RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 USPL1Q5W0Q7 1092 aa13.79□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 DHX32Q7L7V1 743 aaKnown RBP13.79□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 FKBP4Q02790 459 aaKnown RBP eCLIP13.78□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 TRIM5Q9C035 493 aa13.78□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 DYNC1I1O14576 645 aa13.78□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 CCDC57Q2TAC2 916 aa13.78□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 PHRF1Q9P1Y6 1649 aaKnown RBP13.78□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 GOLGA6L19H0YKK7 550 aa13.78□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 ZRSR1Q15695 479 aaKnown RBP13.78□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 WASHC4Q2M389 1173 aa13.78□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 CCDC158Q5M9N0 1113 aa13.78□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 HELLSQ9NRZ9 838 aa13.78□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 COL9A3Q14050 684 aaPredicted RBP13.77□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 CCDC73Q6ZRK6 1079 aa13.77□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 ZCRB1Q8TBF4 217 aaKnown RBP13.77□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 ANO6Q4KMQ2 910 aa13.77□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 RFX7Q2KHR2 1363 aa13.77□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 MEGF6O75095 1541 aa13.77□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 CCT2P78371 535 aaKnown RBP13.77□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 TTLL7Q6ZT98 887 aa13.76□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 MTERF4Q7Z6M4 381 aaKnown RBP13.76□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 LUZP1Q86V48 1076 aa13.76□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 LLPHQ9BRT6 129 aaKnown RBP13.76□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 FUCA2Q9BTY2 467 aa13.76□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 TMEM94Q12767 1356 aa13.76□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 EYA2O00167 538 aa13.76□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 TTC39AQ5SRH9 613 aa13.76□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 ZNF396Q96N95 335 aaPredicted RBP13.76□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 A1BGP04217 495 aa13.76□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 CHGBP05060 677 aa13.76□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 ZNF165P49910 485 aa13.76□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 CCDC191Q8NCU4 936 aa13.76□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 PCDH11XQ9BZA7 1347 aa13.75□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 PCDH11YQ9BZA8 1340 aa13.75□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 APOBRQ0VD83 1088 aa13.75□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 PRIMPOLQ96LW4 560 aa13.75□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 DSCC1Q9BVC3 393 aa13.75□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 CLSTN2Q9H4D0 955 aa13.75□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 SH3TC1Q8TE82 1336 aa13.75□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 ZNF609O15014 1411 aa13.75□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 A0A1B0GUL7 405 aa13.75□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 BECN2A8MW95 431 aa13.75□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 H7C1W4 665 aa13.75□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 KINO60870 393 aaKnown RBP13.75□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 CTNNA3Q9UI47 895 aa13.75□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 SCRN1Q12765 414 aa13.75□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 SF3A1Q15459 793 aaKnown RBP13.75□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 ZNF594Q96JF6 807 aaPredicted RBP13.75□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 PTPDC1A2A3K4 754 aa13.74□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 RNF113AO15541 343 aaKnown RBP13.74□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 NR1I2O75469 434 aa13.74□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 EVA1CP58658 441 aa13.74□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 LRP10Q7Z4F1 713 aa13.74□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 C17orf53Q8N3J3 647 aaPredicted RBP13.74□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 GPR108Q9NPR9 543 aa13.74□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 AKAP2Q9Y2D5 859 aa13.74□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 PFKFB2O60825 505 aa13.74□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 ME1P48163 572 aa13.74□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 CCDC85AQ96PX6 553 aaPredicted RBP13.74□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 MRVI1Q9Y6F6 885 aa13.74□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.74□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 CAVIN2O95810 425 aa13.74□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 ARID3AQ99856 593 aa13.74□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 CRYBG1Q9Y4K1 1723 aa13.73□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 NBPF26B4DH59 902 aa13.73□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 CPLX1O14810 134 aa13.73□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 PPFIA3O75145 1194 aa13.73□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 FOXO4P98177 505 aa13.73□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 IMMTQ16891 758 aaKnown RBP13.73□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 LRRC24Q50LG9 513 aa13.73□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 NBPF14Q5TI25 921 aa13.73□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 NBPF10Q6P3W6 841 aaKnown RBP13.73□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 RALYLQ86SE5 291 aaKnown RBP13.73□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 VSIG10Q8N0Z9 540 aa13.73□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 NBPF15Q8N660 670 aa13.73□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 CBX8Q9HC52 389 aa13.73□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 DHX16O60231 1041 aaKnown RBP13.73□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 HSPD1P10809 573 aaKnown RBP13.73□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 GUCY1B3Q02153 619 aa13.73□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 DNAJC25Q9H1X3 360 aa13.73□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 ERVV-2B6SEH9 535 aa13.73□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 CTAGE5O15320 804 aa13.73□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 RESTQ13127 1097 aa13.73□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 ZMYM1Q5SVZ6 1142 aa13.73□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 NAA16Q6N069 864 aaPredicted RBP13.73□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 KIF6Q6ZMV9 814 aa13.73□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 CHST3Q7LGC8 479 aa13.73□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 STRN4Q9NRL3 753 aa13.73□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 COL15A1P39059 1388 aa13.72□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 E7EWF7 191 aa13.72□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 CCAR1Q8IX12 1150 aaKnown RBP13.72□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 CASP7P55210 303 aa13.72□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 SLFNL1Q499Z3 407 aa13.72□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 ATG9AQ7Z3C6 839 aa13.72□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 JCADQ9P266 1359 aa13.72□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 LMTK3Q96Q04 1460 aa13.72□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 NCOA5Q9HCD5 579 aaKnown RBP13.72□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 NSUN7Q8NE18 718 aaKnown RBP13.71□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 SDF4Q9BRK5 362 aa13.71□□□□□ -0.21
CSPG4P3Y-201ENST00000418188 TAOK2Q9UL54 1235 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms