RNA–Protein interactions for RNA: ENST00000423335.2

SHISA9-201, Transcript of shisa family member 9, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHISA9, Length 4,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-201ENST00000423335 CARD10Q9BWT7 1032 aa17.6■□□□□ 0.41
SHISA9-201ENST00000423335 TRAPPC3LQ5T215 181 aa17.6■□□□□ 0.41
SHISA9-201ENST00000423335 UBAC1Q9BSL1 405 aa17.6■□□□□ 0.41
SHISA9-201ENST00000423335 RIMBP2O15034 1052 aa17.59■□□□□ 0.41
SHISA9-201ENST00000423335 IMMTQ16891 758 aaKnown RBP17.59■□□□□ 0.41
SHISA9-201ENST00000423335 ANO6Q4KMQ2 910 aa17.59■□□□□ 0.41
SHISA9-201ENST00000423335 MSL1Q68DK7 614 aa17.59■□□□□ 0.41
SHISA9-201ENST00000423335 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.59■□□□□ 0.41
SHISA9-201ENST00000423335 V9GYY5 206 aaPredicted RBP17.59■□□□□ 0.41
SHISA9-201ENST00000423335 ADGRB3O60242 1522 aa17.59■□□□□ 0.41
SHISA9-201ENST00000423335 APBA3O96018 575 aa17.59■□□□□ 0.41
SHISA9-201ENST00000423335 POLR3DP05423 398 aaPredicted RBP17.59■□□□□ 0.41
SHISA9-201ENST00000423335 NOL7Q9UMY1 257 aaKnown RBP17.59■□□□□ 0.41
SHISA9-201ENST00000423335 SOS1Q07889 1333 aaPredicted RBP17.59■□□□□ 0.41
SHISA9-201ENST00000423335 CFAP100Q494V2 611 aa17.59■□□□□ 0.41
SHISA9-201ENST00000423335 SMIM5Q71RC9 77 aa17.59■□□□□ 0.41
SHISA9-201ENST00000423335 CHST3Q7LGC8 479 aa17.59■□□□□ 0.41
SHISA9-201ENST00000423335 TRIM37O94972 964 aa17.58■□□□□ 0.41
SHISA9-201ENST00000423335 DNAJC25Q9H1X3 360 aa17.58■□□□□ 0.41
SHISA9-201ENST00000423335 ZNF445P59923 1031 aa17.58■□□□□ 0.4
SHISA9-201ENST00000423335 SLC9C2Q5TAH2 1124 aa17.58■□□□□ 0.4
SHISA9-201ENST00000423335 FSIP1Q8NA03 581 aa17.58■□□□□ 0.4
SHISA9-201ENST00000423335 IL15P40933 162 aaPredicted RBP17.58■□□□□ 0.4
SHISA9-201ENST00000423335 LUZP1Q86V48 1076 aa17.58■□□□□ 0.4
SHISA9-201ENST00000423335 MIGA1Q8NAN2 632 aa17.58■□□□□ 0.4
SHISA9-201ENST00000423335 ITGA6P23229 1130 aa17.57■□□□□ 0.4
SHISA9-201ENST00000423335 CCDC87Q9NVE4 849 aa17.57■□□□□ 0.4
SHISA9-201ENST00000423335 TMX1Q9H3N1 280 aa17.57■□□□□ 0.4
SHISA9-201ENST00000423335 SH3TC1Q8TE82 1336 aa17.57■□□□□ 0.4
SHISA9-201ENST00000423335 ADAMTS13Q76LX8 1427 aa17.57■□□□□ 0.4
SHISA9-201ENST00000423335 CCDC69A6NI79 296 aa17.57■□□□□ 0.4
SHISA9-201ENST00000423335 GPS2Q13227 327 aa17.57■□□□□ 0.4
SHISA9-201ENST00000423335 CTNNA3Q9UI47 895 aa17.57■□□□□ 0.4
SHISA9-201ENST00000423335 LOC102724428A0A0B4J2F2 783 aa17.56■□□□□ 0.4
SHISA9-201ENST00000423335 PTGS1P23219 599 aa17.56■□□□□ 0.4
SHISA9-201ENST00000423335 SIK1P57059 783 aa17.56■□□□□ 0.4
SHISA9-201ENST00000423335 NOC3LQ8WTT2 800 aaKnown RBP17.56■□□□□ 0.4
SHISA9-201ENST00000423335 U3KPZ7 1027 aaPredicted RBP17.56■□□□□ 0.4
SHISA9-201ENST00000423335 MPHOSPH10O00566 681 aaKnown RBP17.56■□□□□ 0.4
SHISA9-201ENST00000423335 ZNF213O14771 459 aa17.56■□□□□ 0.4
SHISA9-201ENST00000423335 UVSSAQ2YD98 709 aa17.56■□□□□ 0.4
SHISA9-201ENST00000423335 GPT2Q8TD30 523 aa17.56■□□□□ 0.4
SHISA9-201ENST00000423335 NEK1Q96PY6 1258 aa17.56■□□□□ 0.4
SHISA9-201ENST00000423335 IPO7O95373 1038 aaKnown RBP17.56■□□□□ 0.4
SHISA9-201ENST00000423335 SLC3A2P08195 630 aaKnown RBP17.56■□□□□ 0.4
SHISA9-201ENST00000423335 SFPQP23246 707 aaKnown RBP eCLIP17.56■□□□□ 0.4
SHISA9-201ENST00000423335 PIGBQ92521 554 aa17.56■□□□□ 0.4
SHISA9-201ENST00000423335 ERVV-2B6SEH9 535 aa17.56■□□□□ 0.4
SHISA9-201ENST00000423335 MKNK2Q9HBH9 465 aa17.56■□□□□ 0.4
SHISA9-201ENST00000423335 DDX19AQ9NUU7 478 aaKnown RBP17.56■□□□□ 0.4
SHISA9-201ENST00000423335 ABCC4O15439 1325 aa17.55■□□□□ 0.4
SHISA9-201ENST00000423335 SYNMO15061 1565 aa17.55■□□□□ 0.4
SHISA9-201ENST00000423335 A0A1B0GUL7 405 aa17.55■□□□□ 0.4
SHISA9-201ENST00000423335 NEURL1BA8MQ27 555 aa17.55■□□□□ 0.4
SHISA9-201ENST00000423335 NMIQ13287 307 aaPredicted RBP17.55■□□□□ 0.4
SHISA9-201ENST00000423335 HSP90AA4PQ58FG1 418 aa17.55■□□□□ 0.4
SHISA9-201ENST00000423335 INTS4Q96HW7 963 aaKnown RBP17.55■□□□□ 0.4
SHISA9-201ENST00000423335 CCDC129Q6ZRS4 1044 aa17.55■□□□□ 0.4
SHISA9-201ENST00000423335 ANKRD20A12PQ8NF67 263 aa17.55■□□□□ 0.4
SHISA9-201ENST00000423335 FAM200AQ8TCP9 573 aa17.55■□□□□ 0.4
SHISA9-201ENST00000423335 ZBTB9Q96C00 473 aa17.55■□□□□ 0.4
SHISA9-201ENST00000423335 CAMSAP1Q5T5Y3 1602 aa17.54■□□□□ 0.4
SHISA9-201ENST00000423335 C8orf76Q96K31 380 aa17.54■□□□□ 0.4
SHISA9-201ENST00000423335 TRERF1Q96PN7 1200 aa17.54■□□□□ 0.4
SHISA9-201ENST00000423335 ANO10Q9NW15 660 aa17.54■□□□□ 0.4
SHISA9-201ENST00000423335 ST5P78524 1137 aa17.54■□□□□ 0.4
SHISA9-201ENST00000423335 CCAR1Q8IX12 1150 aaKnown RBP17.54■□□□□ 0.4
SHISA9-201ENST00000423335 CDCA7Q9BWT1 371 aaPredicted RBP17.54■□□□□ 0.4
SHISA9-201ENST00000423335 HS1BP3Q53T59 392 aa17.53■□□□□ 0.4
SHISA9-201ENST00000423335 HOXB7P09629 217 aa17.53■□□□□ 0.4
SHISA9-201ENST00000423335 CYP7A1P22680 504 aa17.53■□□□□ 0.4
SHISA9-201ENST00000423335 TYRO3Q06418 890 aa17.53■□□□□ 0.4
SHISA9-201ENST00000423335 JMYQ8N9B5 988 aa17.53■□□□□ 0.4
SHISA9-201ENST00000423335 KIF18AQ8NI77 898 aa17.53■□□□□ 0.4
SHISA9-201ENST00000423335 UBXN4Q92575 508 aa17.53■□□□□ 0.4
SHISA9-201ENST00000423335 PRIMPOLQ96LW4 560 aa17.53■□□□□ 0.4
SHISA9-201ENST00000423335 PTPRUQ92729 1446 aa17.52■□□□□ 0.4
SHISA9-201ENST00000423335 ERBB4Q15303 1308 aa17.52■□□□□ 0.4
SHISA9-201ENST00000423335 KCNQ2O43526 872 aa17.52■□□□□ 0.4
SHISA9-201ENST00000423335 URI1O94763 535 aaPredicted RBP17.52■□□□□ 0.4
SHISA9-201ENST00000423335 CCDC191Q8NCU4 936 aa17.52■□□□□ 0.4
SHISA9-201ENST00000423335 SNX14Q9Y5W7 946 aa17.52■□□□□ 0.4
SHISA9-201ENST00000423335 TULP4Q9NRJ4 1543 aa17.52■□□□□ 0.4
SHISA9-201ENST00000423335 MICU3Q86XE3 530 aa17.52■□□□□ 0.39
SHISA9-201ENST00000423335 CNBD1Q8NA66 436 aa17.52■□□□□ 0.39
SHISA9-201ENST00000423335 KDM4FA0A1W2PPD8 638 aa17.51■□□□□ 0.39
SHISA9-201ENST00000423335 EYA2O00167 538 aa17.51■□□□□ 0.39
SHISA9-201ENST00000423335 BEND3Q5T5X7 828 aa17.51■□□□□ 0.39
SHISA9-201ENST00000423335 CREB3L3Q68CJ9 461 aa17.51■□□□□ 0.39
SHISA9-201ENST00000423335 UNC5CLQ8IV45 518 aa17.51■□□□□ 0.39
SHISA9-201ENST00000423335 PAG1Q9NWQ8 432 aa17.51■□□□□ 0.39
SHISA9-201ENST00000423335 RTL1A6NKG5 1358 aa17.51■□□□□ 0.39
SHISA9-201ENST00000423335 TCIRG1Q13488 830 aa17.51■□□□□ 0.39
SHISA9-201ENST00000423335 KLHL10Q6JEL2 608 aa17.51■□□□□ 0.39
SHISA9-201ENST00000423335 TMC6Q7Z403 805 aa17.51■□□□□ 0.39
SHISA9-201ENST00000423335 IFIT3O14879 490 aaKnown RBP17.5■□□□□ 0.39
SHISA9-201ENST00000423335 BRD1O95696 1058 aa17.5■□□□□ 0.39
SHISA9-201ENST00000423335 ZNF853P0CG23 659 aa17.5■□□□□ 0.39
SHISA9-201ENST00000423335 CRACR2BQ8N4Y2 399 aaPredicted RBP17.5■□□□□ 0.39
SHISA9-201ENST00000423335 FAM227BQ96M60 508 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms