RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 RANBP2P49792 3224 aaKnown RBP15.89■□□□□ 0.13
DDX39B-208ENST00000428098 C6orf229H3BNL8 230 aa15.89■□□□□ 0.13
DDX39B-208ENST00000428098 LRP10Q7Z4F1 713 aa15.89■□□□□ 0.13
DDX39B-208ENST00000428098 THUMPD2Q9BTF0 503 aaKnown RBP15.89■□□□□ 0.13
DDX39B-208ENST00000428098 LAMB2P55268 1798 aa15.88■□□□□ 0.13
DDX39B-208ENST00000428098 EIF4A1P60842 406 aaKnown RBP15.88■□□□□ 0.13
DDX39B-208ENST00000428098 COL6A3P12111 3177 aa15.87■□□□□ 0.13
DDX39B-208ENST00000428098 CAP1Q01518 475 aa15.87■□□□□ 0.13
DDX39B-208ENST00000428098 PTPN12Q05209 780 aaKnown RBP15.87■□□□□ 0.13
DDX39B-208ENST00000428098 CNGB1Q14028 1251 aaPredicted RBP15.87■□□□□ 0.13
DDX39B-208ENST00000428098 CELF1Q92879 486 aaKnown RBP15.87■□□□□ 0.13
DDX39B-208ENST00000428098 ZNF428Q96B54 188 aa15.87■□□□□ 0.13
DDX39B-208ENST00000428098 ARMC5Q96C12 935 aa15.87■□□□□ 0.13
DDX39B-208ENST00000428098 PTPN22Q9Y2R2 807 aa15.87■□□□□ 0.13
DDX39B-208ENST00000428098 SCN9AQ15858 1988 aa15.87■□□□□ 0.13
DDX39B-208ENST00000428098 ANKRD36CQ5JPF3 1778 aa15.86■□□□□ 0.13
DDX39B-208ENST00000428098 HTATSF1O43719 755 aaKnown RBP15.86■□□□□ 0.13
DDX39B-208ENST00000428098 PDIA6Q15084 440 aa15.86■□□□□ 0.13
DDX39B-208ENST00000428098 TMC4Q7Z404 712 aa15.86■□□□□ 0.13
DDX39B-208ENST00000428098 NLRP10Q86W26 655 aa15.86■□□□□ 0.13
DDX39B-208ENST00000428098 TBC1D16Q8TBP0 767 aa15.86■□□□□ 0.13
DDX39B-208ENST00000428098 GMLQ99445 158 aa15.86■□□□□ 0.13
DDX39B-208ENST00000428098 SREBF2Q12772 1141 aa15.85■□□□□ 0.13
DDX39B-208ENST00000428098 TTLL12Q14166 644 aaPredicted RBP15.85■□□□□ 0.13
DDX39B-208ENST00000428098 COL4A1P02462 1669 aa15.85■□□□□ 0.13
DDX39B-208ENST00000428098 LAMB4A4D0S4 1761 aa15.85■□□□□ 0.13
DDX39B-208ENST00000428098 ANXA1P04083 346 aa15.84■□□□□ 0.13
DDX39B-208ENST00000428098 PROSER3Q2NL68 480 aa15.84■□□□□ 0.13
DDX39B-208ENST00000428098 SPRYD7Q5W111 196 aa15.84■□□□□ 0.13
DDX39B-208ENST00000428098 MYOZ2Q9NPC6 264 aa15.84■□□□□ 0.13
DDX39B-208ENST00000428098 TRMT112Q9UI30 125 aaKnown RBP15.84■□□□□ 0.13
DDX39B-208ENST00000428098 TIMELESSQ9UNS1 1208 aa15.84■□□□□ 0.13
DDX39B-208ENST00000428098 PITPNM2Q9BZ72 1349 aa15.84■□□□□ 0.13
DDX39B-208ENST00000428098 RBBP6Q7Z6E9 1792 aaKnown RBP15.84■□□□□ 0.13
DDX39B-208ENST00000428098 LRRC37AA6NMS7 1700 aa15.83■□□□□ 0.13
DDX39B-208ENST00000428098 NBPF9Q3BBW0 867 aa15.83■□□□□ 0.12
DDX39B-208ENST00000428098 RSBN1LQ6PCB5 846 aaPredicted RBP15.83■□□□□ 0.12
DDX39B-208ENST00000428098 CHRDL2Q6WN34 429 aa15.83■□□□□ 0.12
DDX39B-208ENST00000428098 AGBL3Q8NEM8 1001 aa15.83■□□□□ 0.12
DDX39B-208ENST00000428098 RBM27Q9P2N5 1060 aaKnown RBP15.83■□□□□ 0.12
DDX39B-208ENST00000428098 USP17L8P0C7I0 530 aa15.82■□□□□ 0.12
DDX39B-208ENST00000428098 PRKG1Q13976 671 aa15.82■□□□□ 0.12
DDX39B-208ENST00000428098 LDLRAD1Q5T700 205 aa15.82■□□□□ 0.12
DDX39B-208ENST00000428098 IFNL1Q8IU54 200 aa15.82■□□□□ 0.12
DDX39B-208ENST00000428098 CD99L2Q8TCZ2 262 aa15.82■□□□□ 0.12
DDX39B-208ENST00000428098 EYA3Q99504 573 aa15.82■□□□□ 0.12
DDX39B-208ENST00000428098 ZC3H12CQ9C0D7 883 aaKnown RBP15.82■□□□□ 0.12
DDX39B-208ENST00000428098 SH3TC1Q8TE82 1336 aa15.82■□□□□ 0.12
DDX39B-208ENST00000428098 IGF2BP3O00425 579 aaKnown RBP eCLIP15.81■□□□□ 0.12
DDX39B-208ENST00000428098 ALDH1A1P00352 501 aa15.81■□□□□ 0.12
DDX39B-208ENST00000428098 FZD1Q9UP38 647 aa15.81■□□□□ 0.12
DDX39B-208ENST00000428098 U2AF1L5P0DN76 240 aaPredicted RBP15.8■□□□□ 0.12
DDX39B-208ENST00000428098 U2AF1Q01081 240 aaKnown RBP eCLIP15.8■□□□□ 0.124e-14■□□□□ 8.9
DDX39B-208ENST00000428098 TCIRG1Q13488 830 aa15.8■□□□□ 0.12
DDX39B-208ENST00000428098 SF3B3Q15393 1217 aaKnown RBP15.8■□□□□ 0.12
DDX39B-208ENST00000428098 PNISRQ8TF01 805 aaKnown RBP15.8■□□□□ 0.12
DDX39B-208ENST00000428098 ZNF333Q96JL9 665 aa15.8■□□□□ 0.12
DDX39B-208ENST00000428098 TMEM106CQ9BVX2 250 aa15.8■□□□□ 0.12
DDX39B-208ENST00000428098 ERBB4Q15303 1308 aa15.79■□□□□ 0.12
DDX39B-208ENST00000428098 COPS6Q7L5N1 327 aa15.79■□□□□ 0.12
DDX39B-208ENST00000428098 EFCC1Q9HA90 598 aa15.79■□□□□ 0.12
DDX39B-208ENST00000428098 EIF2S2P20042 333 aaKnown RBP15.78■□□□□ 0.12
DDX39B-208ENST00000428098 RPS8P62241 208 aaKnown RBP15.78■□□□□ 0.12
DDX39B-208ENST00000428098 NECTIN2Q92692 538 aa15.78■□□□□ 0.12
DDX39B-208ENST00000428098 ERO1AQ96HE7 468 aa15.78■□□□□ 0.12
DDX39B-208ENST00000428098 ZNF609O15014 1411 aa15.77■□□□□ 0.12
DDX39B-208ENST00000428098 KDM3BQ7LBC6 1761 aa15.77■□□□□ 0.12
DDX39B-208ENST00000428098 WTIPA6NIX2 430 aaPredicted RBP15.77■□□□□ 0.12
DDX39B-208ENST00000428098 INHBEP58166 350 aa15.77■□□□□ 0.12
DDX39B-208ENST00000428098 AIMP1Q12904 312 aaKnown RBP15.77■□□□□ 0.12
DDX39B-208ENST00000428098 FAM89AQ96GI7 184 aa15.77■□□□□ 0.12
DDX39B-208ENST00000428098 MXD3Q9BW11 206 aa15.77■□□□□ 0.12
DDX39B-208ENST00000428098 PODXL2Q9NZ53 605 aa15.77■□□□□ 0.12
DDX39B-208ENST00000428098 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.77■□□□□ 0.12
DDX39B-208ENST00000428098 MANSC4A6NHS7 340 aaPredicted RBP15.76■□□□□ 0.11
DDX39B-208ENST00000428098 G3V3G9 751 aa15.76■□□□□ 0.11
DDX39B-208ENST00000428098 WNT10BO00744 389 aa15.76■□□□□ 0.11
DDX39B-208ENST00000428098 UFL1O94874 794 aa15.76■□□□□ 0.11
DDX39B-208ENST00000428098 CRHR2Q13324 411 aa15.76■□□□□ 0.11
DDX39B-208ENST00000428098 HSP90AB3PQ58FF7 597 aa15.76■□□□□ 0.11
DDX39B-208ENST00000428098 DCAF8Q5TAQ9 597 aa15.76■□□□□ 0.11
DDX39B-208ENST00000428098 ARMC9Q7Z3E5 817 aa15.76■□□□□ 0.11
DDX39B-208ENST00000428098 XAGE3Q8WTP9 111 aa15.76■□□□□ 0.11
DDX39B-208ENST00000428098 PRO3102Q9H379 93 aa15.76■□□□□ 0.11
DDX39B-208ENST00000428098 ANGEL1Q9UNK9 670 aaKnown RBP15.76■□□□□ 0.11
DDX39B-208ENST00000428098 MYCP01106 439 aaPredicted RBP15.75■□□□□ 0.11
DDX39B-208ENST00000428098 NF2P35240 595 aa15.75■□□□□ 0.11
DDX39B-208ENST00000428098 SLC10A4Q96EP9 437 aa15.75■□□□□ 0.11
DDX39B-208ENST00000428098 CLMNQ96JQ2 1002 aa15.75■□□□□ 0.11
DDX39B-208ENST00000428098 PTPN18Q99952 460 aa15.75■□□□□ 0.11
DDX39B-208ENST00000428098 NUDCQ9Y266 331 aa15.75■□□□□ 0.11
DDX39B-208ENST00000428098 SP3Q02447 781 aa15.74■□□□□ 0.11
DDX39B-208ENST00000428098 SLC4A8Q2Y0W8 1093 aa15.74■□□□□ 0.11
DDX39B-208ENST00000428098 SEC31BQ9NQW1 1179 aa15.74■□□□□ 0.11
DDX39B-208ENST00000428098 PTCH2Q9Y6C5 1203 aa15.74■□□□□ 0.11
DDX39B-208ENST00000428098 DDX60Q8IY21 1712 aaKnown RBP15.74■□□□□ 0.11
DDX39B-208ENST00000428098 USP17L3A6NCW0 530 aa15.73■□□□□ 0.11
DDX39B-208ENST00000428098 USP17L4A6NCW7 530 aa15.73■□□□□ 0.11
DDX39B-208ENST00000428098 RTL5Q5HYW3 569 aaPredicted RBP15.73■□□□□ 0.11
DDX39B-208ENST00000428098 USP17L1Q7RTZ2 530 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms