RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 CCER2I3L3R5 266 aa19.29■□□□□ 0.68
PHF1-204ENST00000427826 UFL1O94874 794 aa19.29■□□□□ 0.68
PHF1-204ENST00000427826 DCAF8Q5TAQ9 597 aa19.29■□□□□ 0.68
PHF1-204ENST00000427826 GREM2Q9H772 168 aa19.29■□□□□ 0.68
PHF1-204ENST00000427826 BSDC1Q9NW68 430 aaPredicted RBP19.29■□□□□ 0.68
PHF1-204ENST00000427826 CACNA1FO60840 1977 aa19.29■□□□□ 0.68
PHF1-204ENST00000427826 TMEM88BA6NKF7 163 aa19.28■□□□□ 0.68
PHF1-204ENST00000427826 ECE2O60344 883 aa19.28■□□□□ 0.68
PHF1-204ENST00000427826 DBNDD1Q9H9R9 158 aa19.28■□□□□ 0.68
PHF1-204ENST00000427826 H7C1D1 291 aa19.27■□□□□ 0.68
PHF1-204ENST00000427826 ATP2B4P23634 1241 aa19.27■□□□□ 0.68
PHF1-204ENST00000427826 IGHMBP2P38935 993 aaKnown RBP19.27■□□□□ 0.68
PHF1-204ENST00000427826 CASP7P55210 303 aa19.27■□□□□ 0.68
PHF1-204ENST00000427826 BEND3Q5T5X7 828 aa19.27■□□□□ 0.68
PHF1-204ENST00000427826 DPF2Q92785 391 aa19.27■□□□□ 0.68
PHF1-204ENST00000427826 ADAMTSL1Q8N6G6 1762 aa19.27■□□□□ 0.67
PHF1-204ENST00000427826 F6X3S4 739 aa19.26■□□□□ 0.67
PHF1-204ENST00000427826 CSF1RP07333 972 aa19.26■□□□□ 0.67
PHF1-204ENST00000427826 RPS12P25398 132 aaKnown RBP19.26■□□□□ 0.67
PHF1-204ENST00000427826 DOK7Q18PE1 504 aa19.26■□□□□ 0.67
PHF1-204ENST00000427826 CNOT7Q9UIV1 285 aaKnown RBP19.26■□□□□ 0.67
PHF1-204ENST00000427826 COL4A1P02462 1669 aa19.26■□□□□ 0.67
PHF1-204ENST00000427826 PSMD14O00487 310 aa19.25■□□□□ 0.67
PHF1-204ENST00000427826 ZC3H15Q8WU90 426 aaKnown RBP19.25■□□□□ 0.67
PHF1-204ENST00000427826 MINPP1Q9UNW1 487 aa19.25■□□□□ 0.67
PHF1-204ENST00000427826 LTBP1Q14766 1721 aa19.25■□□□□ 0.67
PHF1-204ENST00000427826 ITGA6P23229 1130 aa19.24■□□□□ 0.67
PHF1-204ENST00000427826 GPR101Q96P66 508 aaPredicted RBP19.24■□□□□ 0.67
PHF1-204ENST00000427826 MPHOSPH8Q99549 860 aa19.24■□□□□ 0.67
PHF1-204ENST00000427826 ALDH1L1O75891 902 aa19.23■□□□□ 0.67
PHF1-204ENST00000427826 SLFN5Q08AF3 891 aa19.23■□□□□ 0.67
PHF1-204ENST00000427826 MICALL2Q8IY33 904 aa19.23■□□□□ 0.67
PHF1-204ENST00000427826 ANKRD2Q9GZV1 360 aa19.23■□□□□ 0.67
PHF1-204ENST00000427826 ANKRD18BA2A2Z9 1011 aa19.22■□□□□ 0.67
PHF1-204ENST00000427826 VIL1P09327 827 aaKnown RBP19.22■□□□□ 0.67
PHF1-204ENST00000427826 FAM161AQ3B820 660 aa19.22■□□□□ 0.67
PHF1-204ENST00000427826 SLC4A10Q6U841 1118 aa19.22■□□□□ 0.67
PHF1-204ENST00000427826 PODNQ7Z5L7 613 aa19.22■□□□□ 0.67
PHF1-204ENST00000427826 SRCIN1Q9C0H9 1055 aa19.22■□□□□ 0.67
PHF1-204ENST00000427826 C9orf78Q9NZ63 289 aaPredicted RBP19.22■□□□□ 0.67
PHF1-204ENST00000427826 MKRN1Q9UHC7 482 aaKnown RBP19.22■□□□□ 0.67
PHF1-204ENST00000427826 PGAP2Q9UHJ9 254 aa19.22■□□□□ 0.67
PHF1-204ENST00000427826 LEMD3Q9Y2U8 911 aa19.22■□□□□ 0.67
PHF1-204ENST00000427826 ZBTB12Q9Y330 459 aaPredicted RBP19.22■□□□□ 0.67
PHF1-204ENST00000427826 CNTNAP1P78357 1384 aa19.21■□□□□ 0.67
PHF1-204ENST00000427826 GRM8O00222 908 aa19.21■□□□□ 0.67
PHF1-204ENST00000427826 CCT4P50991 539 aaKnown RBP19.21■□□□□ 0.67
PHF1-204ENST00000427826 IFIT5Q13325 482 aaKnown RBP19.21■□□□□ 0.67
PHF1-204ENST00000427826 KCNQ5Q9NR82 932 aa19.21■□□□□ 0.67
PHF1-204ENST00000427826 MRPL50Q8N5N7 158 aaKnown RBP19.2■□□□□ 0.66
PHF1-204ENST00000427826 PTPRCP08575 1304 aa19.2■□□□□ 0.66
PHF1-204ENST00000427826 MYH3P11055 1940 aa19.19■□□□□ 0.66
PHF1-204ENST00000427826 MED23Q9ULK4 1368 aa19.19■□□□□ 0.66
PHF1-204ENST00000427826 HIRAP54198 1017 aaPredicted RBP19.19■□□□□ 0.66
PHF1-204ENST00000427826 FOXO4P98177 505 aa19.19■□□□□ 0.66
PHF1-204ENST00000427826 AGBL3Q8NEM8 1001 aa19.19■□□□□ 0.66
PHF1-204ENST00000427826 TRPM4Q8TD43 1214 aa19.19■□□□□ 0.66
PHF1-204ENST00000427826 ABT1Q9ULW3 272 aaKnown RBP19.19■□□□□ 0.66
PHF1-204ENST00000427826 CHMP3Q9Y3E7 222 aa19.19■□□□□ 0.66
PHF1-204ENST00000427826 CCDC57Q2TAC2 916 aa19.18■□□□□ 0.66
PHF1-204ENST00000427826 DEFB115Q30KQ5 88 aa19.18■□□□□ 0.66
PHF1-204ENST00000427826 CDC37L1Q7L3B6 337 aa19.18■□□□□ 0.66
PHF1-204ENST00000427826 USP17L3A6NCW0 530 aa19.17■□□□□ 0.66
PHF1-204ENST00000427826 USP17L4A6NCW7 530 aa19.17■□□□□ 0.66
PHF1-204ENST00000427826 RASSF10A6NK89 507 aa19.17■□□□□ 0.66
PHF1-204ENST00000427826 ALDH1L2Q3SY69 923 aa19.17■□□□□ 0.66
PHF1-204ENST00000427826 RSBN1LQ6PCB5 846 aaPredicted RBP19.17■□□□□ 0.66
PHF1-204ENST00000427826 LMBR1LQ6UX01 489 aa19.17■□□□□ 0.66
PHF1-204ENST00000427826 USP17L1Q7RTZ2 530 aa19.17■□□□□ 0.66
PHF1-204ENST00000427826 SSH1Q8WYL5 1049 aa19.17■□□□□ 0.66
PHF1-204ENST00000427826 COA1Q9GZY4 146 aa19.17■□□□□ 0.66
PHF1-204ENST00000427826 ZNF804BA4D1E1 1349 aa19.17■□□□□ 0.66
PHF1-204ENST00000427826 PCNTO95613 3336 aa19.17■□□□□ 0.66
PHF1-204ENST00000427826 SHTN1A0MZ66 631 aa19.16■□□□□ 0.66
PHF1-204ENST00000427826 TRAF5O00463 557 aa19.16■□□□□ 0.66
PHF1-204ENST00000427826 CT47B1P0C2W7 299 aaPredicted RBP19.16■□□□□ 0.66
PHF1-204ENST00000427826 KCNJ4P48050 445 aa19.16■□□□□ 0.66
PHF1-204ENST00000427826 TBC1D10BQ4KMP7 808 aaPredicted RBP19.16■□□□□ 0.66
PHF1-204ENST00000427826 TAF7LQ5H9L4 462 aa19.16■□□□□ 0.66
PHF1-204ENST00000427826 SAMD7Q7Z3H4 446 aa19.16■□□□□ 0.66
PHF1-204ENST00000427826 TRMT2AQ8IZ69 625 aaKnown RBP19.16■□□□□ 0.66
PHF1-204ENST00000427826 WTIPA6NIX2 430 aaPredicted RBP19.15■□□□□ 0.66
PHF1-204ENST00000427826 VEGFBP49765 207 aa19.15■□□□□ 0.66
PHF1-204ENST00000427826 CHRNDQ07001 517 aa19.15■□□□□ 0.66
PHF1-204ENST00000427826 CST9Q5W186 159 aa19.15■□□□□ 0.66
PHF1-204ENST00000427826 CDCA7LQ96GN5 454 aa19.15■□□□□ 0.66
PHF1-204ENST00000427826 GLIS2Q9BZE0 524 aaPredicted RBP19.15■□□□□ 0.66
PHF1-204ENST00000427826 ZNF609O15014 1411 aa19.15■□□□□ 0.66
PHF1-204ENST00000427826 HSPA1AP0DMV8 641 aaKnown RBP19.14■□□□□ 0.65
PHF1-204ENST00000427826 HSPA1BP0DMV9 641 aaKnown RBP19.14■□□□□ 0.65
PHF1-204ENST00000427826 RBM26Q5T8P6 1007 aaKnown RBP19.14■□□□□ 0.65
PHF1-204ENST00000427826 CELF2O95319 508 aaKnown RBP19.13■□□□□ 0.65
PHF1-204ENST00000427826 USP17L8P0C7I0 530 aa19.13■□□□□ 0.65
PHF1-204ENST00000427826 ZNF280AP59817 542 aaPredicted RBP19.13■□□□□ 0.65
PHF1-204ENST00000427826 FMR1Q06787 632 aaKnown RBP eCLIP19.13■□□□□ 0.65
PHF1-204ENST00000427826 KIF4BQ2VIQ3 1234 aa19.13■□□□□ 0.65
PHF1-204ENST00000427826 EPHA10Q5JZY3 1008 aa19.13■□□□□ 0.65
PHF1-204ENST00000427826 STRIP1Q5VSL9 837 aa19.13■□□□□ 0.65
PHF1-204ENST00000427826 LDHAL6AQ6ZMR3 332 aa19.13■□□□□ 0.65
PHF1-204ENST00000427826 DCPSQ96C86 337 aaKnown RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms