RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 PES1O00541 588 aaKnown RBP13.58□□□□□ -0.24
DDR1-232ENST00000418800 FAM193AP78312 1265 aa13.58□□□□□ -0.24
DDR1-232ENST00000418800 ZNF530Q6P9A1 599 aaPredicted RBP13.58□□□□□ -0.24
DDR1-232ENST00000418800 TMEM87AQ8NBN3 555 aa13.58□□□□□ -0.24
DDR1-232ENST00000418800 IL17REQ8NFR9 667 aa13.58□□□□□ -0.24
DDR1-232ENST00000418800 FUCA2Q9BTY2 467 aa13.58□□□□□ -0.24
DDR1-232ENST00000418800 ZSWIM6Q9HCJ5 1215 aa13.58□□□□□ -0.24
DDR1-232ENST00000418800 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.58□□□□□ -0.24
DDR1-232ENST00000418800 KIF1BO60333 1816 aa13.58□□□□□ -0.24
DDR1-232ENST00000418800 QRICH2Q9H0J4 1663 aa13.58□□□□□ -0.24
DDR1-232ENST00000418800 METP08581 1390 aa13.58□□□□□ -0.24
DDR1-232ENST00000418800 PNPLA6Q8IY17 1366 aa13.58□□□□□ -0.24
DDR1-232ENST00000418800 CYP2C19P33261 490 aa13.58□□□□□ -0.24
DDR1-232ENST00000418800 ZNF589Q86UQ0 364 aaPredicted RBP13.57□□□□□ -0.24
DDR1-232ENST00000418800 XPO4Q9C0E2 1151 aaKnown RBP13.57□□□□□ -0.24
DDR1-232ENST00000418800 ZNF446Q9NWS9 450 aa13.57□□□□□ -0.24
DDR1-232ENST00000418800 AMOTL2Q9Y2J4 779 aa13.57□□□□□ -0.24
DDR1-232ENST00000418800 ARHGEF40Q8TER5 1519 aa13.57□□□□□ -0.24
DDR1-232ENST00000418800 NEMFO60524 1076 aa13.57□□□□□ -0.24
DDR1-232ENST00000418800 CCDC82Q8N4S0 544 aa13.57□□□□□ -0.24
DDR1-232ENST00000418800 EAF2Q96CJ1 260 aaPredicted RBP13.57□□□□□ -0.24
DDR1-232ENST00000418800 ZNF396Q96N95 335 aaPredicted RBP13.57□□□□□ -0.24
DDR1-232ENST00000418800 USP28Q96RU2 1077 aa13.57□□□□□ -0.24
DDR1-232ENST00000418800 PUF60Q9UHX1 559 aaKnown RBP13.57□□□□□ -0.24
DDR1-232ENST00000418800 EID1Q9Y6B2 187 aa13.57□□□□□ -0.24
DDR1-232ENST00000418800 NEXNQ0ZGT2 675 aa13.57□□□□□ -0.24
DDR1-232ENST00000418800 KARSQ15046 597 aaKnown RBP13.57□□□□□ -0.24
DDR1-232ENST00000418800 SNRKQ9NRH2 765 aa13.57□□□□□ -0.24
DDR1-232ENST00000418800 LCMT1Q9UIC8 334 aa13.57□□□□□ -0.24
DDR1-232ENST00000418800 HSP90AB3PQ58FF7 597 aa13.56□□□□□ -0.24
DDR1-232ENST00000418800 C1orf141Q5JVX7 400 aa13.56□□□□□ -0.24
DDR1-232ENST00000418800 KIF2AO00139 706 aaPredicted RBP13.56□□□□□ -0.24
DDR1-232ENST00000418800 RPS6KB1P23443 525 aa13.56□□□□□ -0.24
DDR1-232ENST00000418800 ATP5J2-PTCD1G3V325 749 aa13.56□□□□□ -0.24
DDR1-232ENST00000418800 PTCD1O75127 700 aaKnown RBP13.56□□□□□ -0.24
DDR1-232ENST00000418800 SLC3A2P08195 630 aaKnown RBP13.56□□□□□ -0.24
DDR1-232ENST00000418800 FKBP4Q02790 459 aaKnown RBP eCLIP13.56□□□□□ -0.24
DDR1-232ENST00000418800 GJB4Q9NTQ9 266 aa13.55□□□□□ -0.24
DDR1-232ENST00000418800 EFCAB6Q5THR3 1501 aa13.55□□□□□ -0.24
DDR1-232ENST00000418800 SYCP1Q15431 976 aa13.55□□□□□ -0.24
DDR1-232ENST00000418800 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.55□□□□□ -0.24
DDR1-232ENST00000418800 TDRD7Q8NHU6 1098 aaKnown RBP13.55□□□□□ -0.24
DDR1-232ENST00000418800 PTPDC1A2A3K4 754 aa13.55□□□□□ -0.24
DDR1-232ENST00000418800 GOLIM4O00461 696 aa13.55□□□□□ -0.24
DDR1-232ENST00000418800 TTC31Q49AM3 519 aaPredicted RBP13.55□□□□□ -0.24
DDR1-232ENST00000418800 PLA2G4DQ86XP0 818 aa13.55□□□□□ -0.24
DDR1-232ENST00000418800 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.55□□□□□ -0.24
DDR1-232ENST00000418800 KIF24Q5T7B8 1368 aa13.54□□□□□ -0.24
DDR1-232ENST00000418800 RXRAP19793 462 aa13.54□□□□□ -0.24
DDR1-232ENST00000418800 ERC1Q8IUD2 1116 aa13.54□□□□□ -0.24
DDR1-232ENST00000418800 PPP1R13BQ96KQ4 1090 aa13.54□□□□□ -0.24
DDR1-232ENST00000418800 REREQ9P2R6 1566 aa13.54□□□□□ -0.24
DDR1-232ENST00000418800 LMTK2Q8IWU2 1503 aa13.54□□□□□ -0.24
DDR1-232ENST00000418800 PRAMEF22A3QJZ6 481 aa13.54□□□□□ -0.24
DDR1-232ENST00000418800 HIP1O00291 1037 aa13.54□□□□□ -0.24
DDR1-232ENST00000418800 PLA2G4AP47712 749 aa13.54□□□□□ -0.24
DDR1-232ENST00000418800 HDGFP51858 240 aaKnown RBP13.54□□□□□ -0.24
DDR1-232ENST00000418800 GSDMDP57764 484 aa13.54□□□□□ -0.24
DDR1-232ENST00000418800 BICC1Q9H694 974 aaKnown RBP13.54□□□□□ -0.24
DDR1-232ENST00000418800 RRP15Q9Y3B9 282 aaKnown RBP13.54□□□□□ -0.24
DDR1-232ENST00000418800 ABCC3O15438 1527 aa13.54□□□□□ -0.24
DDR1-232ENST00000418800 CASQ1P31415 396 aa13.53□□□□□ -0.24
DDR1-232ENST00000418800 UBASH3AP57075 661 aa13.53□□□□□ -0.24
DDR1-232ENST00000418800 SLC39A6Q13433 755 aa13.53□□□□□ -0.24
DDR1-232ENST00000418800 KLHL10Q6JEL2 608 aa13.53□□□□□ -0.24
DDR1-232ENST00000418800 TOP1P11387 765 aaKnown RBP13.53□□□□□ -0.24
DDR1-232ENST00000418800 DPCR1Q3MIW9 517 aa13.53□□□□□ -0.24
DDR1-232ENST00000418800 ESCO1Q5FWF5 840 aa13.53□□□□□ -0.24
DDR1-232ENST00000418800 CCDC12Q8WUD4 166 aaPredicted RBP13.53□□□□□ -0.24
DDR1-232ENST00000418800 RHOXF2BP0C7M4 288 aa13.53□□□□□ -0.24
DDR1-232ENST00000418800 ST3GAL1Q11201 340 aa13.53□□□□□ -0.24
DDR1-232ENST00000418800 SPECC1Q5M775 1068 aa13.53□□□□□ -0.24
DDR1-232ENST00000418800 WWC2Q6AWC2 1192 aa13.53□□□□□ -0.24
DDR1-232ENST00000418800 MICALL1Q8N3F8 863 aa13.53□□□□□ -0.24
DDR1-232ENST00000418800 LRRC59Q96AG4 307 aaKnown RBP13.53□□□□□ -0.24
DDR1-232ENST00000418800 RHOXF2Q9BQY4 288 aa13.53□□□□□ -0.24
DDR1-232ENST00000418800 KCNA6P17658 529 aa13.52□□□□□ -0.24
DDR1-232ENST00000418800 NECTIN1Q15223 517 aa13.52□□□□□ -0.24
DDR1-232ENST00000418800 PROSER3Q2NL68 480 aa13.52□□□□□ -0.24
DDR1-232ENST00000418800 GDAP1L1Q96MZ0 367 aa13.52□□□□□ -0.24
DDR1-232ENST00000418800 MYD88Q99836 296 aa13.52□□□□□ -0.24
DDR1-232ENST00000418800 FHOD1Q9Y613 1164 aa13.52□□□□□ -0.24
DDR1-232ENST00000418800 KIAA0232Q92628 1395 aa13.52□□□□□ -0.24
DDR1-232ENST00000418800 PPARDQ03181 441 aa13.52□□□□□ -0.25
DDR1-232ENST00000418800 C8orf76Q96K31 380 aa13.52□□□□□ -0.25
DDR1-232ENST00000418800 MNAT1P51948 309 aa13.52□□□□□ -0.25
DDR1-232ENST00000418800 OLFM4Q6UX06 510 aa13.52□□□□□ -0.25
DDR1-232ENST00000418800 MRPS27Q92552 414 aaKnown RBP13.52□□□□□ -0.25
DDR1-232ENST00000418800 LZTFL1Q9NQ48 299 aa13.52□□□□□ -0.25
DDR1-232ENST00000418800 DHX16O60231 1041 aaKnown RBP13.51□□□□□ -0.25
DDR1-232ENST00000418800 DDX58O95786 925 aaKnown RBP13.51□□□□□ -0.25
DDR1-232ENST00000418800 ATP1A3P13637 1013 aa13.51□□□□□ -0.25
DDR1-232ENST00000418800 DHX8Q14562 1220 aaKnown RBP13.51□□□□□ -0.25
DDR1-232ENST00000418800 AXDND1Q5T1B0 1012 aaPredicted RBP13.51□□□□□ -0.25
DDR1-232ENST00000418800 JAKMIP3Q5VZ66 844 aa13.51□□□□□ -0.25
DDR1-232ENST00000418800 SECISBP2LQ93073 1101 aaKnown RBP13.51□□□□□ -0.25
DDR1-232ENST00000418800 GOLPH3LQ9H4A5 285 aa13.51□□□□□ -0.25
DDR1-232ENST00000418800 CAMSAP1Q5T5Y3 1602 aa13.51□□□□□ -0.25
DDR1-232ENST00000418800 H0YHG0 523 aa13.51□□□□□ -0.25
DDR1-232ENST00000418800 UBE3BQ7Z3V4 1068 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms