RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 ICA1Q05084 483 aa8.58□□□□□ -1.04
SYNPO2-202ENST00000429713 CCDC92Q53HC0 331 aaPredicted RBP8.58□□□□□ -1.04
SYNPO2-202ENST00000429713 MIS12Q9H081 205 aa8.58□□□□□ -1.04
SYNPO2-202ENST00000429713 ARHGAP31Q2M1Z3 1444 aa8.58□□□□□ -1.04
SYNPO2-202ENST00000429713 RASSF2P50749 326 aa8.58□□□□□ -1.04
SYNPO2-202ENST00000429713 CACNA2D3Q8IZS8 1091 aa8.58□□□□□ -1.04
SYNPO2-202ENST00000429713 PHLPP2Q6ZVD8 1323 aa8.58□□□□□ -1.04
SYNPO2-202ENST00000429713 STK3Q13188 491 aa8.58□□□□□ -1.04
SYNPO2-202ENST00000429713 PDRG1Q9NUG6 133 aa8.58□□□□□ -1.04
SYNPO2-202ENST00000429713 ATXN2Q99700 1313 aaKnown RBP8.58□□□□□ -1.04
SYNPO2-202ENST00000429713 CAMK4Q16566 473 aa8.58□□□□□ -1.04
SYNPO2-202ENST00000429713 LAMC1P11047 1609 aa8.58□□□□□ -1.04
SYNPO2-202ENST00000429713 PSDA5PKW4 1024 aaPredicted RBP8.58□□□□□ -1.04
SYNPO2-202ENST00000429713 GBP1P32455 592 aa8.58□□□□□ -1.04
SYNPO2-202ENST00000429713 IRX4P78413 519 aa8.58□□□□□ -1.04
SYNPO2-202ENST00000429713 SERPINC1P01008 464 aa8.58□□□□□ -1.04
SYNPO2-202ENST00000429713 STIM2Q9P246 746 aa8.58□□□□□ -1.04
SYNPO2-202ENST00000429713 CFAP58Q5T655 872 aa8.57□□□□□ -1.04
SYNPO2-202ENST00000429713 TAOK3Q9H2K8 898 aa8.57□□□□□ -1.04
SYNPO2-202ENST00000429713 PRDM4Q9UKN5 801 aa8.57□□□□□ -1.04
SYNPO2-202ENST00000429713 MAGI3Q5TCQ9 1506 aa8.57□□□□□ -1.04
SYNPO2-202ENST00000429713 VAV2P52735 878 aa8.57□□□□□ -1.04
SYNPO2-202ENST00000429713 SWT1Q5T5J6 900 aaKnown RBP8.57□□□□□ -1.04
SYNPO2-202ENST00000429713 PLCD3Q8N3E9 789 aa8.57□□□□□ -1.04
SYNPO2-202ENST00000429713 MICALL1Q8N3F8 863 aa8.57□□□□□ -1.04
SYNPO2-202ENST00000429713 IQCGQ9H095 443 aaKnown RBP8.57□□□□□ -1.04
SYNPO2-202ENST00000429713 RBM27Q9P2N5 1060 aaKnown RBP8.57□□□□□ -1.04
SYNPO2-202ENST00000429713 ODF2LQ9ULJ1 636 aa8.57□□□□□ -1.04
SYNPO2-202ENST00000429713 RTEL1-TNFRSF6BF6WH68 1400 aa8.57□□□□□ -1.04
SYNPO2-202ENST00000429713 CTAGE15A4D2H0 777 aa8.57□□□□□ -1.04
SYNPO2-202ENST00000429713 TACC1O75410 805 aa8.57□□□□□ -1.04
SYNPO2-202ENST00000429713 SEC24BO95487 1268 aa8.57□□□□□ -1.04
SYNPO2-202ENST00000429713 CTAGE8P0CG41 777 aa8.57□□□□□ -1.04
SYNPO2-202ENST00000429713 NAP1L1P55209 391 aaKnown RBP8.57□□□□□ -1.04
SYNPO2-202ENST00000429713 CTAGE6Q86UF2 777 aa8.57□□□□□ -1.04
SYNPO2-202ENST00000429713 CTAGE4Q8IX94 777 aa8.57□□□□□ -1.04
SYNPO2-202ENST00000429713 C3orf20Q8ND61 904 aa8.57□□□□□ -1.04
SYNPO2-202ENST00000429713 CFAP57Q96MR6 1250 aa8.57□□□□□ -1.04
SYNPO2-202ENST00000429713 TUBA8Q9NY65 449 aaPredicted RBP8.57□□□□□ -1.04
SYNPO2-202ENST00000429713 MYO10Q9HD67 2058 aa8.57□□□□□ -1.04
SYNPO2-202ENST00000429713 PSME1Q06323 249 aa8.57□□□□□ -1.04
SYNPO2-202ENST00000429713 YY1P25490 414 aa8.57□□□□□ -1.04
SYNPO2-202ENST00000429713 TSC1Q92574 1164 aa8.57□□□□□ -1.04
SYNPO2-202ENST00000429713 KDM4AO75164 1064 aa8.57□□□□□ -1.04
SYNPO2-202ENST00000429713 SFSWAPQ12872 951 aaKnown RBP8.57□□□□□ -1.04
SYNPO2-202ENST00000429713 KANK3Q6NY19 840 aa8.57□□□□□ -1.04
SYNPO2-202ENST00000429713 CHCHD3Q9NX63 227 aaKnown RBP8.57□□□□□ -1.04
SYNPO2-202ENST00000429713 EXOC6BQ9Y2D4 811 aa8.57□□□□□ -1.04
SYNPO2-202ENST00000429713 CTIFO43310 598 aaKnown RBP8.57□□□□□ -1.04
SYNPO2-202ENST00000429713 BLOC1S2Q6QNY1 142 aa8.57□□□□□ -1.04
SYNPO2-202ENST00000429713 PHLDB2Q86SQ0 1253 aa8.57□□□□□ -1.04
SYNPO2-202ENST00000429713 SMARCA5O60264 1052 aaPredicted RBP8.56□□□□□ -1.04
SYNPO2-202ENST00000429713 ATP11AP98196 1134 aa8.56□□□□□ -1.04
SYNPO2-202ENST00000429713 LRRC23Q53EV4 343 aaPredicted RBP8.56□□□□□ -1.04
SYNPO2-202ENST00000429713 HOOK3Q86VS8 718 aa8.56□□□□□ -1.04
SYNPO2-202ENST00000429713 SUGP1Q8IWZ8 645 aaKnown RBP8.56□□□□□ -1.04
SYNPO2-202ENST00000429713 ADCY10Q96PN6 1610 aa8.56□□□□□ -1.04
SYNPO2-202ENST00000429713 ARHGEF5Q12774 1597 aa8.56□□□□□ -1.04
SYNPO2-202ENST00000429713 CEP170Q5SW79 1584 aa8.56□□□□□ -1.04
SYNPO2-202ENST00000429713 RRS1Q15050 365 aaKnown RBP8.56□□□□□ -1.04
SYNPO2-202ENST00000429713 ARHGAP24Q8N264 748 aa8.56□□□□□ -1.04
SYNPO2-202ENST00000429713 RRP36Q96EU6 259 aaKnown RBP8.56□□□□□ -1.04
SYNPO2-202ENST00000429713 RAB11FIP3O75154 756 aa8.56□□□□□ -1.04
SYNPO2-202ENST00000429713 HDGFL1Q5TGJ6 251 aa8.56□□□□□ -1.04
SYNPO2-202ENST00000429713 TEX11Q8IYF3 940 aa8.56□□□□□ -1.04
SYNPO2-202ENST00000429713 NEUROD6Q96NK8 337 aa8.56□□□□□ -1.04
SYNPO2-202ENST00000429713 KDM5BQ9UGL1 1544 aa8.56□□□□□ -1.04
SYNPO2-202ENST00000429713 CREB3O43889 395 aa8.56□□□□□ -1.04
SYNPO2-202ENST00000429713 ALDH3A1P30838 453 aa8.56□□□□□ -1.04
SYNPO2-202ENST00000429713 PHAXQ9H814 394 aaKnown RBP8.56□□□□□ -1.04
SYNPO2-202ENST00000429713 TRIM14Q14142 442 aa8.56□□□□□ -1.04
SYNPO2-202ENST00000429713 SAAL1Q96ER3 474 aa8.56□□□□□ -1.04
SYNPO2-202ENST00000429713 PPFIA2O75334 1257 aa8.56□□□□□ -1.04
SYNPO2-202ENST00000429713 SESN3P58005 492 aa8.56□□□□□ -1.04
SYNPO2-202ENST00000429713 LIMCH1Q9UPQ0 1083 aa8.56□□□□□ -1.04
SYNPO2-202ENST00000429713 SPATA31E1Q6ZUB1 1445 aa8.56□□□□□ -1.04
SYNPO2-202ENST00000429713 ARHGAP6O43182 974 aa8.56□□□□□ -1.04
SYNPO2-202ENST00000429713 TROVE2P10155 538 aaKnown RBP eCLIP8.56□□□□□ -1.04
SYNPO2-202ENST00000429713 MMP14P50281 582 aa8.56□□□□□ -1.04
SYNPO2-202ENST00000429713 SDCCAG8Q86SQ7 713 aaPredicted RBP8.56□□□□□ -1.04
SYNPO2-202ENST00000429713 SEC62Q99442 399 aaKnown RBP8.56□□□□□ -1.04
SYNPO2-202ENST00000429713 PAIP2BQ9ULR5 123 aaKnown RBP8.56□□□□□ -1.04
SYNPO2-202ENST00000429713 ADGRL2O95490 1459 aa8.56□□□□□ -1.04
SYNPO2-202ENST00000429713 PPP1R12BO60237 982 aaPredicted RBP8.56□□□□□ -1.04
SYNPO2-202ENST00000429713 HSF2BPO75031 334 aa8.56□□□□□ -1.04
SYNPO2-202ENST00000429713 ANTXR1Q9H6X2 564 aa8.56□□□□□ -1.04
SYNPO2-202ENST00000429713 WASHC4Q2M389 1173 aa8.55□□□□□ -1.04
SYNPO2-202ENST00000429713 FAM177A1Q8N128 213 aaPredicted RBP8.55□□□□□ -1.04
SYNPO2-202ENST00000429713 ZNF692Q9BU19 519 aaPredicted RBP8.55□□□□□ -1.04
SYNPO2-202ENST00000429713 AOX1Q06278 1338 aa8.55□□□□□ -1.04
SYNPO2-202ENST00000429713 RUFY4Q6ZNE9 571 aa8.55□□□□□ -1.04
SYNPO2-202ENST00000429713 ZNF280CQ8ND82 737 aa8.55□□□□□ -1.04
SYNPO2-202ENST00000429713 E9PCH4 1651 aa8.55□□□□□ -1.04
SYNPO2-202ENST00000429713 NEBLO76041 1014 aa8.55□□□□□ -1.04
SYNPO2-202ENST00000429713 XBP1P17861 261 aa8.55□□□□□ -1.04
SYNPO2-202ENST00000429713 SNCBQ16143 134 aa8.55□□□□□ -1.04
SYNPO2-202ENST00000429713 TTC22Q5TAA0 569 aa8.55□□□□□ -1.04
SYNPO2-202ENST00000429713 CFAP74Q9C0B2 1584 aa8.55□□□□□ -1.04
SYNPO2-202ENST00000429713 PAFAH1B1P43034 410 aa8.55□□□□□ -1.04
SYNPO2-202ENST00000429713 KIF24Q5T7B8 1368 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms