RNA–Protein interactions for RNA: ENST00000427538.5

VSIG4-203, Transcript of V-set and immunoglobulin domain containing 4, humanhuman

TSL 3

Gene VSIG4, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4-203ENST00000427538 JARID2Q92833 1246 aaPredicted RBP11.12□□□□□ -0.63
VSIG4-203ENST00000427538 ZSWIM6Q9HCJ5 1215 aa11.12□□□□□ -0.63
VSIG4-203ENST00000427538 ABCC12Q96J65 1359 aa11.12□□□□□ -0.63
VSIG4-203ENST00000427538 KIF3CO14782 793 aa11.11□□□□□ -0.63
VSIG4-203ENST00000427538 PDE8AO60658 829 aa11.11□□□□□ -0.63
VSIG4-203ENST00000427538 CCDC152Q4G0S7 254 aa11.11□□□□□ -0.63
VSIG4-203ENST00000427538 SOGA3Q5TF21 947 aa11.11□□□□□ -0.63
VSIG4-203ENST00000427538 SYNE4Q8N205 404 aa11.11□□□□□ -0.63
VSIG4-203ENST00000427538 ARHGAP45Q92619 1136 aa11.11□□□□□ -0.63
VSIG4-203ENST00000427538 RCAN3Q9UKA8 241 aa11.11□□□□□ -0.63
VSIG4-203ENST00000427538 HDAC5Q9UQL6 1122 aa11.11□□□□□ -0.63
VSIG4-203ENST00000427538 CHMP3Q9Y3E7 222 aa11.11□□□□□ -0.63
VSIG4-203ENST00000427538 COL24A1Q17RW2 1714 aa11.1□□□□□ -0.63
VSIG4-203ENST00000427538 C2orf72A6NCS6 295 aa11.1□□□□□ -0.63
VSIG4-203ENST00000427538 GRM8O00222 908 aa11.1□□□□□ -0.63
VSIG4-203ENST00000427538 C21orf2O43822 256 aa11.1□□□□□ -0.63
VSIG4-203ENST00000427538 MS4A1P11836 297 aa11.1□□□□□ -0.63
VSIG4-203ENST00000427538 KCNA3P22001 575 aa11.1□□□□□ -0.63
VSIG4-203ENST00000427538 BRPF1P55201 1214 aaPredicted RBP11.1□□□□□ -0.63
VSIG4-203ENST00000427538 PRPF40BQ6NWY9 871 aaKnown RBP11.1□□□□□ -0.63
VSIG4-203ENST00000427538 ATF7IPQ6VMQ6 1270 aa11.1□□□□□ -0.63
VSIG4-203ENST00000427538 CLUAP1Q96AJ1 413 aa11.1□□□□□ -0.63
VSIG4-203ENST00000427538 CCDC85AQ96PX6 553 aaPredicted RBP11.1□□□□□ -0.63
VSIG4-203ENST00000427538 KLRG2A4D1S0 409 aaPredicted RBP11.09□□□□□ -0.63
VSIG4-203ENST00000427538 FAM205CA6NFA0 338 aa11.09□□□□□ -0.63
VSIG4-203ENST00000427538 YBX3P16989 372 aaKnown RBP eCLIP11.09□□□□□ -0.63
VSIG4-203ENST00000427538 CRY2Q49AN0 593 aa11.09□□□□□ -0.63
VSIG4-203ENST00000427538 TAF7LQ5H9L4 462 aa11.09□□□□□ -0.63
VSIG4-203ENST00000427538 CRAMP1Q96RY5 1269 aa11.09□□□□□ -0.63
VSIG4-203ENST00000427538 NUP98P52948 1817 aa11.09□□□□□ -0.63
VSIG4-203ENST00000427538 CDHR2Q9BYE9 1310 aa11.09□□□□□ -0.63
VSIG4-203ENST00000427538 H7C1W4 665 aa11.08□□□□□ -0.64
VSIG4-203ENST00000427538 PPEF1O14829 653 aaPredicted RBP11.08□□□□□ -0.64
VSIG4-203ENST00000427538 CTSWP56202 376 aa11.08□□□□□ -0.64
VSIG4-203ENST00000427538 SF3B3Q15393 1217 aaKnown RBP11.08□□□□□ -0.64
VSIG4-203ENST00000427538 TMC2Q8TDI7 906 aa11.08□□□□□ -0.64
VSIG4-203ENST00000427538 HS3ST6Q96QI5 342 aa11.08□□□□□ -0.64
VSIG4-203ENST00000427538 CDC5LQ99459 802 aaKnown RBP11.08□□□□□ -0.64
VSIG4-203ENST00000427538 RYDENQ9NUL5 291 aaKnown RBP11.08□□□□□ -0.64
VSIG4-203ENST00000427538 RIC1Q4ADV7 1423 aa11.08□□□□□ -0.64
VSIG4-203ENST00000427538 BBOX1O75936 387 aa11.07□□□□□ -0.64
VSIG4-203ENST00000427538 UBTFL1P0CB47 393 aaPredicted RBP11.07□□□□□ -0.64
VSIG4-203ENST00000427538 TRIM27P14373 513 aa11.07□□□□□ -0.64
VSIG4-203ENST00000427538 HOXA10P31260 410 aaPredicted RBP11.07□□□□□ -0.64
VSIG4-203ENST00000427538 GRAPQ13588 217 aa11.07□□□□□ -0.64
VSIG4-203ENST00000427538 CCDC93Q567U6 631 aa11.07□□□□□ -0.64
VSIG4-203ENST00000427538 ANKRD18AQ8IVF6 992 aa11.07□□□□□ -0.64
VSIG4-203ENST00000427538 DZIP1LQ8IYY4 767 aaKnown RBP11.07□□□□□ -0.64
VSIG4-203ENST00000427538 RTKN2Q8IZC4 609 aa11.07□□□□□ -0.64
VSIG4-203ENST00000427538 GRAPLQ8TC17 118 aaPredicted RBP11.07□□□□□ -0.64
VSIG4-203ENST00000427538 ARFGEF2Q9Y6D5 1785 aa11.07□□□□□ -0.64
VSIG4-203ENST00000427538 NRXN2Q9P2S2 1712 aa11.06□□□□□ -0.64
VSIG4-203ENST00000427538 GNAI3P08754 354 aa11.06□□□□□ -0.64
VSIG4-203ENST00000427538 IGHMBP2P38935 993 aaKnown RBP11.06□□□□□ -0.64
VSIG4-203ENST00000427538 IFIT5Q13325 482 aaKnown RBP11.06□□□□□ -0.64
VSIG4-203ENST00000427538 CCDC57Q2TAC2 916 aa11.06□□□□□ -0.64
VSIG4-203ENST00000427538 GRIPAP1Q4V328 841 aa11.06□□□□□ -0.64
VSIG4-203ENST00000427538 CC2D2BQ6DHV5 1058 aa11.06□□□□□ -0.64
VSIG4-203ENST00000427538 TMC4Q7Z404 712 aa11.06□□□□□ -0.64
VSIG4-203ENST00000427538 ITPRIPQ8IWB1 547 aa11.06□□□□□ -0.64
VSIG4-203ENST00000427538 MPHOSPH8Q99549 860 aa11.06□□□□□ -0.64
VSIG4-203ENST00000427538 AFDNP55196 1824 aaKnown RBP11.06□□□□□ -0.64
VSIG4-203ENST00000427538 ABCC4O15439 1325 aa11.06□□□□□ -0.64
VSIG4-203ENST00000427538 POTEB3A0JP26 581 aa11.05□□□□□ -0.64
VSIG4-203ENST00000427538 ANKRD18BA2A2Z9 1011 aa11.05□□□□□ -0.64
VSIG4-203ENST00000427538 RPS8P62241 208 aaKnown RBP11.05□□□□□ -0.64
VSIG4-203ENST00000427538 GPR153Q6NV75 609 aa11.05□□□□□ -0.64
VSIG4-203ENST00000427538 POTEBQ6S5H4 581 aa11.05□□□□□ -0.64
VSIG4-203ENST00000427538 TAOK3Q9H2K8 898 aa11.05□□□□□ -0.64
VSIG4-203ENST00000427538 ANKRD36CQ5JPF3 1778 aa11.04□□□□□ -0.64
VSIG4-203ENST00000427538 N4BP2Q86UW6 1770 aaPredicted RBP11.04□□□□□ -0.64
VSIG4-203ENST00000427538 NBPF7P0C2Y1 421 aaPredicted RBP11.04□□□□□ -0.64
VSIG4-203ENST00000427538 ITGA6P23229 1130 aa11.04□□□□□ -0.64
VSIG4-203ENST00000427538 INTS3Q68E01 1043 aaKnown RBP11.04□□□□□ -0.64
VSIG4-203ENST00000427538 LMBR1LQ6UX01 489 aa11.04□□□□□ -0.64
VSIG4-203ENST00000427538 DPP8Q6V1X1 898 aaPredicted RBP11.04□□□□□ -0.64
VSIG4-203ENST00000427538 TTLL11Q8NHH1 800 aa11.04□□□□□ -0.64
VSIG4-203ENST00000427538 PLA2G12BQ9BX93 195 aa11.04□□□□□ -0.64
VSIG4-203ENST00000427538 CHMP4BQ9H444 224 aaKnown RBP11.04□□□□□ -0.64
VSIG4-203ENST00000427538 GREM2Q9H772 168 aa11.04□□□□□ -0.64
VSIG4-203ENST00000427538 ANKIB1Q9P2G1 1089 aa11.04□□□□□ -0.64
VSIG4-203ENST00000427538 YY1P25490 414 aa11.03□□□□□ -0.64
VSIG4-203ENST00000427538 FAM161AQ3B820 660 aa11.03□□□□□ -0.64
VSIG4-203ENST00000427538 SP8Q8IXZ3 490 aa11.03□□□□□ -0.64
VSIG4-203ENST00000427538 MPNDQ8N594 471 aa11.03□□□□□ -0.64
VSIG4-203ENST00000427538 TMEM57Q8N5G2 664 aa11.03□□□□□ -0.64
VSIG4-203ENST00000427538 SUPT20HQ8NEM7 779 aa11.03□□□□□ -0.64
VSIG4-203ENST00000427538 CELF1Q92879 486 aaKnown RBP11.03□□□□□ -0.64
VSIG4-203ENST00000427538 SUCLG2Q96I99 432 aa11.03□□□□□ -0.64
VSIG4-203ENST00000427538 USP44Q9H0E7 712 aa11.03□□□□□ -0.64
VSIG4-203ENST00000427538 SEC31BQ9NQW1 1179 aa11.03□□□□□ -0.64
VSIG4-203ENST00000427538 RNF181Q9P0P0 153 aa11.03□□□□□ -0.64
VSIG4-203ENST00000427538 NSFL1CQ9UNZ2 370 aaKnown RBP11.03□□□□□ -0.64
VSIG4-203ENST00000427538 ATP6V0A2Q9Y487 856 aa11.03□□□□□ -0.64
VSIG4-203ENST00000427538 CACNA1FO60840 1977 aa11.03□□□□□ -0.64
VSIG4-203ENST00000427538 KIF13BQ9NQT8 1826 aa11.02□□□□□ -0.64
VSIG4-203ENST00000427538 C6orf229H3BNL8 230 aa11.02□□□□□ -0.65
VSIG4-203ENST00000427538 PLIN1O60240 522 aa11.02□□□□□ -0.65
VSIG4-203ENST00000427538 LMNB1P20700 586 aa11.02□□□□□ -0.65
VSIG4-203ENST00000427538 CASP7P55210 303 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms