RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 TLR7Q9NYK1 1049 aaKnown RBP5.46□□□□□ -1.54
SF3B1-205ENST00000424674 KCNMB2Q9Y691 235 aa5.46□□□□□ -1.54
SF3B1-205ENST00000424674 TNFRSF10BO14763 440 aa5.45□□□□□ -1.54
SF3B1-205ENST00000424674 PSAPP07602 524 aa5.45□□□□□ -1.54
SF3B1-205ENST00000424674 NRG1Q02297 640 aaPredicted RBP5.45□□□□□ -1.54
SF3B1-205ENST00000424674 PLAURQ03405 335 aa5.45□□□□□ -1.54
SF3B1-205ENST00000424674 MBTPS1Q14703 1052 aa5.45□□□□□ -1.54
SF3B1-205ENST00000424674 GRIK5Q16478 980 aa5.45□□□□□ -1.54
SF3B1-205ENST00000424674 RSPO4Q2I0M5 234 aaPredicted RBP5.45□□□□□ -1.54
SF3B1-205ENST00000424674 HFE2Q6ZVN8 426 aa5.45□□□□□ -1.54
SF3B1-205ENST00000424674 WFDC8Q8IUA0 241 aa5.45□□□□□ -1.54
SF3B1-205ENST00000424674 DTWD1Q8N5C7 304 aa5.45□□□□□ -1.54
SF3B1-205ENST00000424674 TTC9Q92623 222 aa5.45□□□□□ -1.54
SF3B1-205ENST00000424674 SMG9Q9H0W8 520 aaKnown RBP5.45□□□□□ -1.54
SF3B1-205ENST00000424674 FAM13BQ9NYF5 915 aa5.45□□□□□ -1.54
SF3B1-205ENST00000424674 MMP20O60882 483 aa5.44□□□□□ -1.54
SF3B1-205ENST00000424674 HOXD8P13378 290 aaPredicted RBP5.44□□□□□ -1.54
SF3B1-205ENST00000424674 ITGB7P26010 798 aa5.44□□□□□ -1.54
SF3B1-205ENST00000424674 SOX18P35713 384 aa5.44□□□□□ -1.54
SF3B1-205ENST00000424674 TRIP4Q15650 581 aaPredicted RBP5.44□□□□□ -1.54
SF3B1-205ENST00000424674 CCDC27Q2M243 656 aa5.44□□□□□ -1.54
SF3B1-205ENST00000424674 FAM26DQ5JW98 314 aa5.44□□□□□ -1.54
SF3B1-205ENST00000424674 NKAPLQ5M9Q1 402 aa5.44□□□□□ -1.54
SF3B1-205ENST00000424674 SHISA2Q6UWI4 295 aa5.44□□□□□ -1.54
SF3B1-205ENST00000424674 CAPN12Q6ZSI9 719 aa5.44□□□□□ -1.54
SF3B1-205ENST00000424674 ILDR2Q71H61 639 aa5.44□□□□□ -1.54
SF3B1-205ENST00000424674 TXNRD3Q86VQ6 643 aa5.44□□□□□ -1.54
SF3B1-205ENST00000424674 LENG1Q96BZ8 264 aaPredicted RBP5.44□□□□□ -1.54
SF3B1-205ENST00000424674 PPM1GO15355 546 aaPredicted RBP5.43□□□□□ -1.54
SF3B1-205ENST00000424674 DYRK3O43781 588 aa5.43□□□□□ -1.54
SF3B1-205ENST00000424674 BRD1O95696 1058 aa5.43□□□□□ -1.54
SF3B1-205ENST00000424674 GHRHP01286 108 aa5.43□□□□□ -1.54
SF3B1-205ENST00000424674 ATP2B4P23634 1241 aa5.43□□□□□ -1.54
SF3B1-205ENST00000424674 SCNN1AP37088 669 aa5.43□□□□□ -1.54
SF3B1-205ENST00000424674 ZAP70P43403 619 aa5.43□□□□□ -1.54
SF3B1-205ENST00000424674 NAA30Q147X3 362 aaPredicted RBP5.43□□□□□ -1.54
SF3B1-205ENST00000424674 NLRP13Q86W25 1043 aa5.43□□□□□ -1.54
SF3B1-205ENST00000424674 ABTB2Q8N961 1025 aa5.43□□□□□ -1.54
SF3B1-205ENST00000424674 PIK3R5Q8WYR1 880 aa5.43□□□□□ -1.54
SF3B1-205ENST00000424674 NSUN5Q96P11 429 aaKnown RBP5.43□□□□□ -1.54
SF3B1-205ENST00000424674 SLAIN2Q9P270 581 aa5.43□□□□□ -1.54
SF3B1-205ENST00000424674 USP21Q9UK80 565 aa5.43□□□□□ -1.54
SF3B1-205ENST00000424674 LOC102724428A0A0B4J2F2 783 aa5.42□□□□□ -1.54
SF3B1-205ENST00000424674 SIK1P57059 783 aa5.42□□□□□ -1.54
SF3B1-205ENST00000424674 XP32Q5T750 250 aa5.42□□□□□ -1.54
SF3B1-205ENST00000424674 FBXO11Q86XK2 927 aa5.42□□□□□ -1.54
SF3B1-205ENST00000424674 DHX37Q8IY37 1157 aaKnown RBP5.42□□□□□ -1.54
SF3B1-205ENST00000424674 UBE2Q2Q8WVN8 375 aa5.42□□□□□ -1.54
SF3B1-205ENST00000424674 PLD4Q96BZ4 506 aa5.42□□□□□ -1.54
SF3B1-205ENST00000424674 RBSNQ9H1K0 784 aa5.42□□□□□ -1.54
SF3B1-205ENST00000424674 UBAP1LF5GYI3 381 aa5.41□□□□□ -1.54
SF3B1-205ENST00000424674 J3QW42 95 aa5.41□□□□□ -1.54
SF3B1-205ENST00000424674 STIM2Q9P246 746 aa5.41□□□□□ -1.54
SF3B1-205ENST00000424674 FNDC3AQ9Y2H6 1198 aaKnown RBP5.41□□□□□ -1.54
SF3B1-205ENST00000424674 GDF6Q6KF10 455 aaPredicted RBP5.4□□□□□ -1.54
SF3B1-205ENST00000424674 Q8N3U1 123 aa5.4□□□□□ -1.54
SF3B1-205ENST00000424674 OR13H1Q8NG92 308 aa5.4□□□□□ -1.54
SF3B1-205ENST00000424674 GPR152Q8TDT2 470 aa5.4□□□□□ -1.54
SF3B1-205ENST00000424674 USTQ9Y2C2 406 aa5.4□□□□□ -1.54
SF3B1-205ENST00000424674 DEAF1O75398 565 aaPredicted RBP5.39□□□□□ -1.55
SF3B1-205ENST00000424674 H2AFB1P0C5Y9 115 aa5.39□□□□□ -1.55
SF3B1-205ENST00000424674 H2AFB2P0C5Z0 115 aa5.39□□□□□ -1.55
SF3B1-205ENST00000424674 ZMYM1Q5SVZ6 1142 aa5.39□□□□□ -1.55
SF3B1-205ENST00000424674 IGF2-ASQ6U949 168 aa5.39□□□□□ -1.55
SF3B1-205ENST00000424674 SSBP4Q9BWG4 385 aaPredicted RBP5.39□□□□□ -1.55
SF3B1-205ENST00000424674 SEPT3Q9UH03 358 aa5.39□□□□□ -1.55
SF3B1-205ENST00000424674 ZBTB39O15060 712 aa5.38□□□□□ -1.55
SF3B1-205ENST00000424674 HYAL2Q12891 473 aa5.38□□□□□ -1.55
SF3B1-205ENST00000424674 TTC39BQ5VTQ0 682 aaPredicted RBP5.38□□□□□ -1.55
SF3B1-205ENST00000424674 SND1Q7KZF4 910 aaKnown RBP eCLIP5.38□□□□□ -1.55
SF3B1-205ENST00000424674 IL22RA1Q8N6P7 574 aa5.38□□□□□ -1.55
SF3B1-205ENST00000424674 WFDC12Q8WWY7 111 aa5.38□□□□□ -1.55
SF3B1-205ENST00000424674 TP53INP1Q96A56 240 aa5.38□□□□□ -1.55
SF3B1-205ENST00000424674 SRA1Q9HD15 236 aaKnown RBP5.38□□□□□ -1.55
SF3B1-205ENST00000424674 ABI2Q9NYB9 513 aaPredicted RBP5.38□□□□□ -1.55
SF3B1-205ENST00000424674 TRIM33Q9UPN9 1127 aa5.38□□□□□ -1.55
SF3B1-205ENST00000424674 DLL1O00548 723 aa5.37□□□□□ -1.55
SF3B1-205ENST00000424674 NCLP19338 710 aaKnown RBP5.37□□□□□ -1.55
SF3B1-205ENST00000424674 NOS3P29474 1203 aa5.37□□□□□ -1.55
SF3B1-205ENST00000424674 IREB2P48200 963 aaKnown RBP5.37□□□□□ -1.55
SF3B1-205ENST00000424674 PRSS36Q5K4E3 855 aa5.37□□□□□ -1.55
SF3B1-205ENST00000424674 MAP4K3Q8IVH8 894 aa5.37□□□□□ -1.55
SF3B1-205ENST00000424674 CACTIN-AS1Q8N1I8 211 aa5.37□□□□□ -1.55
SF3B1-205ENST00000424674 HELQQ8TDG4 1101 aa5.37□□□□□ -1.55
SF3B1-205ENST00000424674 DCAF11Q8TEB1 546 aa5.37□□□□□ -1.55
SF3B1-205ENST00000424674 SPACA7Q96KW9 195 aa5.37□□□□□ -1.55
SF3B1-205ENST00000424674 IGSF5Q9NSI5 407 aa5.37□□□□□ -1.55
SF3B1-205ENST00000424674 SCO2A0A1W2PP80 73 aa5.36□□□□□ -1.55
SF3B1-205ENST00000424674 KIF4AO95239 1232 aa5.36□□□□□ -1.55
SF3B1-205ENST00000424674 ATP11AP98196 1134 aa5.36□□□□□ -1.55
SF3B1-205ENST00000424674 COL13A1Q5TAT6 717 aaPredicted RBP5.36□□□□□ -1.55
SF3B1-205ENST00000424674 PDE12Q6L8Q7 609 aaKnown RBP5.36□□□□□ -1.55
SF3B1-205ENST00000424674 ATCAYQ86WG3 371 aa5.36□□□□□ -1.55
SF3B1-205ENST00000424674 FAM9AQ8IZU1 332 aaPredicted RBP5.36□□□□□ -1.55
SF3B1-205ENST00000424674 NUDT16Q96DE0 195 aaKnown RBP5.36□□□□□ -1.55
SF3B1-205ENST00000424674 MEGF10Q96KG7 1140 aa5.36□□□□□ -1.55
SF3B1-205ENST00000424674 MRPL18Q9H0U6 180 aaKnown RBP5.36□□□□□ -1.55
SF3B1-205ENST00000424674 MUC3BQ9H195 1237 aa5.36□□□□□ -1.55
SF3B1-205ENST00000424674 TMEM88BA6NKF7 163 aa5.35□□□□□ -1.55
SF3B1-205ENST00000424674 SMNDC1O75940 238 aaKnown RBP eCLIP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms