RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 KRT10P13645 584 aa5.2□□□□□ -1.58
LRRK2-204ENST00000430804 GNAT2P19087 354 aa5.2□□□□□ -1.58
LRRK2-204ENST00000430804 ZNF157P51786 506 aaPredicted RBP5.2□□□□□ -1.58
LRRK2-204ENST00000430804 SASS6Q6UVJ0 657 aa5.2□□□□□ -1.58
LRRK2-204ENST00000430804 TEX11Q8IYF3 940 aa5.2□□□□□ -1.58
LRRK2-204ENST00000430804 GSDMBQ8TAX9 411 aa5.2□□□□□ -1.58
LRRK2-204ENST00000430804 CHURC1Q8WUH1 139 aa5.2□□□□□ -1.58
LRRK2-204ENST00000430804 DNAAF4Q8WXU2 420 aa5.2□□□□□ -1.58
LRRK2-204ENST00000430804 RUFY1Q96T51 708 aa5.2□□□□□ -1.58
LRRK2-204ENST00000430804 DEF6Q9H4E7 631 aa5.2□□□□□ -1.58
LRRK2-204ENST00000430804 KIF4BQ2VIQ3 1234 aa5.2□□□□□ -1.58
LRRK2-204ENST00000430804 CCDC77Q9BR77 488 aa5.2□□□□□ -1.58
LRRK2-204ENST00000430804 TCP11L1Q9NUJ3 509 aa5.2□□□□□ -1.58
LRRK2-204ENST00000430804 PTPRCP08575 1304 aa5.2□□□□□ -1.58
LRRK2-204ENST00000430804 PDIA4P13667 645 aaKnown RBP5.2□□□□□ -1.58
LRRK2-204ENST00000430804 ZSCAN20P17040 1043 aaPredicted RBP5.2□□□□□ -1.58
LRRK2-204ENST00000430804 NFKBIAP25963 317 aa5.2□□□□□ -1.58
LRRK2-204ENST00000430804 HIBADHP31937 336 aaKnown RBP5.2□□□□□ -1.58
LRRK2-204ENST00000430804 FGD6Q6ZV73 1430 aa5.2□□□□□ -1.58
LRRK2-204ENST00000430804 NCAPG2Q86XI2 1143 aa5.2□□□□□ -1.58
LRRK2-204ENST00000430804 APOBEC3FQ8IUX4 373 aaKnown RBP5.2□□□□□ -1.58
LRRK2-204ENST00000430804 EXOC8Q8IYI6 725 aa5.2□□□□□ -1.58
LRRK2-204ENST00000430804 NSMCE1Q8WV22 266 aa5.2□□□□□ -1.58
LRRK2-204ENST00000430804 VAT1LQ9HCJ6 419 aa5.2□□□□□ -1.58
LRRK2-204ENST00000430804 SLC12A7Q9Y666 1083 aa5.2□□□□□ -1.58
LRRK2-204ENST00000430804 GNAT1P11488 350 aa5.19□□□□□ -1.58
LRRK2-204ENST00000430804 CTNNA2P26232 953 aa5.19□□□□□ -1.58
LRRK2-204ENST00000430804 PDE4AP27815 886 aa5.19□□□□□ -1.58
LRRK2-204ENST00000430804 FILIP1Q7Z7B0 1213 aa5.19□□□□□ -1.58
LRRK2-204ENST00000430804 TMTC2Q8N394 836 aa5.19□□□□□ -1.58
LRRK2-204ENST00000430804 CCDC102AQ96A19 550 aa5.19□□□□□ -1.58
LRRK2-204ENST00000430804 ADD3Q9UEY8 706 aaKnown RBP5.19□□□□□ -1.58
LRRK2-204ENST00000430804 ZNF608Q9ULD9 1512 aaPredicted RBP5.19□□□□□ -1.58
LRRK2-204ENST00000430804 M0R2C6 588 aa5.19□□□□□ -1.58
LRRK2-204ENST00000430804 ZNF213O14771 459 aa5.19□□□□□ -1.58
LRRK2-204ENST00000430804 CCDC172P0C7W6 258 aa5.19□□□□□ -1.58
LRRK2-204ENST00000430804 FOSBP53539 338 aa5.19□□□□□ -1.58
LRRK2-204ENST00000430804 EN1Q05925 392 aaPredicted RBP5.19□□□□□ -1.58
LRRK2-204ENST00000430804 MLXIPQ9HAP2 919 aa5.19□□□□□ -1.58
LRRK2-204ENST00000430804 GAS8O95995 478 aa5.19□□□□□ -1.58
LRRK2-204ENST00000430804 ZFYP08048 801 aaPredicted RBP5.19□□□□□ -1.58
LRRK2-204ENST00000430804 NBPF7P0C2Y1 421 aaPredicted RBP5.19□□□□□ -1.58
LRRK2-204ENST00000430804 MCM10Q7L590 875 aa5.19□□□□□ -1.58
LRRK2-204ENST00000430804 GJD4Q96KN9 370 aaPredicted RBP5.19□□□□□ -1.58
LRRK2-204ENST00000430804 IFT74Q96LB3 600 aa5.19□□□□□ -1.58
LRRK2-204ENST00000430804 CACYBPQ9HB71 228 aaKnown RBP5.19□□□□□ -1.58
LRRK2-204ENST00000430804 KRT13P13646 458 aa5.19□□□□□ -1.58
LRRK2-204ENST00000430804 RNASELQ05823 741 aaKnown RBP5.19□□□□□ -1.58
LRRK2-204ENST00000430804 ATP2B3Q16720 1220 aa5.19□□□□□ -1.58
LRRK2-204ENST00000430804 MFSD6Q6ZSS7 791 aa5.19□□□□□ -1.58
LRRK2-204ENST00000430804 TNS4Q8IZW8 715 aa5.19□□□□□ -1.58
LRRK2-204ENST00000430804 PSMD1Q99460 953 aa5.19□□□□□ -1.58
LRRK2-204ENST00000430804 PUF60Q9UHX1 559 aaKnown RBP5.19□□□□□ -1.58
LRRK2-204ENST00000430804 GINS2Q9Y248 185 aa5.19□□□□□ -1.58
LRRK2-204ENST00000430804 CAMSAP2Q08AD1 1489 aa5.19□□□□□ -1.58
LRRK2-204ENST00000430804 XPOTO43592 962 aaKnown RBP5.19□□□□□ -1.58
LRRK2-204ENST00000430804 SEC24BO95487 1268 aa5.19□□□□□ -1.58
LRRK2-204ENST00000430804 RARSP54136 660 aaKnown RBP5.19□□□□□ -1.58
LRRK2-204ENST00000430804 PDE4DQ08499 809 aa5.19□□□□□ -1.58
LRRK2-204ENST00000430804 PTGDRQ13258 359 aa5.19□□□□□ -1.58
LRRK2-204ENST00000430804 DHX8Q14562 1220 aaKnown RBP5.19□□□□□ -1.58
LRRK2-204ENST00000430804 RDH13Q8NBN7 331 aa5.19□□□□□ -1.58
LRRK2-204ENST00000430804 GABPB2Q8TAK5 448 aaPredicted RBP5.19□□□□□ -1.58
LRRK2-204ENST00000430804 MYO3BQ8WXR4 1341 aa5.18□□□□□ -1.58
LRRK2-204ENST00000430804 EIF5P55010 431 aaKnown RBP5.18□□□□□ -1.58
LRRK2-204ENST00000430804 DUSP27Q5VZP5 1158 aa5.18□□□□□ -1.58
LRRK2-204ENST00000430804 NME9Q86XW9 330 aa5.18□□□□□ -1.58
LRRK2-204ENST00000430804 ANKRD35Q8N283 1001 aa5.18□□□□□ -1.58
LRRK2-204ENST00000430804 CYP46A1Q9Y6A2 500 aa5.18□□□□□ -1.58
LRRK2-204ENST00000430804 ARHGEF11O15085 1522 aa5.18□□□□□ -1.58
LRRK2-204ENST00000430804 STAMBPO95630 424 aa5.18□□□□□ -1.58
LRRK2-204ENST00000430804 NPR1P16066 1061 aa5.18□□□□□ -1.58
LRRK2-204ENST00000430804 XPAP23025 273 aaPredicted RBP5.18□□□□□ -1.58
LRRK2-204ENST00000430804 COPB2P35606 906 aa5.18□□□□□ -1.58
LRRK2-204ENST00000430804 TRMT1LQ7Z2T5 733 aaKnown RBP5.18□□□□□ -1.58
LRRK2-204ENST00000430804 DAAM2Q86T65 1068 aa5.18□□□□□ -1.58
LRRK2-204ENST00000430804 RNF169Q8NCN4 708 aa5.18□□□□□ -1.58
LRRK2-204ENST00000430804 ESR2Q92731 530 aa5.18□□□□□ -1.58
LRRK2-204ENST00000430804 GCC1Q96CN9 775 aa5.18□□□□□ -1.58
LRRK2-204ENST00000430804 RPS6KC1Q96S38 1066 aa5.18□□□□□ -1.58
LRRK2-204ENST00000430804 MFSD1Q9H3U5 465 aa5.18□□□□□ -1.58
LRRK2-204ENST00000430804 CNNM2Q9H8M5 875 aa5.18□□□□□ -1.58
LRRK2-204ENST00000430804 EVA1BQ9NVM1 165 aa5.18□□□□□ -1.58
LRRK2-204ENST00000430804 ERICH3Q5RHP9 1530 aa5.18□□□□□ -1.58
LRRK2-204ENST00000430804 RNF34Q969K3 372 aa5.18□□□□□ -1.58
LRRK2-204ENST00000430804 KIF1BPQ96EK5 621 aa5.18□□□□□ -1.58
LRRK2-204ENST00000430804 RRP36Q96EU6 259 aaKnown RBP5.18□□□□□ -1.58
LRRK2-204ENST00000430804 IQSEC3Q9UPP2 1182 aaPredicted RBP5.18□□□□□ -1.58
LRRK2-204ENST00000430804 MAGEB6P1A0A0J9YX57 407 aa5.18□□□□□ -1.58
LRRK2-204ENST00000430804 PPEF1O14829 653 aaPredicted RBP5.18□□□□□ -1.58
LRRK2-204ENST00000430804 IFIT3O14879 490 aaKnown RBP5.18□□□□□ -1.58
LRRK2-204ENST00000430804 VEGFAP15692 232 aaPredicted RBP5.18□□□□□ -1.58
LRRK2-204ENST00000430804 ATF7P17544 494 aaPredicted RBP5.18□□□□□ -1.58
LRRK2-204ENST00000430804 TTC12Q9H892 705 aaPredicted RBP5.18□□□□□ -1.58
LRRK2-204ENST00000430804 ZNF335Q9H4Z2 1342 aaPredicted RBP5.18□□□□□ -1.58
LRRK2-204ENST00000430804 KINO60870 393 aaKnown RBP5.18□□□□□ -1.58
LRRK2-204ENST00000430804 E2F5Q15329 346 aa5.18□□□□□ -1.58
LRRK2-204ENST00000430804 GANCQ8TET4 914 aa5.18□□□□□ -1.58
LRRK2-204ENST00000430804 ERO1AQ96HE7 468 aa5.18□□□□□ -1.58
LRRK2-204ENST00000430804 JPH2Q9BR39 696 aaPredicted RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms