RNA–Protein interactions for RNA: ENST00000420047.1

SEMA3A-202, Transcript of semaphorin 3A, humanhuman

TSL 4

Gene SEMA3A, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-202ENST00000420047 PPP1R12CQ9BZL4 782 aa7.01□□□□□ -1.29
SEMA3A-202ENST00000420047 VRTNQ9H8Y1 702 aa7.01□□□□□ -1.29
SEMA3A-202ENST00000420047 UNC13AQ9UPW8 1703 aa7.01□□□□□ -1.29
SEMA3A-202ENST00000420047 KIAA1324LA8MWY0 1029 aaPredicted RBP7□□□□□ -1.29
SEMA3A-202ENST00000420047 J3QW42 95 aa7□□□□□ -1.29
SEMA3A-202ENST00000420047 COBLO75128 1261 aa7□□□□□ -1.29
SEMA3A-202ENST00000420047 IGLV1-40P01703 118 aa7□□□□□ -1.29
SEMA3A-202ENST00000420047 CMTR1Q8N1G2 835 aaKnown RBP7□□□□□ -1.29
SEMA3A-202ENST00000420047 MMP20O60882 483 aa6.99□□□□□ -1.29
SEMA3A-202ENST00000420047 GLB1P16278 677 aa6.99□□□□□ -1.29
SEMA3A-202ENST00000420047 IRAK1P51617 712 aa6.99□□□□□ -1.29
SEMA3A-202ENST00000420047 TREML1Q86YW5 311 aa6.99□□□□□ -1.29
SEMA3A-202ENST00000420047 RGL4Q8IZJ4 473 aa6.99□□□□□ -1.29
SEMA3A-202ENST00000420047 ARXQ96QS3 562 aa6.99□□□□□ -1.29
SEMA3A-202ENST00000420047 STOML1Q9UBI4 398 aa6.99□□□□□ -1.29
SEMA3A-202ENST00000420047 PPME1Q9Y570 386 aa6.99□□□□□ -1.29
SEMA3A-202ENST00000420047 KCNMB2Q9Y691 235 aa6.99□□□□□ -1.29
SEMA3A-202ENST00000420047 DHX15O43143 795 aaKnown RBP6.98□□□□□ -1.29
SEMA3A-202ENST00000420047 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.98□□□□□ -1.29
SEMA3A-202ENST00000420047 PROSER2Q86WR7 435 aaPredicted RBP6.98□□□□□ -1.29
SEMA3A-202ENST00000420047 LRFN2Q9ULH4 789 aa6.98□□□□□ -1.29
SEMA3A-202ENST00000420047 USP20Q9Y2K6 914 aa6.98□□□□□ -1.29
SEMA3A-202ENST00000420047 BICRAQ9NZM4 1560 aa6.98□□□□□ -1.29
SEMA3A-202ENST00000420047 YBX3P16989 372 aaKnown RBP eCLIP6.97□□□□□ -1.29
SEMA3A-202ENST00000420047 NLRP13Q86W25 1043 aa6.97□□□□□ -1.29
SEMA3A-202ENST00000420047 NSUN5Q96P11 429 aaKnown RBP6.97□□□□□ -1.29
SEMA3A-202ENST00000420047 UBL7Q96S82 380 aaPredicted RBP6.97□□□□□ -1.29
SEMA3A-202ENST00000420047 CEP41Q9BYV8 373 aa6.97□□□□□ -1.29
SEMA3A-202ENST00000420047 KRTAP4-8A0A0G2JLE6 195 aa6.96□□□□□ -1.3
SEMA3A-202ENST00000420047 MED26O95402 600 aa6.96□□□□□ -1.3
SEMA3A-202ENST00000420047 UVSSAQ2YD98 709 aa6.96□□□□□ -1.3
SEMA3A-202ENST00000420047 INTS5Q6P9B9 1019 aaKnown RBP6.96□□□□□ -1.3
SEMA3A-202ENST00000420047 AGGF1Q8N302 714 aaeCLIP6.96□□□□□ -1.3
SEMA3A-202ENST00000420047 CALR3Q96L12 384 aaKnown RBP6.96□□□□□ -1.3
SEMA3A-202ENST00000420047 TRIM33Q9UPN9 1127 aa6.96□□□□□ -1.3
SEMA3A-202ENST00000420047 LMOD1P29536 600 aaPredicted RBP6.95□□□□□ -1.3
SEMA3A-202ENST00000420047 GRIK1P39086 918 aa6.95□□□□□ -1.3
SEMA3A-202ENST00000420047 GP2P55259 537 aaKnown RBP6.95□□□□□ -1.3
SEMA3A-202ENST00000420047 FAM200AQ8TCP9 573 aa6.95□□□□□ -1.3
SEMA3A-202ENST00000420047 OAS3Q9Y6K5 1087 aaKnown RBP6.95□□□□□ -1.3
SEMA3A-202ENST00000420047 TGFB1P01137 390 aa6.94□□□□□ -1.3
SEMA3A-202ENST00000420047 TAL1P17542 331 aaPredicted RBP6.94□□□□□ -1.3
SEMA3A-202ENST00000420047 CD68P34810 354 aaPredicted RBP6.94□□□□□ -1.3
SEMA3A-202ENST00000420047 COX20Q5RI15 118 aa6.94□□□□□ -1.3
SEMA3A-202ENST00000420047 ZDHHC13Q8IUH4 622 aa6.94□□□□□ -1.3
SEMA3A-202ENST00000420047 ARMC10Q8N2F6 343 aa6.94□□□□□ -1.3
SEMA3A-202ENST00000420047 ZCCHC6Q5VYS8 1495 aaKnown RBP6.93□□□□□ -1.3
SEMA3A-202ENST00000420047 BRD2P25440 801 aaKnown RBP6.93□□□□□ -1.3
SEMA3A-202ENST00000420047 NFIAQ12857 509 aa6.93□□□□□ -1.3
SEMA3A-202ENST00000420047 GALNT11Q8NCW6 608 aa6.93□□□□□ -1.3
SEMA3A-202ENST00000420047 OR13H1Q8NG92 308 aa6.93□□□□□ -1.3
SEMA3A-202ENST00000420047 CLUAP1Q96AJ1 413 aa6.93□□□□□ -1.3
SEMA3A-202ENST00000420047 SPACA7Q96KW9 195 aa6.93□□□□□ -1.3
SEMA3A-202ENST00000420047 FAM13BQ9NYF5 915 aa6.93□□□□□ -1.3
SEMA3A-202ENST00000420047 LINC01387J3KSC0 135 aa6.92□□□□□ -1.3
SEMA3A-202ENST00000420047 HYAL2Q12891 473 aa6.92□□□□□ -1.3
SEMA3A-202ENST00000420047 RNF43Q68DV7 783 aa6.92□□□□□ -1.3
SEMA3A-202ENST00000420047 KLHL23Q8NBE8 558 aa6.92□□□□□ -1.3
SEMA3A-202ENST00000420047 FAM46AQ96IP4 442 aaKnown RBP6.92□□□□□ -1.3
SEMA3A-202ENST00000420047 SCRIBQ14160 1630 aa6.91□□□□□ -1.3
SEMA3A-202ENST00000420047 SMNDC1O75940 238 aaKnown RBP eCLIP6.91□□□□□ -1.3
SEMA3A-202ENST00000420047 SPINK2P20155 84 aa6.91□□□□□ -1.3
SEMA3A-202ENST00000420047 CDC27P30260 824 aa6.91□□□□□ -1.3
SEMA3A-202ENST00000420047 ACAD11Q709F0 780 aa6.91□□□□□ -1.3
SEMA3A-202ENST00000420047 DTX1Q86Y01 620 aa6.91□□□□□ -1.3
SEMA3A-202ENST00000420047 PIK3R5Q8WYR1 880 aa6.91□□□□□ -1.3
SEMA3A-202ENST00000420047 UTP4Q969X6 686 aaKnown RBP6.91□□□□□ -1.3
SEMA3A-202ENST00000420047 DBNDD2Q9BQY9 259 aa6.91□□□□□ -1.3
SEMA3A-202ENST00000420047 UBAP1LF5GYI3 381 aa6.9□□□□□ -1.3
SEMA3A-202ENST00000420047 TM4SF5O14894 197 aa6.9□□□□□ -1.3
SEMA3A-202ENST00000420047 WISP1O95388 367 aa6.9□□□□□ -1.3
SEMA3A-202ENST00000420047 FKBP5Q13451 457 aaPredicted RBP6.9□□□□□ -1.3
SEMA3A-202ENST00000420047 TRIP4Q15650 581 aaPredicted RBP6.9□□□□□ -1.3
SEMA3A-202ENST00000420047 TRIM42Q8IWZ5 723 aa6.9□□□□□ -1.3
SEMA3A-202ENST00000420047 ETFBKMTQ8IXQ9 262 aa6.9□□□□□ -1.3
SEMA3A-202ENST00000420047 COL26A1Q96A83 441 aa6.9□□□□□ -1.3
SEMA3A-202ENST00000420047 MYRFLQ96LU7 910 aa6.9□□□□□ -1.3
SEMA3A-202ENST00000420047 C7orf69Q9H7B7 122 aa6.9□□□□□ -1.3
SEMA3A-202ENST00000420047 FNDC3AQ9Y2H6 1198 aaKnown RBP6.9□□□□□ -1.3
SEMA3A-202ENST00000420047 RNF114Q9Y508 228 aa6.9□□□□□ -1.3
SEMA3A-202ENST00000420047 PRR19A6NJB7 356 aa6.89□□□□□ -1.31
SEMA3A-202ENST00000420047 FSCN2O14926 492 aa6.89□□□□□ -1.31
SEMA3A-202ENST00000420047 SWI5Q1ZZU3 235 aa6.89□□□□□ -1.31
SEMA3A-202ENST00000420047 CEP135Q66GS9 1140 aa6.89□□□□□ -1.31
SEMA3A-202ENST00000420047 FAM117BQ6P1L5 589 aa6.89□□□□□ -1.31
SEMA3A-202ENST00000420047 C16orf46Q6P387 395 aa6.89□□□□□ -1.31
SEMA3A-202ENST00000420047 KIAA1211Q6ZU35 1233 aa6.89□□□□□ -1.31
SEMA3A-202ENST00000420047 CLEC10AQ8IUN9 316 aa6.89□□□□□ -1.31
SEMA3A-202ENST00000420047 A6NJR5 290 aa6.88□□□□□ -1.31
SEMA3A-202ENST00000420047 DUOXA2Q1HG44 320 aa6.88□□□□□ -1.31
SEMA3A-202ENST00000420047 COL13A1Q5TAT6 717 aaPredicted RBP6.88□□□□□ -1.31
SEMA3A-202ENST00000420047 TTC39BQ5VTQ0 682 aaPredicted RBP6.88□□□□□ -1.31
SEMA3A-202ENST00000420047 FAM83CQ9BQN1 747 aa6.88□□□□□ -1.31
SEMA3A-202ENST00000420047 LACRTQ9GZZ8 138 aa6.88□□□□□ -1.31
SEMA3A-202ENST00000420047 KCNK4Q9NYG8 393 aa6.88□□□□□ -1.31
SEMA3A-202ENST00000420047 MYO15BQ96JP2 1530 aa6.87□□□□□ -1.31
SEMA3A-202ENST00000420047 HMX2A2RU54 273 aa6.87□□□□□ -1.31
SEMA3A-202ENST00000420047 KIF4AO95239 1232 aa6.87□□□□□ -1.31
SEMA3A-202ENST00000420047 WNT11O96014 354 aa6.87□□□□□ -1.31
SEMA3A-202ENST00000420047 RFX1P22670 979 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms