RNA–Protein interactions for RNA: ENST00000428494.6

GHDC-203, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 2,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-203ENST00000428494 FPGT-TNNI3KV9GXZ4 949 aa18.56■□□□□ 0.56
GHDC-203ENST00000428494 ZNF790Q6PG37 636 aa18.55■□□□□ 0.56
GHDC-203ENST00000428494 STOX1Q6ZVD7 989 aa18.55■□□□□ 0.56
GHDC-203ENST00000428494 NFATC2IPQ8NCF5 419 aa18.55■□□□□ 0.56
GHDC-203ENST00000428494 ZHX1Q9UKY1 873 aaPredicted RBP18.55■□□□□ 0.56
GHDC-203ENST00000428494 JCADQ9P266 1359 aa18.55■□□□□ 0.56
GHDC-203ENST00000428494 ZNF609O15014 1411 aa18.55■□□□□ 0.56
GHDC-203ENST00000428494 CTIFO43310 598 aaKnown RBP18.55■□□□□ 0.56
GHDC-203ENST00000428494 ATP5JP18859 108 aa18.55■□□□□ 0.56
GHDC-203ENST00000428494 C11orf57Q6ZUT1 292 aaPredicted RBP18.55■□□□□ 0.56
GHDC-203ENST00000428494 USP16Q9Y5T5 823 aa18.55■□□□□ 0.56
GHDC-203ENST00000428494 A0A0G2JLW4 131 aa18.54■□□□□ 0.56
GHDC-203ENST00000428494 ATP5J2-PTCD1G3V325 749 aa18.54■□□□□ 0.56
GHDC-203ENST00000428494 PTCD1O75127 700 aaKnown RBP18.54■□□□□ 0.56
GHDC-203ENST00000428494 UBE3BQ7Z3V4 1068 aa18.54■□□□□ 0.56
GHDC-203ENST00000428494 ERCC4Q92889 916 aaPredicted RBP18.54■□□□□ 0.56
GHDC-203ENST00000428494 ADD1P35611 737 aaKnown RBP18.54■□□□□ 0.56
GHDC-203ENST00000428494 RFX5P48382 616 aaPredicted RBP18.54■□□□□ 0.56
GHDC-203ENST00000428494 ANKRD7Q92527 254 aa18.54■□□□□ 0.56
GHDC-203ENST00000428494 TNNT1P13805 278 aa18.53■□□□□ 0.56
GHDC-203ENST00000428494 KRT32Q14532 448 aa18.53■□□□□ 0.56
GHDC-203ENST00000428494 METTL22Q9BUU2 404 aaPredicted RBP18.53■□□□□ 0.56
GHDC-203ENST00000428494 CCT2P78371 535 aaKnown RBP18.53■□□□□ 0.56
GHDC-203ENST00000428494 GOLPH3LQ9H4A5 285 aa18.53■□□□□ 0.56
GHDC-203ENST00000428494 COPRSQ9NQ92 184 aa18.53■□□□□ 0.56
GHDC-203ENST00000428494 GUCY1B3Q02153 619 aa18.52■□□□□ 0.56
GHDC-203ENST00000428494 APOBRQ0VD83 1088 aa18.52■□□□□ 0.56
GHDC-203ENST00000428494 IQCB1Q15051 598 aa18.52■□□□□ 0.56
GHDC-203ENST00000428494 ANKRD13DQ6ZTN6 518 aa18.52■□□□□ 0.56
GHDC-203ENST00000428494 FBXW7Q969H0 707 aa18.52■□□□□ 0.56
GHDC-203ENST00000428494 NCOA5Q9HCD5 579 aaKnown RBP18.52■□□□□ 0.56
GHDC-203ENST00000428494 ADGRL3Q9HAR2 1447 aa18.52■□□□□ 0.56
GHDC-203ENST00000428494 CTDNEP1O95476 244 aa18.52■□□□□ 0.55
GHDC-203ENST00000428494 MCMDC2Q4G0Z9 681 aa18.52■□□□□ 0.55
GHDC-203ENST00000428494 CCAR1Q8IX12 1150 aaKnown RBP18.52■□□□□ 0.55
GHDC-203ENST00000428494 ZNF496Q96IT1 587 aaPredicted RBP18.52■□□□□ 0.55
GHDC-203ENST00000428494 NCBP1Q09161 790 aaKnown RBP18.51■□□□□ 0.55
GHDC-203ENST00000428494 CHST3Q7LGC8 479 aa18.51■□□□□ 0.55
GHDC-203ENST00000428494 CFAP45Q9UL16 551 aa18.51■□□□□ 0.55
GHDC-203ENST00000428494 NAP1L2Q9ULW6 460 aaPredicted RBP18.51■□□□□ 0.55
GHDC-203ENST00000428494 NCAPD2Q15021 1401 aa18.51■□□□□ 0.55
GHDC-203ENST00000428494 TPD52L1Q16890 204 aaPredicted RBP18.51■□□□□ 0.55
GHDC-203ENST00000428494 ZNF592Q92610 1267 aa18.51■□□□□ 0.55
GHDC-203ENST00000428494 U3KPZ7 1027 aaPredicted RBP18.51■□□□□ 0.55
GHDC-203ENST00000428494 USP27XA6NNY8 438 aa18.5■□□□□ 0.55
GHDC-203ENST00000428494 ZC3H6P61129 1189 aaKnown RBP18.5■□□□□ 0.55
GHDC-203ENST00000428494 NSUN7Q8NE18 718 aaKnown RBP18.5■□□□□ 0.55
GHDC-203ENST00000428494 USP28Q96RU2 1077 aa18.5■□□□□ 0.55
GHDC-203ENST00000428494 ZSCAN16Q9H4T2 348 aaPredicted RBP18.5■□□□□ 0.55
GHDC-203ENST00000428494 GOLGA6L19H0YKK7 550 aa18.5■□□□□ 0.55
GHDC-203ENST00000428494 DMTNQ08495 405 aa18.5■□□□□ 0.55
GHDC-203ENST00000428494 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.5■□□□□ 0.55
GHDC-203ENST00000428494 SNW1Q13573 536 aaKnown RBP18.49■□□□□ 0.55
GHDC-203ENST00000428494 SMARCC2Q8TAQ2 1214 aa18.49■□□□□ 0.55
GHDC-203ENST00000428494 NEUROD6Q96NK8 337 aa18.49■□□□□ 0.55
GHDC-203ENST00000428494 HAUS7Q99871 368 aa18.49■□□□□ 0.55
GHDC-203ENST00000428494 SLC52A2Q9HAB3 445 aa18.49■□□□□ 0.55
GHDC-203ENST00000428494 A0A087WZG4 1122 aa18.48■□□□□ 0.55
GHDC-203ENST00000428494 PTPDC1A2A3K4 754 aa18.48■□□□□ 0.55
GHDC-203ENST00000428494 GOLIM4O00461 696 aa18.48■□□□□ 0.55
GHDC-203ENST00000428494 PFKFB2O60825 505 aa18.48■□□□□ 0.55
GHDC-203ENST00000428494 IGSF3O75054 1194 aa18.48■□□□□ 0.55
GHDC-203ENST00000428494 LRRC8AQ8IWT6 810 aa18.48■□□□□ 0.55
GHDC-203ENST00000428494 RCOR1Q9UKL0 485 aa18.48■□□□□ 0.55
GHDC-203ENST00000428494 TIMM10P62072 90 aa18.48■□□□□ 0.55
GHDC-203ENST00000428494 LRP10Q7Z4F1 713 aa18.48■□□□□ 0.55
GHDC-203ENST00000428494 SMTNL1A8MU46 457 aa18.47■□□□□ 0.55
GHDC-203ENST00000428494 DHX32Q7L7V1 743 aaKnown RBP18.47■□□□□ 0.55
GHDC-203ENST00000428494 FILIP1Q7Z7B0 1213 aa18.47■□□□□ 0.55
GHDC-203ENST00000428494 LMBR1LQ6UX01 489 aa18.47■□□□□ 0.55
GHDC-203ENST00000428494 MRC1P22897 1456 aa18.46■□□□□ 0.55
GHDC-203ENST00000428494 KBTBD3Q8NAB2 608 aa18.46■□□□□ 0.55
GHDC-203ENST00000428494 NLRP2Q9NX02 1062 aa18.46■□□□□ 0.55
GHDC-203ENST00000428494 OVOS2A0A0G2JMS6 1433 aa18.46■□□□□ 0.55
GHDC-203ENST00000428494 ME1P48163 572 aa18.46■□□□□ 0.55
GHDC-203ENST00000428494 AEBP2Q6ZN18 517 aaPredicted RBP18.46■□□□□ 0.55
GHDC-203ENST00000428494 ILDR1Q86SU0 546 aaPredicted RBP18.46■□□□□ 0.55
GHDC-203ENST00000428494 DHX40Q8IX18 779 aaKnown RBP18.46■□□□□ 0.55
GHDC-203ENST00000428494 SIPA1L3O60292 1781 aaPredicted RBP18.45■□□□□ 0.54
GHDC-203ENST00000428494 BECN2A8MW95 431 aa18.45■□□□□ 0.54
GHDC-203ENST00000428494 CCDC112Q8NEF3 446 aa18.45■□□□□ 0.54
GHDC-203ENST00000428494 GPHNQ9NQX3 736 aaPredicted RBP18.45■□□□□ 0.54
GHDC-203ENST00000428494 TRMT1Q9NXH9 659 aaKnown RBP18.45■□□□□ 0.54
GHDC-203ENST00000428494 C5P01031 1676 aa18.45■□□□□ 0.54
GHDC-203ENST00000428494 STX1AQ16623 288 aa18.45■□□□□ 0.54
GHDC-203ENST00000428494 RABL6Q3YEC7 729 aaPredicted RBP18.45■□□□□ 0.54
GHDC-203ENST00000428494 OTUD7BQ6GQQ9 843 aa18.45■□□□□ 0.54
GHDC-203ENST00000428494 ENGASEQ8NFI3 743 aa18.45■□□□□ 0.54
GHDC-203ENST00000428494 RAPGEF4Q8WZA2 1011 aa18.45■□□□□ 0.54
GHDC-203ENST00000428494 KDM6AO15550 1401 aaPredicted RBP18.44■□□□□ 0.54
GHDC-203ENST00000428494 SKILP12757 684 aa18.44■□□□□ 0.54
GHDC-203ENST00000428494 EXOSC10Q01780 885 aaKnown RBP18.44■□□□□ 0.54
GHDC-203ENST00000428494 CEP135Q66GS9 1140 aa18.44■□□□□ 0.54
GHDC-203ENST00000428494 TTLL5Q6EMB2 1281 aa18.44■□□□□ 0.54
GHDC-203ENST00000428494 NAA16Q6N069 864 aaPredicted RBP18.44■□□□□ 0.54
GHDC-203ENST00000428494 CCDC73Q6ZRK6 1079 aa18.44■□□□□ 0.54
GHDC-203ENST00000428494 FSIP1Q8NA03 581 aa18.44■□□□□ 0.54
GHDC-203ENST00000428494 LLPHQ9BRT6 129 aaKnown RBP18.44■□□□□ 0.54
GHDC-203ENST00000428494 KINO60870 393 aaKnown RBP18.44■□□□□ 0.54
GHDC-203ENST00000428494 CDC25BP30305 580 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms