RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 CABP4P57796 275 aa15.76■□□□□ 0.11
SNRNP200-202ENST00000429650 LMBR1LQ6UX01 489 aa15.76■□□□□ 0.11
SNRNP200-202ENST00000429650 Q6ZUG5 572 aa15.76■□□□□ 0.11
SNRNP200-202ENST00000429650 DDX46Q7L014 1031 aaKnown RBP15.76■□□□□ 0.11
SNRNP200-202ENST00000429650 LEO1Q8WVC0 666 aaPredicted RBP15.76■□□□□ 0.11
SNRNP200-202ENST00000429650 NOLC1Q14978 699 aaKnown RBP eCLIP15.75■□□□□ 0.111e-25■□□□□ 9.5
SNRNP200-202ENST00000429650 CAMK4Q16566 473 aa15.75■□□□□ 0.11
SNRNP200-202ENST00000429650 KBTBD3Q8NAB2 608 aa15.75■□□□□ 0.11
SNRNP200-202ENST00000429650 FAM200AQ8TCP9 573 aa15.75■□□□□ 0.11
SNRNP200-202ENST00000429650 DACT1Q9NYF0 836 aa15.75■□□□□ 0.11
SNRNP200-202ENST00000429650 ATF3P18847 181 aa15.75■□□□□ 0.11
SNRNP200-202ENST00000429650 FOXO4P98177 505 aa15.75■□□□□ 0.11
SNRNP200-202ENST00000429650 TYRO3Q06418 890 aa15.75■□□□□ 0.11
SNRNP200-202ENST00000429650 MRVI1Q9Y6F6 885 aa15.75■□□□□ 0.11
SNRNP200-202ENST00000429650 SH3TC1Q8TE82 1336 aa15.75■□□□□ 0.11
SNRNP200-202ENST00000429650 LAMA4Q16363 1823 aa15.75■□□□□ 0.11
SNRNP200-202ENST00000429650 GOLGA6L4A6NEF3 574 aa15.74■□□□□ 0.11
SNRNP200-202ENST00000429650 DYNC1I1O14576 645 aa15.74■□□□□ 0.11
SNRNP200-202ENST00000429650 BRF1Q92994 677 aa15.74■□□□□ 0.11
SNRNP200-202ENST00000429650 PARP4Q9UKK3 1724 aaKnown RBP15.74■□□□□ 0.11
SNRNP200-202ENST00000429650 H7C1W4 665 aa15.74■□□□□ 0.11
SNRNP200-202ENST00000429650 RESTQ13127 1097 aa15.74■□□□□ 0.11
SNRNP200-202ENST00000429650 TNMDQ9H2S6 317 aa15.74■□□□□ 0.11
SNRNP200-202ENST00000429650 DDX19AQ9NUU7 478 aaKnown RBP15.74■□□□□ 0.11
SNRNP200-202ENST00000429650 PALLDQ8WX93 1383 aa15.74■□□□□ 0.11
SNRNP200-202ENST00000429650 NBPF26B4DH59 902 aa15.73■□□□□ 0.11
SNRNP200-202ENST00000429650 NBPF14Q5TI25 921 aa15.73■□□□□ 0.11
SNRNP200-202ENST00000429650 NBPF10Q6P3W6 841 aaKnown RBP15.73■□□□□ 0.11
SNRNP200-202ENST00000429650 STOX1Q6ZVD7 989 aa15.73■□□□□ 0.11
SNRNP200-202ENST00000429650 ATG9AQ7Z3C6 839 aa15.73■□□□□ 0.11
SNRNP200-202ENST00000429650 C17orf53Q8N3J3 647 aaPredicted RBP15.73■□□□□ 0.11
SNRNP200-202ENST00000429650 NBPF15Q8N660 670 aa15.73■□□□□ 0.11
SNRNP200-202ENST00000429650 SPTLC3Q9NUV7 552 aa15.73■□□□□ 0.11
SNRNP200-202ENST00000429650 TNS3Q68CZ2 1445 aa15.73■□□□□ 0.11
SNRNP200-202ENST00000429650 DNTTIP2Q5QJE6 756 aaKnown RBP15.73■□□□□ 0.11
SNRNP200-202ENST00000429650 RBM43Q6ZSC3 357 aaKnown RBP15.73■□□□□ 0.11
SNRNP200-202ENST00000429650 FAM13BQ9NYF5 915 aa15.73■□□□□ 0.11
SNRNP200-202ENST00000429650 BCCIPQ9P287 314 aaKnown RBP eCLIP15.73■□□□□ 0.11
SNRNP200-202ENST00000429650 CCDC9Q9Y3X0 531 aaKnown RBP15.73■□□□□ 0.11
SNRNP200-202ENST00000429650 SCRN1Q12765 414 aa15.72■□□□□ 0.11
SNRNP200-202ENST00000429650 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.72■□□□□ 0.11
SNRNP200-202ENST00000429650 CKAP2LQ8IYA6 745 aa15.72■□□□□ 0.11
SNRNP200-202ENST00000429650 PGBD1Q96JS3 809 aa15.72■□□□□ 0.11
SNRNP200-202ENST00000429650 LRRC2Q9BYS8 371 aa15.72■□□□□ 0.11
SNRNP200-202ENST00000429650 CLSTN2Q9H4D0 955 aa15.72■□□□□ 0.11
SNRNP200-202ENST00000429650 NUP188Q5SRE5 1749 aa15.72■□□□□ 0.11
SNRNP200-202ENST00000429650 SMARCC2Q8TAQ2 1214 aa15.72■□□□□ 0.11
SNRNP200-202ENST00000429650 TJP1Q07157 1748 aa15.72■□□□□ 0.11
SNRNP200-202ENST00000429650 TMEM94Q12767 1356 aa15.71■□□□□ 0.11
SNRNP200-202ENST00000429650 H3BQV1 296 aa15.71■□□□□ 0.11
SNRNP200-202ENST00000429650 GOLIM4O00461 696 aa15.71■□□□□ 0.11
SNRNP200-202ENST00000429650 IFFO2Q5TF58 517 aa15.71■□□□□ 0.11
SNRNP200-202ENST00000429650 DDX11Q96FC9 970 aa15.71■□□□□ 0.11
SNRNP200-202ENST00000429650 NEUROD6Q96NK8 337 aa15.71■□□□□ 0.11
SNRNP200-202ENST00000429650 KCNF1Q9H3M0 494 aa15.71■□□□□ 0.11
SNRNP200-202ENST00000429650 GPR108Q9NPR9 543 aa15.71■□□□□ 0.11
SNRNP200-202ENST00000429650 HELLSQ9NRZ9 838 aa15.71■□□□□ 0.11
SNRNP200-202ENST00000429650 PAG1Q9NWQ8 432 aa15.71■□□□□ 0.11
SNRNP200-202ENST00000429650 HMGB1P09429 215 aaKnown RBP15.71■□□□□ 0.11
SNRNP200-202ENST00000429650 SLFNL1Q499Z3 407 aa15.71■□□□□ 0.11
SNRNP200-202ENST00000429650 TTLL7Q6ZT98 887 aa15.71■□□□□ 0.11
SNRNP200-202ENST00000429650 LUZP1Q86V48 1076 aa15.71■□□□□ 0.11
SNRNP200-202ENST00000429650 CWC25Q9NXE8 425 aaPredicted RBP15.71■□□□□ 0.11
SNRNP200-202ENST00000429650 PFKFB2O60825 505 aa15.7■□□□□ 0.1
SNRNP200-202ENST00000429650 NR1I2O75469 434 aa15.7■□□□□ 0.1
SNRNP200-202ENST00000429650 TPM3P06753 285 aa15.7■□□□□ 0.1
SNRNP200-202ENST00000429650 DHX32Q7L7V1 743 aaKnown RBP15.7■□□□□ 0.1
SNRNP200-202ENST00000429650 SPC24Q8NBT2 197 aa15.7■□□□□ 0.1
SNRNP200-202ENST00000429650 MYRIPQ8NFW9 859 aa15.7■□□□□ 0.1
SNRNP200-202ENST00000429650 LLPHQ9BRT6 129 aaKnown RBP15.7■□□□□ 0.1
SNRNP200-202ENST00000429650 DSCC1Q9BVC3 393 aa15.7■□□□□ 0.1
SNRNP200-202ENST00000429650 ZSCAN16Q9H4T2 348 aaPredicted RBP15.7■□□□□ 0.1
SNRNP200-202ENST00000429650 DCCP43146 1447 aa15.7■□□□□ 0.1
SNRNP200-202ENST00000429650 TIMM10P62072 90 aa15.7■□□□□ 0.1
SNRNP200-202ENST00000429650 ANO6Q4KMQ2 910 aa15.7■□□□□ 0.1
SNRNP200-202ENST00000429650 BICD2Q8TD16 824 aa15.7■□□□□ 0.1
SNRNP200-202ENST00000429650 CBX8Q9HC52 389 aa15.7■□□□□ 0.1
SNRNP200-202ENST00000429650 MYH15Q9Y2K3 1946 aa15.7■□□□□ 0.1
SNRNP200-202ENST00000429650 IL15P40933 162 aaPredicted RBP15.69■□□□□ 0.1
SNRNP200-202ENST00000429650 ZMYM1Q5SVZ6 1142 aa15.69■□□□□ 0.1
SNRNP200-202ENST00000429650 NSUN7Q8NE18 718 aaKnown RBP15.69■□□□□ 0.1
SNRNP200-202ENST00000429650 PRIMPOLQ96LW4 560 aa15.69■□□□□ 0.1
SNRNP200-202ENST00000429650 MAP7D2Q96T17 732 aa15.69■□□□□ 0.1
SNRNP200-202ENST00000429650 CPDO75976 1380 aa15.69■□□□□ 0.1
SNRNP200-202ENST00000429650 UBR2Q8IWV8 1755 aa15.69■□□□□ 0.1
SNRNP200-202ENST00000429650 GOLGA6L6A8MZA4 724 aa15.69■□□□□ 0.1
SNRNP200-202ENST00000429650 TICAM2Q86XR7 235 aa15.69■□□□□ 0.1
SNRNP200-202ENST00000429650 KIAA1524Q8TCG1 905 aa15.69■□□□□ 0.1
SNRNP200-202ENST00000429650 AGXT2Q9BYV1 514 aa15.68■□□□□ 0.1
SNRNP200-202ENST00000429650 CFAP45Q9UL16 551 aa15.68■□□□□ 0.1
SNRNP200-202ENST00000429650 PYCARDQ9ULZ3 195 aa15.68■□□□□ 0.1
SNRNP200-202ENST00000429650 STRCP1A6NGW2 1772 aa15.68■□□□□ 0.1
SNRNP200-202ENST00000429650 CTDNEP1O95476 244 aa15.68■□□□□ 0.1
SNRNP200-202ENST00000429650 EXOSC10Q01780 885 aaKnown RBP15.68■□□□□ 0.1
SNRNP200-202ENST00000429650 LRRC24Q50LG9 513 aa15.68■□□□□ 0.1
SNRNP200-202ENST00000429650 SPATA31A3Q5VYP0 1347 aa15.68■□□□□ 0.1
SNRNP200-202ENST00000429650 EYA2O00167 538 aa15.67■□□□□ 0.1
SNRNP200-202ENST00000429650 HSPD1P10809 573 aaKnown RBP15.67■□□□□ 0.1
SNRNP200-202ENST00000429650 APOBRQ0VD83 1088 aa15.67■□□□□ 0.1
SNRNP200-202ENST00000429650 A0A0G2JLW4 131 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms