RNA–Protein interactions for RNA: ENST00000421386.1

SCG2-202, Transcript of secretogranin II, humanhuman

TSL 3

Gene SCG2, Length 589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-202ENST00000421386 KIAA2012Q0VF49 1180 aa6.32□□□□□ -1.4
SCG2-202ENST00000421386 TRDNQ13061 729 aa6.32□□□□□ -1.4
SCG2-202ENST00000421386 SLFNL1Q499Z3 407 aa6.32□□□□□ -1.4
SCG2-202ENST00000421386 MUM1L1Q5H9M0 696 aa6.32□□□□□ -1.4
SCG2-202ENST00000421386 NBPF6Q5VWK0 638 aa6.32□□□□□ -1.4
SCG2-202ENST00000421386 NLRP8Q86W28 1048 aa6.32□□□□□ -1.4
SCG2-202ENST00000421386 NBPF5PQ86XG9 351 aaPredicted RBP6.32□□□□□ -1.4
SCG2-202ENST00000421386 GAS2L3Q86XJ1 694 aa6.32□□□□□ -1.4
SCG2-202ENST00000421386 SIRT1Q96EB6 747 aa6.32□□□□□ -1.4
SCG2-202ENST00000421386 NBPF4Q96M43 638 aa6.32□□□□□ -1.4
SCG2-202ENST00000421386 PSMG3-AS1Q96PY0 264 aa6.32□□□□□ -1.4
SCG2-202ENST00000421386 ZIC5Q96T25 663 aa6.32□□□□□ -1.4
SCG2-202ENST00000421386 MDFIQ99750 246 aa6.32□□□□□ -1.4
SCG2-202ENST00000421386 SEMA6BQ9H3T3 888 aa6.32□□□□□ -1.4
SCG2-202ENST00000421386 DIAPH3Q9NSV4 1193 aa6.32□□□□□ -1.4
SCG2-202ENST00000421386 TERF2IPQ9NYB0 399 aa6.32□□□□□ -1.4
SCG2-202ENST00000421386 SH3BP1Q9Y3L3 701 aa6.32□□□□□ -1.4
SCG2-202ENST00000421386 KNSTRNQ9Y448 316 aa6.32□□□□□ -1.4
SCG2-202ENST00000421386 YEATS2Q9ULM3 1422 aa6.32□□□□□ -1.4
SCG2-202ENST00000421386 LOC102724159A0A0B4J2E5 919 aa6.31□□□□□ -1.4
SCG2-202ENST00000421386 PIK3CDO00329 1044 aa6.31□□□□□ -1.4
SCG2-202ENST00000421386 CTIFO43310 598 aaKnown RBP6.31□□□□□ -1.4
SCG2-202ENST00000421386 ADH6P28332 368 aa6.31□□□□□ -1.4
SCG2-202ENST00000421386 ABL2P42684 1182 aa6.31□□□□□ -1.4
SCG2-202ENST00000421386 XPCQ01831 940 aaPredicted RBP6.31□□□□□ -1.4
SCG2-202ENST00000421386 PWP2Q15269 919 aaKnown RBP6.31□□□□□ -1.4
SCG2-202ENST00000421386 FIGNL1Q6PIW4 674 aa6.31□□□□□ -1.4
SCG2-202ENST00000421386 CASC1Q6TDU7 716 aa6.31□□□□□ -1.4
SCG2-202ENST00000421386 OTUD6BQ8N6M0 293 aa6.31□□□□□ -1.4
SCG2-202ENST00000421386 TBC1D32Q96NH3 1257 aa6.31□□□□□ -1.4
SCG2-202ENST00000421386 PLVAPQ9BX97 442 aa6.31□□□□□ -1.4
SCG2-202ENST00000421386 NIFKQ9BYG3 293 aaKnown RBP6.31□□□□□ -1.4
SCG2-202ENST00000421386 GZF1Q9H116 711 aaPredicted RBP6.31□□□□□ -1.4
SCG2-202ENST00000421386 RASSF4Q9H2L5 321 aa6.31□□□□□ -1.4
SCG2-202ENST00000421386 PRM3Q9NNZ6 103 aa6.31□□□□□ -1.4
SCG2-202ENST00000421386 GOLGA6L6A8MZA4 724 aa6.3□□□□□ -1.4
SCG2-202ENST00000421386 GOLIM4O00461 696 aa6.3□□□□□ -1.4
SCG2-202ENST00000421386 EFSO43281 561 aa6.3□□□□□ -1.4
SCG2-202ENST00000421386 DHX16O60231 1041 aaKnown RBP6.3□□□□□ -1.4
SCG2-202ENST00000421386 REC8O95072 547 aa6.3□□□□□ -1.4
SCG2-202ENST00000421386 DDIT3P35638 169 aa6.3□□□□□ -1.4
SCG2-202ENST00000421386 TXLNAP40222 546 aa6.3□□□□□ -1.4
SCG2-202ENST00000421386 MCM6Q14566 821 aa6.3□□□□□ -1.4
SCG2-202ENST00000421386 KLHL40Q2TBA0 621 aa6.3□□□□□ -1.4
SCG2-202ENST00000421386 ARSJQ5FYB0 599 aaPredicted RBP6.3□□□□□ -1.4
SCG2-202ENST00000421386 CT47A1Q5JQC4 288 aaPredicted RBP6.3□□□□□ -1.4
SCG2-202ENST00000421386 FAM182BQ5T319 152 aa6.3□□□□□ -1.4
SCG2-202ENST00000421386 ZNF468Q5VIY5 522 aaPredicted RBP6.3□□□□□ -1.4
SCG2-202ENST00000421386 CERS3Q8IU89 383 aa6.3□□□□□ -1.4
SCG2-202ENST00000421386 GPATCH11Q8N954 259 aa6.3□□□□□ -1.4
SCG2-202ENST00000421386 PLPP7Q8NBV4 271 aa6.3□□□□□ -1.4
SCG2-202ENST00000421386 ZDHHC1Q8WTX9 485 aa6.3□□□□□ -1.4
SCG2-202ENST00000421386 FAM210AQ96ND0 272 aa6.3□□□□□ -1.4
SCG2-202ENST00000421386 TACO1Q9BSH4 297 aaKnown RBP6.3□□□□□ -1.4
SCG2-202ENST00000421386 DDX41Q9UJV9 622 aaKnown RBP6.3□□□□□ -1.4
SCG2-202ENST00000421386 BRD4O60885 1362 aaPredicted RBP6.3□□□□□ -1.4
SCG2-202ENST00000421386 GOLGA6L22H0YM25 854 aa6.29□□□□□ -1.4
SCG2-202ENST00000421386 ZNF853P0CG23 659 aa6.29□□□□□ -1.4
SCG2-202ENST00000421386 ANAPC15P60006 121 aa6.29□□□□□ -1.4
SCG2-202ENST00000421386 COL9A3Q14050 684 aaPredicted RBP6.29□□□□□ -1.4
SCG2-202ENST00000421386 MTFR1Q15390 333 aa6.29□□□□□ -1.4
SCG2-202ENST00000421386 RSPO4Q2I0M5 234 aaPredicted RBP6.29□□□□□ -1.4
SCG2-202ENST00000421386 KRT222Q8N1A0 295 aa6.29□□□□□ -1.4
SCG2-202ENST00000421386 C1orf216Q8TAB5 229 aa6.29□□□□□ -1.4
SCG2-202ENST00000421386 PNISRQ8TF01 805 aaKnown RBP6.29□□□□□ -1.4
SCG2-202ENST00000421386 SLC4A9Q96Q91 983 aa6.29□□□□□ -1.4
SCG2-202ENST00000421386 PANK3Q9H999 370 aa6.29□□□□□ -1.4
SCG2-202ENST00000421386 SPTLC3Q9NUV7 552 aa6.29□□□□□ -1.4
SCG2-202ENST00000421386 NOP53Q9NZM5 478 aaKnown RBP6.29□□□□□ -1.4
SCG2-202ENST00000421386 PCDHGA11Q9Y5H2 935 aa6.29□□□□□ -1.4
SCG2-202ENST00000421386 ARAP1Q96P48 1450 aa6.28□□□□□ -1.4
SCG2-202ENST00000421386 UACAQ9BZF9 1416 aa6.28□□□□□ -1.4
SCG2-202ENST00000421386 A6NJY4 79 aa6.28□□□□□ -1.4
SCG2-202ENST00000421386 FAM229AH3BQW9 127 aa6.28□□□□□ -1.4
SCG2-202ENST00000421386 PPP1R12AO14974 1030 aaPredicted RBP6.28□□□□□ -1.4
SCG2-202ENST00000421386 FAM157BP0CG42 384 aa6.28□□□□□ -1.4
SCG2-202ENST00000421386 HSPA5P11021 654 aaKnown RBP6.28□□□□□ -1.4
SCG2-202ENST00000421386 NEFHP12036 1026 aa6.28□□□□□ -1.4
SCG2-202ENST00000421386 GSCP56915 257 aaPredicted RBP6.28□□□□□ -1.4
SCG2-202ENST00000421386 CHAF1AQ13111 956 aaPredicted RBP6.28□□□□□ -1.4
SCG2-202ENST00000421386 FKBP5Q13451 457 aaPredicted RBP6.28□□□□□ -1.4
SCG2-202ENST00000421386 SH3PXD2AQ5TCZ1 1133 aa6.28□□□□□ -1.4
SCG2-202ENST00000421386 C8orf86Q6ZUL3 223 aa6.28□□□□□ -1.4
SCG2-202ENST00000421386 CCDC91Q7Z6B0 441 aa6.28□□□□□ -1.4
SCG2-202ENST00000421386 PIBF1Q8WXW3 757 aa6.28□□□□□ -1.4
SCG2-202ENST00000421386 FAM53CQ9NYF3 392 aa6.28□□□□□ -1.4
SCG2-202ENST00000421386 DHX29Q7Z478 1369 aaKnown RBP6.28□□□□□ -1.4
SCG2-202ENST00000421386 CCDC18Q5T9S5 1454 aa6.28□□□□□ -1.4
SCG2-202ENST00000421386 MIA2Q96PC5 1412 aa6.27□□□□□ -1.41
SCG2-202ENST00000421386 LIG1P18858 919 aa6.27□□□□□ -1.41
SCG2-202ENST00000421386 CASQ1P31415 396 aa6.27□□□□□ -1.41
SCG2-202ENST00000421386 CYP2C19P33261 490 aa6.27□□□□□ -1.41
SCG2-202ENST00000421386 TDO2P48775 406 aa6.27□□□□□ -1.41
SCG2-202ENST00000421386 OS9Q13438 667 aaPredicted RBP6.27□□□□□ -1.41
SCG2-202ENST00000421386 WASHC4Q2M389 1173 aa6.27□□□□□ -1.41
SCG2-202ENST00000421386 NKAPLQ5M9Q1 402 aa6.27□□□□□ -1.41
SCG2-202ENST00000421386 SMC5Q8IY18 1101 aa6.27□□□□□ -1.41
SCG2-202ENST00000421386 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.27□□□□□ -1.41
SCG2-202ENST00000421386 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.27□□□□□ -1.41
SCG2-202ENST00000421386 ITFG2Q969R8 447 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms