RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 FBXO3Q9UK99 471 aa16.74■□□□□ 0.27
SYNGAP1-203ENST00000428982 NSFL1CQ9UNZ2 370 aaKnown RBP16.74■□□□□ 0.27
SYNGAP1-203ENST00000428982 SHPRHQ149N8 1683 aa16.74■□□□□ 0.27
SYNGAP1-203ENST00000428982 PSMA5P28066 241 aa16.74■□□□□ 0.27
SYNGAP1-203ENST00000428982 ERCC6LQ2NKX8 1250 aa16.74■□□□□ 0.27
SYNGAP1-203ENST00000428982 FMNL3Q8IVF7 1028 aa16.74■□□□□ 0.27
SYNGAP1-203ENST00000428982 PPP1R12AO14974 1030 aaPredicted RBP16.74■□□□□ 0.27
SYNGAP1-203ENST00000428982 HMGB1P09429 215 aaKnown RBP16.74■□□□□ 0.27
SYNGAP1-203ENST00000428982 GSPT1P15170 499 aaKnown RBP16.74■□□□□ 0.27
SYNGAP1-203ENST00000428982 ACTN2P35609 894 aa16.74■□□□□ 0.27
SYNGAP1-203ENST00000428982 SNW1Q13573 536 aaKnown RBP16.74■□□□□ 0.27
SYNGAP1-203ENST00000428982 IGSF1Q8N6C5 1336 aa16.74■□□□□ 0.27
SYNGAP1-203ENST00000428982 IFIT2P09913 472 aaKnown RBP16.74■□□□□ 0.27
SYNGAP1-203ENST00000428982 AP1ARQ63HQ0 302 aa16.74■□□□□ 0.27
SYNGAP1-203ENST00000428982 EXOC6BQ9Y2D4 811 aa16.74■□□□□ 0.27
SYNGAP1-203ENST00000428982 ITSN1Q15811 1721 aa16.73■□□□□ 0.27
SYNGAP1-203ENST00000428982 AOX1Q06278 1338 aa16.73■□□□□ 0.27
SYNGAP1-203ENST00000428982 CLASRPQ8N2M8 674 aaKnown RBP16.73■□□□□ 0.27
SYNGAP1-203ENST00000428982 RNF217Q8TC41 542 aa16.73■□□□□ 0.27
SYNGAP1-203ENST00000428982 CCDC102AQ96A19 550 aa16.73■□□□□ 0.27
SYNGAP1-203ENST00000428982 BTG4Q9NY30 223 aa16.73■□□□□ 0.27
SYNGAP1-203ENST00000428982 PNMA6AP0CW24 399 aaPredicted RBP16.73■□□□□ 0.27
SYNGAP1-203ENST00000428982 SMC1AQ14683 1233 aaKnown RBP16.73■□□□□ 0.27
SYNGAP1-203ENST00000428982 SMARCE1Q969G3 411 aa16.73■□□□□ 0.27
SYNGAP1-203ENST00000428982 SPATA31A3Q5VYP0 1347 aa16.73■□□□□ 0.27
SYNGAP1-203ENST00000428982 CHAMP1Q96JM3 812 aa16.73■□□□□ 0.27
SYNGAP1-203ENST00000428982 PSMD1Q99460 953 aa16.73■□□□□ 0.27
SYNGAP1-203ENST00000428982 PDRG1Q9NUG6 133 aa16.73■□□□□ 0.27
SYNGAP1-203ENST00000428982 ADAMTSL3P82987 1691 aa16.73■□□□□ 0.27
SYNGAP1-203ENST00000428982 SLFNL1Q499Z3 407 aa16.72■□□□□ 0.27
SYNGAP1-203ENST00000428982 C16orf71Q8IYS4 520 aaPredicted RBP16.72■□□□□ 0.27
SYNGAP1-203ENST00000428982 KIF1BPQ96EK5 621 aa16.72■□□□□ 0.27
SYNGAP1-203ENST00000428982 VPS18Q9P253 973 aa16.72■□□□□ 0.27
SYNGAP1-203ENST00000428982 ATP8B2P98198 1209 aa16.72■□□□□ 0.27
SYNGAP1-203ENST00000428982 LRMPQ12912 555 aa16.72■□□□□ 0.27
SYNGAP1-203ENST00000428982 TRDNQ13061 729 aa16.72■□□□□ 0.27
SYNGAP1-203ENST00000428982 SKILP12757 684 aa16.72■□□□□ 0.27
SYNGAP1-203ENST00000428982 SSH2Q76I76 1423 aa16.71■□□□□ 0.27
SYNGAP1-203ENST00000428982 URI1O94763 535 aaPredicted RBP16.71■□□□□ 0.27
SYNGAP1-203ENST00000428982 KIAA0754O94854 1291 aa16.71■□□□□ 0.27
SYNGAP1-203ENST00000428982 MAP3K11Q16584 847 aa16.71■□□□□ 0.27
SYNGAP1-203ENST00000428982 EIF3CLB5ME19 914 aaKnown RBP16.71■□□□□ 0.26
SYNGAP1-203ENST00000428982 FAM200AQ8TCP9 573 aa16.71■□□□□ 0.26
SYNGAP1-203ENST00000428982 FMNL2Q96PY5 1086 aa16.71■□□□□ 0.26
SYNGAP1-203ENST00000428982 EIF3CQ99613 913 aaKnown RBP16.71■□□□□ 0.26
SYNGAP1-203ENST00000428982 OSBPL3Q9H4L5 887 aa16.71■□□□□ 0.26
SYNGAP1-203ENST00000428982 SH2B1Q9NRF2 756 aaPredicted RBP16.71■□□□□ 0.26
SYNGAP1-203ENST00000428982 CDR1P51861 262 aa16.7■□□□□ 0.26
SYNGAP1-203ENST00000428982 FLIIQ13045 1269 aa16.7■□□□□ 0.26
SYNGAP1-203ENST00000428982 MKRN1Q9UHC7 482 aaKnown RBP16.7■□□□□ 0.26
SYNGAP1-203ENST00000428982 RAD50Q92878 1312 aa16.7■□□□□ 0.26
SYNGAP1-203ENST00000428982 OVOS2A0A0J9YW53 1432 aa16.7■□□□□ 0.26
SYNGAP1-203ENST00000428982 OVOS2Q6IE36 1432 aa16.7■□□□□ 0.26
SYNGAP1-203ENST00000428982 ERLIN2O94905 339 aa16.7■□□□□ 0.26
SYNGAP1-203ENST00000428982 MYL6BP14649 208 aa16.7■□□□□ 0.26
SYNGAP1-203ENST00000428982 UBE2HP62256 183 aa16.7■□□□□ 0.26
SYNGAP1-203ENST00000428982 SEMA3FQ13275 785 aa16.7■□□□□ 0.26
SYNGAP1-203ENST00000428982 ANKRD1Q15327 319 aa16.7■□□□□ 0.26
SYNGAP1-203ENST00000428982 CENPHQ9H3R5 247 aa16.7■□□□□ 0.26
SYNGAP1-203ENST00000428982 CYP46A1Q9Y6A2 500 aa16.7■□□□□ 0.26
SYNGAP1-203ENST00000428982 PTCD1O75127 700 aaKnown RBP16.69■□□□□ 0.26
SYNGAP1-203ENST00000428982 SIRT2Q8IXJ6 389 aa16.69■□□□□ 0.26
SYNGAP1-203ENST00000428982 BABAM1Q9NWV8 329 aa16.69■□□□□ 0.26
SYNGAP1-203ENST00000428982 CCP110O43303 1012 aa16.69■□□□□ 0.26
SYNGAP1-203ENST00000428982 CLCN6P51797 869 aa16.69■□□□□ 0.26
SYNGAP1-203ENST00000428982 NUP62CLQ9H1M0 184 aa16.69■□□□□ 0.26
SYNGAP1-203ENST00000428982 TNMDQ9H2S6 317 aa16.69■□□□□ 0.26
SYNGAP1-203ENST00000428982 DBF4Q9UBU7 674 aaPredicted RBP16.69■□□□□ 0.26
SYNGAP1-203ENST00000428982 COL3A1P02461 1466 aaPredicted RBP16.69■□□□□ 0.26
SYNGAP1-203ENST00000428982 CD163L1Q9NR16 1453 aa16.69■□□□□ 0.26
SYNGAP1-203ENST00000428982 RNMTO43148 476 aaKnown RBP16.69■□□□□ 0.26
SYNGAP1-203ENST00000428982 TNS3Q68CZ2 1445 aa16.69■□□□□ 0.26
SYNGAP1-203ENST00000428982 DCAF5Q96JK2 942 aa16.69■□□□□ 0.26
SYNGAP1-203ENST00000428982 LRRC7Q96NW7 1537 aa16.69■□□□□ 0.26
SYNGAP1-203ENST00000428982 LIMCH1Q9UPQ0 1083 aa16.69■□□□□ 0.26
SYNGAP1-203ENST00000428982 ERLIN1O75477 346 aa16.69■□□□□ 0.26
SYNGAP1-203ENST00000428982 GLRX3O76003 335 aaKnown RBP16.69■□□□□ 0.26
SYNGAP1-203ENST00000428982 C8orf37Q96NL8 207 aa16.68■□□□□ 0.26
SYNGAP1-203ENST00000428982 EFCAB13Q8IY85 973 aa16.68■□□□□ 0.26
SYNGAP1-203ENST00000428982 EXOC4Q96A65 974 aa16.68■□□□□ 0.26
SYNGAP1-203ENST00000428982 DCCP43146 1447 aa16.68■□□□□ 0.26
SYNGAP1-203ENST00000428982 PCDH11XQ9BZA7 1347 aa16.68■□□□□ 0.26
SYNGAP1-203ENST00000428982 PCDH11YQ9BZA8 1340 aa16.68■□□□□ 0.26
SYNGAP1-203ENST00000428982 RBM6P78332 1123 aaKnown RBP16.68■□□□□ 0.26
SYNGAP1-203ENST00000428982 KIF2CQ99661 725 aa16.68■□□□□ 0.26
SYNGAP1-203ENST00000428982 SLC24A3Q9HC58 644 aa16.68■□□□□ 0.26
SYNGAP1-203ENST00000428982 LCMT1Q9UIC8 334 aa16.68■□□□□ 0.26
SYNGAP1-203ENST00000428982 VPS37CA5D8V6 355 aaPredicted RBP16.67■□□□□ 0.26
SYNGAP1-203ENST00000428982 G3BP1Q13283 466 aaKnown RBP eCLIP16.67■□□□□ 0.26
SYNGAP1-203ENST00000428982 GADD45BO75293 160 aaPredicted RBP16.67■□□□□ 0.26
SYNGAP1-203ENST00000428982 ZSCAN25Q6NSZ9 544 aa16.67■□□□□ 0.26
SYNGAP1-203ENST00000428982 KIF6Q6ZMV9 814 aa16.67■□□□□ 0.26
SYNGAP1-203ENST00000428982 F6X3S4 739 aa16.67■□□□□ 0.26
SYNGAP1-203ENST00000428982 KIF3CO14782 793 aa16.67■□□□□ 0.26
SYNGAP1-203ENST00000428982 ST5P78524 1137 aa16.66■□□□□ 0.26
SYNGAP1-203ENST00000428982 KNDC1Q76NI1 1749 aa16.66■□□□□ 0.26
SYNGAP1-203ENST00000428982 ERBB3P21860 1342 aa16.66■□□□□ 0.26
SYNGAP1-203ENST00000428982 CHMLP26374 656 aa16.66■□□□□ 0.26
SYNGAP1-203ENST00000428982 NBPF5PQ86XG9 351 aaPredicted RBP16.66■□□□□ 0.26
SYNGAP1-203ENST00000428982 ERCC4Q92889 916 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms