RNA–Protein interactions for RNA: ENST00000419671.1

COL12A1-204, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-204ENST00000419671 RIC1Q4ADV7 1423 aa9.84□□□□□ -0.83
COL12A1-204ENST00000419671 IRS4O14654 1257 aaPredicted RBP9.84□□□□□ -0.83
COL12A1-204ENST00000419671 FRAT2O75474 233 aaPredicted RBP9.84□□□□□ -0.83
COL12A1-204ENST00000419671 CTSWP56202 376 aa9.84□□□□□ -0.83
COL12A1-204ENST00000419671 KCNQ4P56696 695 aa9.84□□□□□ -0.83
COL12A1-204ENST00000419671 TIMM10P62072 90 aa9.84□□□□□ -0.83
COL12A1-204ENST00000419671 FAM182BQ5T319 152 aa9.84□□□□□ -0.83
COL12A1-204ENST00000419671 LINC00116Q8NCU8 138 aa9.84□□□□□ -0.83
COL12A1-204ENST00000419671 GJD4Q96KN9 370 aaPredicted RBP9.84□□□□□ -0.83
COL12A1-204ENST00000419671 FAM227BQ96M60 508 aa9.84□□□□□ -0.83
COL12A1-204ENST00000419671 GREM2Q9H772 168 aa9.84□□□□□ -0.83
COL12A1-204ENST00000419671 TRMT112Q9UI30 125 aaKnown RBP9.84□□□□□ -0.83
COL12A1-204ENST00000419671 NDUFB9Q9Y6M9 179 aa9.84□□□□□ -0.83
COL12A1-204ENST00000419671 ATRNO75882 1429 aa9.84□□□□□ -0.83
COL12A1-204ENST00000419671 MCCP23508 829 aa9.84□□□□□ -0.83
COL12A1-204ENST00000419671 IFIT5Q13325 482 aaKnown RBP9.84□□□□□ -0.83
COL12A1-204ENST00000419671 SUSD4Q5VX71 490 aa9.84□□□□□ -0.83
COL12A1-204ENST00000419671 AFF2P51816 1311 aa9.83□□□□□ -0.84
COL12A1-204ENST00000419671 COL24A1Q17RW2 1714 aa9.83□□□□□ -0.84
COL12A1-204ENST00000419671 A0A1B0GUL7 405 aa9.83□□□□□ -0.84
COL12A1-204ENST00000419671 ST18O60284 1047 aa9.83□□□□□ -0.84
COL12A1-204ENST00000419671 PTH1RQ03431 593 aa9.83□□□□□ -0.84
COL12A1-204ENST00000419671 TMEM132AQ24JP5 1023 aa9.83□□□□□ -0.84
COL12A1-204ENST00000419671 RUFY2Q8WXA3 655 aa9.83□□□□□ -0.84
COL12A1-204ENST00000419671 HAUS7Q99871 368 aa9.83□□□□□ -0.84
COL12A1-204ENST00000419671 FSD1Q9BTV5 496 aa9.83□□□□□ -0.84
COL12A1-204ENST00000419671 SNRKQ9NRH2 765 aa9.83□□□□□ -0.84
COL12A1-204ENST00000419671 CHMP5Q9NZZ3 219 aa9.83□□□□□ -0.84
COL12A1-204ENST00000419671 LAMA4Q16363 1823 aa9.83□□□□□ -0.84
COL12A1-204ENST00000419671 COL4A1P02462 1669 aa9.83□□□□□ -0.84
COL12A1-204ENST00000419671 A0A0D9SFI3 127 aa9.82□□□□□ -0.84
COL12A1-204ENST00000419671 PDE8AO60658 829 aa9.82□□□□□ -0.84
COL12A1-204ENST00000419671 ITGA6P23229 1130 aa9.82□□□□□ -0.84
COL12A1-204ENST00000419671 NEK4P51957 841 aa9.82□□□□□ -0.84
COL12A1-204ENST00000419671 NMIQ13287 307 aaPredicted RBP9.82□□□□□ -0.84
COL12A1-204ENST00000419671 MEX3CQ5U5Q3 659 aaKnown RBP9.82□□□□□ -0.84
COL12A1-204ENST00000419671 NEUROD6Q96NK8 337 aa9.82□□□□□ -0.84
COL12A1-204ENST00000419671 RIPOR2Q9Y4F9 1068 aa9.82□□□□□ -0.84
COL12A1-204ENST00000419671 MED23Q9ULK4 1368 aa9.82□□□□□ -0.84
COL12A1-204ENST00000419671 HIP1O00291 1037 aa9.82□□□□□ -0.84
COL12A1-204ENST00000419671 ONECUT3O60422 494 aaPredicted RBP9.82□□□□□ -0.84
COL12A1-204ENST00000419671 CHGBP05060 677 aa9.82□□□□□ -0.84
COL12A1-204ENST00000419671 SNX14Q9Y5W7 946 aa9.82□□□□□ -0.84
COL12A1-204ENST00000419671 CNTNAP4Q9C0A0 1308 aa9.82□□□□□ -0.84
COL12A1-204ENST00000419671 RFX7Q2KHR2 1363 aa9.81□□□□□ -0.84
COL12A1-204ENST00000419671 KIAA1211Q6ZU35 1233 aa9.81□□□□□ -0.84
COL12A1-204ENST00000419671 RASEFQ8IZ41 740 aa9.81□□□□□ -0.84
COL12A1-204ENST00000419671 DNAJC2Q99543 621 aaKnown RBP9.81□□□□□ -0.84
COL12A1-204ENST00000419671 CEP126Q9P2H0 1117 aa9.81□□□□□ -0.84
COL12A1-204ENST00000419671 CCDC171Q6TFL3 1326 aa9.81□□□□□ -0.84
COL12A1-204ENST00000419671 SH3TC1Q8TE82 1336 aa9.81□□□□□ -0.84
COL12A1-204ENST00000419671 ANKRD18BA2A2Z9 1011 aa9.8□□□□□ -0.84
COL12A1-204ENST00000419671 NTSR2O95665 410 aa9.8□□□□□ -0.84
COL12A1-204ENST00000419671 HSP90AA1P07900 732 aaKnown RBP9.8□□□□□ -0.84
COL12A1-204ENST00000419671 NECTIN1Q15223 517 aa9.8□□□□□ -0.84
COL12A1-204ENST00000419671 DCAF8Q5TAQ9 597 aa9.8□□□□□ -0.84
COL12A1-204ENST00000419671 LDHAL6AQ6ZMR3 332 aa9.8□□□□□ -0.84
COL12A1-204ENST00000419671 SMIM5Q71RC9 77 aa9.8□□□□□ -0.84
COL12A1-204ENST00000419671 DDX46Q7L014 1031 aaKnown RBP9.8□□□□□ -0.84
COL12A1-204ENST00000419671 ZNF589Q86UQ0 364 aaPredicted RBP9.8□□□□□ -0.84
COL12A1-204ENST00000419671 VGLL2Q8N8G2 317 aa9.8□□□□□ -0.84
COL12A1-204ENST00000419671 AK7Q96M32 723 aa9.8□□□□□ -0.84
COL12A1-204ENST00000419671 UPF3BQ9BZI7 483 aaKnown RBP9.8□□□□□ -0.84
COL12A1-204ENST00000419671 UBR3Q6ZT12 1888 aa9.8□□□□□ -0.84
COL12A1-204ENST00000419671 FAM177BA6PVY3 158 aa9.8□□□□□ -0.84
COL12A1-204ENST00000419671 HCLS1P14317 486 aaPredicted RBP9.8□□□□□ -0.84
COL12A1-204ENST00000419671 ADORA1P30542 326 aa9.8□□□□□ -0.84
COL12A1-204ENST00000419671 PARP10Q53GL7 1025 aa9.8□□□□□ -0.84
COL12A1-204ENST00000419671 KBTBD3Q8NAB2 608 aa9.8□□□□□ -0.84
COL12A1-204ENST00000419671 MAP4K1Q92918 833 aa9.8□□□□□ -0.84
COL12A1-204ENST00000419671 KCNB2Q92953 911 aa9.8□□□□□ -0.84
COL12A1-204ENST00000419671 XAGE2Q96GT9 111 aa9.8□□□□□ -0.84
COL12A1-204ENST00000419671 UTP14AQ9BVJ6 771 aaKnown RBP9.8□□□□□ -0.84
COL12A1-204ENST00000419671 NIP7Q9Y221 180 aaKnown RBP eCLIP9.8□□□□□ -0.84
COL12A1-204ENST00000419671 AKAP2Q9Y2D5 859 aa9.8□□□□□ -0.84
COL12A1-204ENST00000419671 DOCK2Q92608 1830 aa9.79□□□□□ -0.84
COL12A1-204ENST00000419671 CLEC4GQ6UXB4 293 aa9.79□□□□□ -0.84
COL12A1-204ENST00000419671 PAG1Q9NWQ8 432 aa9.79□□□□□ -0.84
COL12A1-204ENST00000419671 TRPC5Q9UL62 973 aaPredicted RBP9.79□□□□□ -0.84
COL12A1-204ENST00000419671 GOLIM4O00461 696 aa9.78□□□□□ -0.84
COL12A1-204ENST00000419671 IFIT1P09914 478 aaKnown RBP9.78□□□□□ -0.84
COL12A1-204ENST00000419671 MCM2P49736 904 aa9.78□□□□□ -0.84
COL12A1-204ENST00000419671 RAB3GAP1Q15042 981 aa9.78□□□□□ -0.84
COL12A1-204ENST00000419671 METTL24Q5JXM2 366 aa9.78□□□□□ -0.84
COL12A1-204ENST00000419671 RC3H1Q5TC82 1133 aaKnown RBP9.78□□□□□ -0.84
COL12A1-204ENST00000419671 PRPF40BQ6NWY9 871 aaKnown RBP9.78□□□□□ -0.84
COL12A1-204ENST00000419671 AMIGO3Q86WK7 504 aa9.78□□□□□ -0.84
COL12A1-204ENST00000419671 SEPT12Q8IYM1 358 aa9.78□□□□□ -0.84
COL12A1-204ENST00000419671 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.78□□□□□ -0.84
COL12A1-204ENST00000419671 TMX3Q96JJ7 454 aa9.78□□□□□ -0.84
COL12A1-204ENST00000419671 ZNF652Q9Y2D9 606 aa9.78□□□□□ -0.84
COL12A1-204ENST00000419671 RBM8AQ9Y5S9 174 aaKnown RBP9.78□□□□□ -0.84
COL12A1-204ENST00000419671 TAF5LO75529 589 aa9.78□□□□□ -0.84
COL12A1-204ENST00000419671 SCARF1Q14162 830 aa9.78□□□□□ -0.84
COL12A1-204ENST00000419671 ATP2B3Q16720 1220 aa9.78□□□□□ -0.84
COL12A1-204ENST00000419671 ADCK5Q3MIX3 580 aa9.78□□□□□ -0.84
COL12A1-204ENST00000419671 SLFNL1Q499Z3 407 aa9.78□□□□□ -0.84
COL12A1-204ENST00000419671 ZGPATQ8N5A5 531 aaKnown RBP9.78□□□□□ -0.84
COL12A1-204ENST00000419671 TTC14Q96N46 770 aa9.78□□□□□ -0.84
COL12A1-204ENST00000419671 SEC62Q99442 399 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms