RNA–Protein interactions for RNA: ENST00000421182.5

FN1-207, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,103 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-207ENST00000421182 DYDC1Q8WWB3 177 aa12.73□□□□□ -0.37
FN1-207ENST00000421182 PPM1EQ8WY54 764 aa12.73□□□□□ -0.37
FN1-207ENST00000421182 HSPA2P54652 639 aa12.73□□□□□ -0.37
FN1-207ENST00000421182 MAP3K5Q99683 1374 aa12.73□□□□□ -0.37
FN1-207ENST00000421182 RBM25P49756 843 aaKnown RBP12.72□□□□□ -0.37
FN1-207ENST00000421182 KLHL10Q6JEL2 608 aa12.72□□□□□ -0.37
FN1-207ENST00000421182 DZIP3Q86Y13 1208 aaKnown RBP12.72□□□□□ -0.37
FN1-207ENST00000421182 NEK1Q96PY6 1258 aa12.72□□□□□ -0.37
FN1-207ENST00000421182 CTAGE1Q96RT6 745 aa12.72□□□□□ -0.37
FN1-207ENST00000421182 BACH2Q9BYV9 841 aa12.72□□□□□ -0.37
FN1-207ENST00000421182 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.72□□□□□ -0.37
FN1-207ENST00000421182 CCDC40Q4G0X9 1142 aa12.72□□□□□ -0.37
FN1-207ENST00000421182 CASQ1P31415 396 aa12.72□□□□□ -0.37
FN1-207ENST00000421182 STX1AQ16623 288 aa12.72□□□□□ -0.37
FN1-207ENST00000421182 CEP152O94986 1710 aa12.72□□□□□ -0.37
FN1-207ENST00000421182 CYP7A1P22680 504 aa12.72□□□□□ -0.37
FN1-207ENST00000421182 GNA11P29992 359 aa12.72□□□□□ -0.37
FN1-207ENST00000421182 USP8P40818 1118 aa12.72□□□□□ -0.37
FN1-207ENST00000421182 CEP83Q9Y592 693 aa12.72□□□□□ -0.37
FN1-207ENST00000421182 ARHGEF5Q12774 1597 aa12.72□□□□□ -0.37
FN1-207ENST00000421182 KRT13P13646 458 aa12.72□□□□□ -0.37
FN1-207ENST00000421182 PLS1Q14651 629 aa12.71□□□□□ -0.37
FN1-207ENST00000421182 VSIG10Q8N0Z9 540 aa12.71□□□□□ -0.37
FN1-207ENST00000421182 MAGEB6P1A0A0J9YX57 407 aa12.71□□□□□ -0.37
FN1-207ENST00000421182 ZBTB43O43298 467 aa12.71□□□□□ -0.37
FN1-207ENST00000421182 RTN1Q16799 776 aa12.71□□□□□ -0.37
FN1-207ENST00000421182 PDCL2Q8N4E4 241 aa12.71□□□□□ -0.37
FN1-207ENST00000421182 KSR2Q6VAB6 950 aa12.71□□□□□ -0.37
FN1-207ENST00000421182 PARP10Q53GL7 1025 aa12.71□□□□□ -0.37
FN1-207ENST00000421182 FILIP1Q7Z7B0 1213 aa12.71□□□□□ -0.37
FN1-207ENST00000421182 RRP36Q96EU6 259 aaKnown RBP12.71□□□□□ -0.37
FN1-207ENST00000421182 CA8P35219 290 aa12.71□□□□□ -0.38
FN1-207ENST00000421182 CHRNA2Q15822 529 aa12.71□□□□□ -0.38
FN1-207ENST00000421182 USP16Q9Y5T5 823 aa12.71□□□□□ -0.38
FN1-207ENST00000421182 POTEB2H3BUK9 544 aa12.7□□□□□ -0.38
FN1-207ENST00000421182 LDHBP07195 334 aaKnown RBP12.7□□□□□ -0.38
FN1-207ENST00000421182 TCERG1LQ5VWI1 586 aa12.7□□□□□ -0.38
FN1-207ENST00000421182 CCDC117Q8IWD4 279 aaPredicted RBP12.7□□□□□ -0.38
FN1-207ENST00000421182 THUMPD2Q9BTF0 503 aaKnown RBP12.7□□□□□ -0.38
FN1-207ENST00000421182 BABAM1Q9NWV8 329 aa12.7□□□□□ -0.38
FN1-207ENST00000421182 ATP5J2-PTCD1G3V325 749 aa12.7□□□□□ -0.38
FN1-207ENST00000421182 EIF6P56537 245 aaKnown RBP12.7□□□□□ -0.38
FN1-207ENST00000421182 MCMDC2Q4G0Z9 681 aa12.7□□□□□ -0.38
FN1-207ENST00000421182 TDRD12Q587J7 1177 aaKnown RBP12.7□□□□□ -0.38
FN1-207ENST00000421182 FAM177A1Q8N128 213 aaPredicted RBP12.7□□□□□ -0.38
FN1-207ENST00000421182 MICU3Q86XE3 530 aa12.7□□□□□ -0.38
FN1-207ENST00000421182 SMARCC2Q8TAQ2 1214 aa12.7□□□□□ -0.38
FN1-207ENST00000421182 KCNG4Q8TDN1 519 aa12.7□□□□□ -0.38
FN1-207ENST00000421182 CTNNBL1Q8WYA6 563 aaPredicted RBP12.7□□□□□ -0.38
FN1-207ENST00000421182 VAT1LQ9HCJ6 419 aa12.7□□□□□ -0.38
FN1-207ENST00000421182 BMP2KLQ5H9B9 411 aa12.7□□□□□ -0.38
FN1-207ENST00000421182 KIF18AQ8NI77 898 aa12.7□□□□□ -0.38
FN1-207ENST00000421182 RBM28Q9NW13 759 aaKnown RBP12.7□□□□□ -0.38
FN1-207ENST00000421182 FERP16591 822 aa12.7□□□□□ -0.38
FN1-207ENST00000421182 STAT6P42226 847 aa12.7□□□□□ -0.38
FN1-207ENST00000421182 MAP2K1Q02750 393 aaPredicted RBP12.7□□□□□ -0.38
FN1-207ENST00000421182 ARHGEF10LQ9HCE6 1279 aa12.7□□□□□ -0.38
FN1-207ENST00000421182 FLAD1Q8NFF5 587 aa12.7□□□□□ -0.38
FN1-207ENST00000421182 ACSBG1Q96GR2 724 aa12.7□□□□□ -0.38
FN1-207ENST00000421182 TRAPPC8Q9Y2L5 1435 aa12.69□□□□□ -0.38
FN1-207ENST00000421182 HAUS2Q9NVX0 235 aa12.69□□□□□ -0.38
FN1-207ENST00000421182 CHPF2Q9P2E5 772 aa12.69□□□□□ -0.38
FN1-207ENST00000421182 PHACTR2O75167 634 aa12.69□□□□□ -0.38
FN1-207ENST00000421182 CCDC102BQ68D86 513 aa12.69□□□□□ -0.38
FN1-207ENST00000421182 TMOD4Q9NZQ9 345 aa12.69□□□□□ -0.38
FN1-207ENST00000421182 IKBKGQ9Y6K9 419 aa12.69□□□□□ -0.38
FN1-207ENST00000421182 F6X3S4 739 aa12.69□□□□□ -0.38
FN1-207ENST00000421182 IFFO1Q0D2I5 559 aa12.69□□□□□ -0.38
FN1-207ENST00000421182 CNBD1Q8NA66 436 aa12.69□□□□□ -0.38
FN1-207ENST00000421182 SLC4A4Q9Y6R1 1079 aa12.69□□□□□ -0.38
FN1-207ENST00000421182 FSD2A1L4K1 749 aa12.69□□□□□ -0.38
FN1-207ENST00000421182 PRC1O43663 620 aa12.69□□□□□ -0.38
FN1-207ENST00000421182 SLC26A6Q9BXS9 759 aa12.69□□□□□ -0.38
FN1-207ENST00000421182 VEZTQ9HBM0 779 aa12.69□□□□□ -0.38
FN1-207ENST00000421182 TTC41PQ6P2S7 1318 aa12.68□□□□□ -0.38
FN1-207ENST00000421182 DKC1O60832 514 aaKnown RBP eCLIP12.68□□□□□ -0.382e-32■□□□□ 9.9
FN1-207ENST00000421182 UBXN4Q92575 508 aa12.68□□□□□ -0.38
FN1-207ENST00000421182 KDM5DQ9BY66 1539 aa12.68□□□□□ -0.38
FN1-207ENST00000421182 TRIM27P14373 513 aa12.68□□□□□ -0.38
FN1-207ENST00000421182 LMAN1P49257 510 aa12.68□□□□□ -0.38
FN1-207ENST00000421182 PUF60Q9UHX1 559 aaKnown RBP12.68□□□□□ -0.38
FN1-207ENST00000421182 XAGE3Q8WTP9 111 aa12.68□□□□□ -0.38
FN1-207ENST00000421182 PIK3C2GO75747 1445 aa12.68□□□□□ -0.38
FN1-207ENST00000421182 MBIPQ9NS73 344 aa12.68□□□□□ -0.38
FN1-207ENST00000421182 DENND2AQ9ULE3 1009 aa12.68□□□□□ -0.38
FN1-207ENST00000421182 FER1L4A9Z1Z3 1794 aa12.68□□□□□ -0.38
FN1-207ENST00000421182 CLTCQ00610 1675 aaKnown RBP12.67□□□□□ -0.38
FN1-207ENST00000421182 TTC6Q86TZ1 520 aa12.67□□□□□ -0.38
FN1-207ENST00000421182 PRAG1Q86YV5 1406 aa12.67□□□□□ -0.38
FN1-207ENST00000421182 GRPEL1Q9HAV7 217 aa12.67□□□□□ -0.38
FN1-207ENST00000421182 ORC3Q9UBD5 711 aaPredicted RBP12.67□□□□□ -0.38
FN1-207ENST00000421182 PTPN14Q15678 1187 aa12.67□□□□□ -0.38
FN1-207ENST00000421182 H0YIN7 160 aa12.67□□□□□ -0.38
FN1-207ENST00000421182 LIG1P18858 919 aa12.67□□□□□ -0.38
FN1-207ENST00000421182 CDAN1Q8IWY9 1227 aa12.67□□□□□ -0.38
FN1-207ENST00000421182 FSIP1Q8NA03 581 aa12.67□□□□□ -0.38
FN1-207ENST00000421182 MAGI2Q86UL8 1455 aa12.67□□□□□ -0.38
FN1-207ENST00000421182 IDEP14735 1019 aa12.67□□□□□ -0.38
FN1-207ENST00000421182 ALDH1B1P30837 517 aa12.67□□□□□ -0.38
FN1-207ENST00000421182 NAPAP54920 295 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms