RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 EYA1Q99502 592 aa12.28□□□□□ -0.44
SEMA4D-208ENST00000422704 SETD1AO15047 1707 aaKnown RBP12.27□□□□□ -0.44
SEMA4D-208ENST00000422704 ANKRD18BA2A2Z9 1011 aa12.27□□□□□ -0.44
SEMA4D-208ENST00000422704 ANKRD62A6NC57 917 aa12.27□□□□□ -0.44
SEMA4D-208ENST00000422704 GRM8O00222 908 aa12.27□□□□□ -0.44
SEMA4D-208ENST00000422704 ERLIN1O75477 346 aa12.27□□□□□ -0.44
SEMA4D-208ENST00000422704 TIMM10P62072 90 aa12.27□□□□□ -0.44
SEMA4D-208ENST00000422704 ATP8B2P98198 1209 aa12.27□□□□□ -0.44
SEMA4D-208ENST00000422704 GTF2F1P35269 517 aaKnown RBP eCLIP12.27□□□□□ -0.45
SEMA4D-208ENST00000422704 GNG11P61952 73 aa12.27□□□□□ -0.45
SEMA4D-208ENST00000422704 NMIQ13287 307 aaPredicted RBP12.27□□□□□ -0.45
SEMA4D-208ENST00000422704 LIG1P18858 919 aa12.27□□□□□ -0.45
SEMA4D-208ENST00000422704 METAP2P50579 478 aaKnown RBP eCLIP12.27□□□□□ -0.45
SEMA4D-208ENST00000422704 NOLC1Q14978 699 aaKnown RBP eCLIP12.27□□□□□ -0.45
SEMA4D-208ENST00000422704 TDRD12Q587J7 1177 aaKnown RBP12.27□□□□□ -0.45
SEMA4D-208ENST00000422704 IFNL2Q8IZJ0 200 aa12.27□□□□□ -0.45
SEMA4D-208ENST00000422704 ARHGAP45Q92619 1136 aa12.27□□□□□ -0.45
SEMA4D-208ENST00000422704 CWC25Q9NXE8 425 aaPredicted RBP12.27□□□□□ -0.45
SEMA4D-208ENST00000422704 ZBTB7BO15156 539 aaPredicted RBP12.26□□□□□ -0.45
SEMA4D-208ENST00000422704 ACSBG1Q96GR2 724 aa12.26□□□□□ -0.45
SEMA4D-208ENST00000422704 RRAGDQ9NQL2 400 aaPredicted RBP12.26□□□□□ -0.45
SEMA4D-208ENST00000422704 SKILP12757 684 aa12.26□□□□□ -0.45
SEMA4D-208ENST00000422704 WASF1Q92558 559 aa12.26□□□□□ -0.45
SEMA4D-208ENST00000422704 KNDC1Q76NI1 1749 aa12.26□□□□□ -0.45
SEMA4D-208ENST00000422704 C6orf229H3BNL8 230 aa12.26□□□□□ -0.45
SEMA4D-208ENST00000422704 CACNA2D4Q7Z3S7 1137 aa12.26□□□□□ -0.45
SEMA4D-208ENST00000422704 LUZP1Q86V48 1076 aa12.26□□□□□ -0.45
SEMA4D-208ENST00000422704 ZNF444Q8N0Y2 327 aaPredicted RBP12.26□□□□□ -0.45
SEMA4D-208ENST00000422704 CCDC113Q9H0I3 377 aa12.26□□□□□ -0.45
SEMA4D-208ENST00000422704 CCDC194A0A1B0GVG4 234 aa12.25□□□□□ -0.45
SEMA4D-208ENST00000422704 MACROD2A1Z1Q3 448 aa12.25□□□□□ -0.45
SEMA4D-208ENST00000422704 SSRP1Q08945 709 aaKnown RBP12.25□□□□□ -0.45
SEMA4D-208ENST00000422704 CRACR2AQ9BSW2 395 aa12.25□□□□□ -0.45
SEMA4D-208ENST00000422704 GOLGA6L10A6NI86 522 aa12.25□□□□□ -0.45
SEMA4D-208ENST00000422704 TSPY2A6NKD2 308 aa12.25□□□□□ -0.45
SEMA4D-208ENST00000422704 PTGS1P23219 599 aa12.25□□□□□ -0.45
SEMA4D-208ENST00000422704 CLCN1P35523 988 aa12.25□□□□□ -0.45
SEMA4D-208ENST00000422704 APOBRQ0VD83 1088 aa12.25□□□□□ -0.45
SEMA4D-208ENST00000422704 SLC9C2Q5TAH2 1124 aa12.25□□□□□ -0.45
SEMA4D-208ENST00000422704 ZMYND15Q9H091 742 aa12.25□□□□□ -0.45
SEMA4D-208ENST00000422704 HMGB1P09429 215 aaKnown RBP12.25□□□□□ -0.45
SEMA4D-208ENST00000422704 SYT1P21579 422 aa12.25□□□□□ -0.45
SEMA4D-208ENST00000422704 CCDC96Q2M329 555 aa12.25□□□□□ -0.45
SEMA4D-208ENST00000422704 AOPEPQ8N6M6 819 aa12.25□□□□□ -0.45
SEMA4D-208ENST00000422704 DNAI1Q9UI46 699 aa12.25□□□□□ -0.45
SEMA4D-208ENST00000422704 IL16Q14005 1332 aa12.25□□□□□ -0.45
SEMA4D-208ENST00000422704 CCDC196A0A1B0GTZ2 297 aa12.25□□□□□ -0.45
SEMA4D-208ENST00000422704 KIF5CO60282 957 aa12.25□□□□□ -0.45
SEMA4D-208ENST00000422704 SNRPA1P09661 255 aaKnown RBP12.25□□□□□ -0.45
SEMA4D-208ENST00000422704 TCERG1LQ5VWI1 586 aa12.25□□□□□ -0.45
SEMA4D-208ENST00000422704 CCDC129Q6ZRS4 1044 aa12.25□□□□□ -0.45
SEMA4D-208ENST00000422704 PAF1Q8N7H5 531 aa12.25□□□□□ -0.45
SEMA4D-208ENST00000422704 DNAJC5Q9H3Z4 198 aa12.25□□□□□ -0.45
SEMA4D-208ENST00000422704 UBR1Q8IWV7 1749 aa12.25□□□□□ -0.45
SEMA4D-208ENST00000422704 POLR3AO14802 1390 aaPredicted RBP12.24□□□□□ -0.45
SEMA4D-208ENST00000422704 PIK3R4Q99570 1358 aa12.24□□□□□ -0.45
SEMA4D-208ENST00000422704 MYO1BO43795 1136 aa12.24□□□□□ -0.45
SEMA4D-208ENST00000422704 STX17P56962 302 aa12.24□□□□□ -0.45
SEMA4D-208ENST00000422704 RAB3GAP1Q15042 981 aa12.24□□□□□ -0.45
SEMA4D-208ENST00000422704 CRACR2BQ8N4Y2 399 aaPredicted RBP12.24□□□□□ -0.45
SEMA4D-208ENST00000422704 USP26Q9BXU7 913 aa12.24□□□□□ -0.45
SEMA4D-208ENST00000422704 ZPR1O75312 459 aa12.24□□□□□ -0.45
SEMA4D-208ENST00000422704 F13A1P00488 732 aa12.24□□□□□ -0.45
SEMA4D-208ENST00000422704 CHMLP26374 656 aa12.24□□□□□ -0.45
SEMA4D-208ENST00000422704 SYKP43405 635 aa12.24□□□□□ -0.45
SEMA4D-208ENST00000422704 SNW1Q13573 536 aaKnown RBP12.24□□□□□ -0.45
SEMA4D-208ENST00000422704 CCDC102BQ68D86 513 aa12.24□□□□□ -0.45
SEMA4D-208ENST00000422704 DRC1Q96MC2 740 aa12.24□□□□□ -0.45
SEMA4D-208ENST00000422704 RNF123Q5XPI4 1314 aa12.24□□□□□ -0.45
SEMA4D-208ENST00000422704 NRXN3Q9Y4C0 1643 aa12.24□□□□□ -0.45
SEMA4D-208ENST00000422704 EIF3JO75822 258 aaKnown RBP12.24□□□□□ -0.45
SEMA4D-208ENST00000422704 UBA7P41226 1012 aa12.24□□□□□ -0.45
SEMA4D-208ENST00000422704 OTUD7BQ6GQQ9 843 aa12.24□□□□□ -0.45
SEMA4D-208ENST00000422704 SIRT1Q96EB6 747 aa12.24□□□□□ -0.45
SEMA4D-208ENST00000422704 EXOC5O00471 708 aa12.23□□□□□ -0.45
SEMA4D-208ENST00000422704 JAKMIP3Q5VZ66 844 aa12.23□□□□□ -0.45
SEMA4D-208ENST00000422704 MFSD6Q6ZSS7 791 aa12.23□□□□□ -0.45
SEMA4D-208ENST00000422704 MIGA1Q8NAN2 632 aa12.23□□□□□ -0.45
SEMA4D-208ENST00000422704 ALG1Q9BT22 464 aa12.23□□□□□ -0.45
SEMA4D-208ENST00000422704 RBSNQ9H1K0 784 aa12.23□□□□□ -0.45
SEMA4D-208ENST00000422704 NCOA7Q8NI08 942 aa12.23□□□□□ -0.45
SEMA4D-208ENST00000422704 PNMA6EA0A0J9YXQ4 647 aa12.23□□□□□ -0.45
SEMA4D-208ENST00000422704 F8W031 263 aaPredicted RBP12.23□□□□□ -0.45
SEMA4D-208ENST00000422704 N4BP3O15049 544 aa12.23□□□□□ -0.45
SEMA4D-208ENST00000422704 ZSCAN12O43309 604 aa12.23□□□□□ -0.45
SEMA4D-208ENST00000422704 SLC5A1P13866 664 aa12.23□□□□□ -0.45
SEMA4D-208ENST00000422704 MTIF2P46199 727 aaKnown RBP12.23□□□□□ -0.45
SEMA4D-208ENST00000422704 UBASH3AP57075 661 aa12.23□□□□□ -0.45
SEMA4D-208ENST00000422704 STX1AQ16623 288 aa12.23□□□□□ -0.45
SEMA4D-208ENST00000422704 ZKSCAN3Q9BRR0 538 aa12.23□□□□□ -0.45
SEMA4D-208ENST00000422704 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.23□□□□□ -0.45
SEMA4D-208ENST00000422704 FAM107BQ9H098 131 aa12.23□□□□□ -0.45
SEMA4D-208ENST00000422704 LUC7LQ9NQ29 371 aaKnown RBP12.23□□□□□ -0.45
SEMA4D-208ENST00000422704 SEC63Q9UGP8 760 aaKnown RBP12.23□□□□□ -0.45
SEMA4D-208ENST00000422704 CASQ1P31415 396 aa12.23□□□□□ -0.45
SEMA4D-208ENST00000422704 SPA17Q15506 151 aa12.23□□□□□ -0.45
SEMA4D-208ENST00000422704 CCDC12Q8WUD4 166 aaPredicted RBP12.23□□□□□ -0.45
SEMA4D-208ENST00000422704 EDC3Q96F86 508 aaKnown RBP12.23□□□□□ -0.45
SEMA4D-208ENST00000422704 CEP131Q9UPN4 1083 aa12.23□□□□□ -0.45
SEMA4D-208ENST00000422704 MAP3K19Q56UN5 1328 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms