918 CTNNA3Q9UI47 895 aa13.45□□□□□ -0.26
CLDN4-202ENST00000431918 VIRMAQ69YN4 1812 aaKnown RBP13.45□□□□□ -0.26
CLDN4-202ENST00000431918 UBE2HP62256 183 aa13.45□□□□□ -0.26
CLDN4-202ENST00000431918 DDB1Q16531 1140 aa13.45□□□□□ -0.26
CLDN4-202ENST00000431918 CCDC73Q6ZRK6 1079 aa13.45□□□□□ -0.26
CLDN4-202ENST00000431918 PIGBQ92521 554 aa13.45□□□□□ -0.26
CLDN4-202ENST00000431918 XAGE2Q96GT9 111 aa13.45□□□□□ -0.26
CLDN4-202ENST00000431918 ZSWIM6Q9HCJ5 1215 aa13.45□□□□□ -0.26
CLDN4-202ENST00000431918 CDK11BP21127 795 aaKnown RBP13.44□□□□□ -0.26
CLDN4-202ENST00000431918 ITGA6P23229 1130 aa13.44□□□□□ -0.26
CLDN4-202ENST00000431918 TAF5LO75529 589 aa13.44□□□□□ -0.26
CLDN4-202ENST00000431918 ADORA1P30542 326 aa13.44□□□□□ -0.26
CLDN4-202ENST00000431918 ME1P48163 572 aa13.44□□□□□ -0.26
CLDN4-202ENST00000431918 AIDAQ96BJ3 306 aa13.44□□□□□ -0.26
CLDN4-202ENST00000431918 NUP62CLQ9H1M0 184 aa13.44□□□□□ -0.26
CLDN4-202ENST00000431918 FMN2Q9NZ56 1722 aa13.44□□□□□ -0.26
CLDN4-202ENST00000431918 TOPAZ1Q8N9V7 1692 aa13.44□□□□□ -0.26
CLDN4-202ENST00000431918 PXDNLA1KZ92 1463 aa13.44□□□□□ -0.26
CLDN4-202ENST00000431918 RNF113AO15541 343 aaKnown RBP13.44□□□□□ -0.26
CLDN4-202ENST00000431918 SYNE3Q6ZMZ3 975 aa13.44□□□□□ -0.26
CLDN4-202ENST00000431918 CCDC144CPQ8IYA2 1237 aa13.44□□□□□ -0.26
CLDN4-202ENST00000431918 NCOA5Q9HCD5 579 aaKnown RBP13.44□□□□□ -0.26
CLDN4-202ENST00000431918 BECN2A8MW95 431 aa13.43□□□□□ -0.26
CLDN4-202ENST00000431918 ZNF213O14771 459 aa13.43□□□□□ -0.26
CLDN4-202ENST00000431918 ATP2B1P20020 1258 aa13.43□□□□□ -0.26
CLDN4-202ENST00000431918 SLC9C2Q5TAH2 1124 aa13.43□□□□□ -0.26
CLDN4-202ENST00000431918 TTLL5Q6EMB2 1281 aa13.43□□□□□ -0.26
CLDN4-202ENST00000431918 CDC37L1Q7L3B6 337 aa13.43□□□□□ -0.26
CLDN4-202ENST00000431918 KDM6AO15550 1401 aaPredicted RBP13.43□□□□□ -0.26
CLDN4-202ENST00000431918 NCOA3Q9Y6Q9 1424 aa13.43□□□□□ -0.26
CLDN4-202ENST00000431918 PI16Q6UXB8 463 aa13.43□□□□□ -0.26
CLDN4-202ENST00000431918 ZBTB1Q9Y2K1 713 aa13.43□□□□□ -0.26
CLDN4-202ENST00000431918 GOLGA6L19H0YKK7 550 aa13.43□□□□□ -0.26
CLDN4-202ENST00000431918 NECTIN1Q15223 517 aa13.43□□□□□ -0.26
CLDN4-202ENST00000431918 CCDC82Q8N4S0 544 aa13.43□□□□□ -0.26
CLDN4-202ENST00000431918 LRP2BPQ9P2M1 347 aa13.43□□□□□ -0.26
CLDN4-202ENST00000431918 MST1RQ04912 1400 aa13.42□□□□□ -0.26
CLDN4-202ENST00000431918 CHMP4CQ96CF2 233 aa13.42□□□□□ -0.26
CLDN4-202ENST00000431918 HAUS7Q99871 368 aa13.42□□□□□ -0.26
CLDN4-202ENST00000431918 SDF4Q9BRK5 362 aa13.42□□□□□ -0.26
CLDN4-202ENST00000431918 CCDC192P0DO97 292 aa13.42□□□□□ -0.26
CLDN4-202ENST00000431918 IGHMBP2P38935 993 aaKnown RBP13.42□□□□□ -0.26
CLDN4-202ENST00000431918 ZAP70P43403 619 aa13.42□□□□□ -0.26
CLDN4-202ENST00000431918 TM6SF1Q9BZW5 370 aa13.42□□□□□ -0.26
CLDN4-202ENST00000431918 R3HCC1Q9Y3T6 440 aaKnown RBP13.42□□□□□ -0.26
CLDN4-202ENST00000431918 GOLGA8BA8MQT2 603 aa13.42□□□□□ -0.26
CLDN4-202ENST00000431918 ZSCAN30Q86W11 494 aa13.42□□□□□ -0.26
CLDN4-202ENST00000431918 TAF6LQ9Y6J9 622 aa13.42□□□□□ -0.26
CLDN4-202ENST00000431918 XRN1Q8IZH2 1706 aaKnown RBP13.42□□□□□ -0.26
CLDN4-202ENST00000431918 EPB41L2O43491 1005 aaKnown RBP13.41□□□□□ -0.26
CLDN4-202ENST00000431918 LETM1O95202 739 aaPredicted RBP13.41□□□□□ -0.26
CLDN4-202ENST00000431918 HMGB1P09429 215 aaKnown RBP13.41□□□□□ -0.26
CLDN4-202ENST00000431918 CCDC39Q9UFE4 941 aa13.41□□□□□ -0.26
CLDN4-202ENST00000431918 TDO2P48775 406 aa13.41□□□□□ -0.26
CLDN4-202ENST00000431918 ZNF445P59923 1031 aa13.41□□□□□ -0.26
CLDN4-202ENST00000431918 TRIM29Q14134 588 aa13.41□□□□□ -0.26
CLDN4-202ENST00000431918 STK38Q15208 465 aa13.41□□□□□ -0.26
CLDN4-202ENST00000431918 ZSCAN25Q6NSZ9 544 aa13.41□□□□□ -0.26
CLDN4-202ENST00000431918 NIP7Q9Y221 180 aaKnown RBP eCLIP13.41□□□□□ -0.26
CLDN4-202ENST00000431918 H7C1W4 665 aa13.41□□□□□ -0.26
CLDN4-202ENST00000431918 DHX32Q7L7V1 743 aaKnown RBP13.41□□□□□ -0.26
CLDN4-202ENST00000431918 SCAND2PQ9GZW5 306 aaPredicted RBP13.41□□□□□ -0.26
CLDN4-202ENST00000431918 CYP2E1P05181 493 aaPredicted RBP13.41□□□□□ -0.26
CLDN4-202ENST00000431918 CYP21A2P08686 494 aa13.41□□□□□ -0.26
CLDN4-202ENST00000431918 HLFQ16534 295 aa13.41□□□□□ -0.26
CLDN4-202ENST00000431918 NGLY1Q96IV0 654 aa13.41□□□□□ -0.26
CLDN4-202ENST00000431918 GREM2Q9H772 168 aa13.41□□□□□ -0.26
CLDN4-202ENST00000431918 RAI14Q9P0K7 980 aa13.41□□□□□ -0.26
CLDN4-202ENST00000431918 MTMR6Q9Y217 621 aa13.41□□□□□ -0.26
CLDN4-202ENST00000431918 NALCNQ8IZF0 1738 aa13.4□□□□□ -0.26
CLDN4-202ENST00000431918 MAP3K11Q16584 847 aa13.4□□□□□ -0.26
CLDN4-202ENST00000431918 LTN1O94822 1766 aa13.4□□□□□ -0.26
CLDN4-202ENST00000431918 KLF18A0A0U1RQI7 1052 aa13.4□□□□□ -0.26
CLDN4-202ENST00000431918 KINO60870 393 aaKnown RBP13.4□□□□□ -0.26
CLDN4-202ENST00000431918 NFAT5O94916 1531 aa13.4□□□□□ -0.26
CLDN4-202ENST00000431918 POLR3DP05423 398 aaPredicted RBP13.4□□□□□ -0.26
CLDN4-202ENST00000431918 RXRAP19793 462 aa13.4□□□□□ -0.26
CLDN4-202ENST00000431918 ERBB4Q15303 1308 aa13.4□□□□□ -0.26
CLDN4-202ENST00000431918 TTC14Q96N46 770 aa13.4□□□□□ -0.26
CLDN4-202ENST00000431918 MTMR7Q9Y216 660 aa13.4□□□□□ -0.26
CLDN4-202ENST00000431918 DHX16O60231 1041 aaKnown RBP13.39□□□□□ -0.27
CLDN4-202ENST00000431918 NUP133Q8WUM0 1156 aa13.39□□□□□ -0.27
CLDN4-202ENST00000431918 TRIM5Q9C035 493 aa13.39□□□□□ -0.27
CLDN4-202ENST00000431918 NAPBQ9H115 298 aa13.39□□□□□ -0.27
CLDN4-202ENST00000431918 PRDM10Q9NQV6 1147 aa13.39□□□□□ -0.27
CLDN4-202ENST00000431918 DACT1Q9NYF0 836 aa13.39□□□□□ -0.27
CLDN4-202ENST00000431918 CFAP45Q9UL16 551 aa13.39□□□□□ -0.27
CLDN4-202ENST00000431918 ERICH2A1L162 156 aa13.39□□□□□ -0.27
CLDN4-202ENST00000431918 MINDY4BA8MYZ0 360 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms