RNA–Protein interactions for RNA: ENST00000415220.6

PRKD1-202, Transcript of protein kinase D1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKD1, Length 3,189 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-202ENST00000415220 CHST3Q7LGC8 479 aa17.38■□□□□ 0.37
PRKD1-202ENST00000415220 SPC24Q8NBT2 197 aa17.37■□□□□ 0.37
PRKD1-202ENST00000415220 SPATA32Q96LK8 384 aa17.37■□□□□ 0.37
PRKD1-202ENST00000415220 FTOQ9C0B1 505 aaKnown RBP eCLIP17.37■□□□□ 0.37
PRKD1-202ENST00000415220 MRVI1Q9Y6F6 885 aa17.37■□□□□ 0.37
PRKD1-202ENST00000415220 RRP9O43818 475 aaKnown RBP17.37■□□□□ 0.37
PRKD1-202ENST00000415220 KBTBD3Q8NAB2 608 aa17.37■□□□□ 0.37
PRKD1-202ENST00000415220 LUZP1Q86V48 1076 aa17.36■□□□□ 0.37
PRKD1-202ENST00000415220 NR1I2O75469 434 aa17.36■□□□□ 0.37
PRKD1-202ENST00000415220 CEBPZQ03701 1054 aaKnown RBP17.36■□□□□ 0.37
PRKD1-202ENST00000415220 RESTQ13127 1097 aa17.36■□□□□ 0.37
PRKD1-202ENST00000415220 CCDC85AQ96PX6 553 aaPredicted RBP17.36■□□□□ 0.37
PRKD1-202ENST00000415220 KCNF1Q9H3M0 494 aa17.36■□□□□ 0.37
PRKD1-202ENST00000415220 PAG1Q9NWQ8 432 aa17.36■□□□□ 0.37
PRKD1-202ENST00000415220 SPATA31A3Q5VYP0 1347 aa17.36■□□□□ 0.37
PRKD1-202ENST00000415220 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.36■□□□□ 0.37
PRKD1-202ENST00000415220 PDCP20941 246 aa17.36■□□□□ 0.37
PRKD1-202ENST00000415220 APOBRQ0VD83 1088 aa17.36■□□□□ 0.37
PRKD1-202ENST00000415220 UBE2Q2Q8WVN8 375 aa17.36■□□□□ 0.37
PRKD1-202ENST00000415220 NUP62CLQ9H1M0 184 aa17.36■□□□□ 0.37
PRKD1-202ENST00000415220 U3KPZ7 1027 aaPredicted RBP17.36■□□□□ 0.37
PRKD1-202ENST00000415220 ELP1O95163 1332 aa17.35■□□□□ 0.37
PRKD1-202ENST00000415220 CTDNEP1O95476 244 aa17.35■□□□□ 0.37
PRKD1-202ENST00000415220 TTLL5Q6EMB2 1281 aa17.35■□□□□ 0.37
PRKD1-202ENST00000415220 NCOA5Q9HCD5 579 aaKnown RBP17.35■□□□□ 0.37
PRKD1-202ENST00000415220 CCT2P78371 535 aaKnown RBP17.34■□□□□ 0.37
PRKD1-202ENST00000415220 TYRO3Q06418 890 aa17.34■□□□□ 0.37
PRKD1-202ENST00000415220 CWC25Q9NXE8 425 aaPredicted RBP17.34■□□□□ 0.37
PRKD1-202ENST00000415220 ABCC6O95255 1503 aa17.34■□□□□ 0.37
PRKD1-202ENST00000415220 KCPQ6ZWJ8 1503 aa17.34■□□□□ 0.37
PRKD1-202ENST00000415220 CCDC192P0DO97 292 aa17.34■□□□□ 0.37
PRKD1-202ENST00000415220 KRT32Q14532 448 aa17.34■□□□□ 0.37
PRKD1-202ENST00000415220 MAP3K11Q16584 847 aa17.34■□□□□ 0.37
PRKD1-202ENST00000415220 HSP90AB3PQ58FF7 597 aa17.34■□□□□ 0.37
PRKD1-202ENST00000415220 FAM13BQ9NYF5 915 aa17.34■□□□□ 0.37
PRKD1-202ENST00000415220 SH3TC1Q8TE82 1336 aa17.33■□□□□ 0.37
PRKD1-202ENST00000415220 M0R2C6 588 aa17.33■□□□□ 0.37
PRKD1-202ENST00000415220 PIBF1Q8WXW3 757 aa17.33■□□□□ 0.37
PRKD1-202ENST00000415220 TSC1Q92574 1164 aa17.33■□□□□ 0.37
PRKD1-202ENST00000415220 GPHNQ9NQX3 736 aaPredicted RBP17.33■□□□□ 0.37
PRKD1-202ENST00000415220 PYCARDQ9ULZ3 195 aa17.33■□□□□ 0.37
PRKD1-202ENST00000415220 ZNF330Q9Y3S2 320 aaPredicted RBP17.33■□□□□ 0.37
PRKD1-202ENST00000415220 TOM1L2Q6ZVM7 507 aa17.33■□□□□ 0.36
PRKD1-202ENST00000415220 UBR2Q8IWV8 1755 aa17.33■□□□□ 0.36
PRKD1-202ENST00000415220 MAST3O60307 1309 aa17.33■□□□□ 0.36
PRKD1-202ENST00000415220 PALLDQ8WX93 1383 aa17.33■□□□□ 0.36
PRKD1-202ENST00000415220 PARP4Q9UKK3 1724 aaKnown RBP17.33■□□□□ 0.36
PRKD1-202ENST00000415220 A0A1B0GUL7 405 aa17.32■□□□□ 0.36
PRKD1-202ENST00000415220 NOLC1Q14978 699 aaKnown RBP eCLIP17.32■□□□□ 0.36
PRKD1-202ENST00000415220 ANO6Q4KMQ2 910 aa17.32■□□□□ 0.36
PRKD1-202ENST00000415220 TNMDQ9H2S6 317 aa17.32■□□□□ 0.36
PRKD1-202ENST00000415220 RFX7Q2KHR2 1363 aa17.32■□□□□ 0.36
PRKD1-202ENST00000415220 ADORA1P30542 326 aa17.32■□□□□ 0.36
PRKD1-202ENST00000415220 NSUN7Q8NE18 718 aaKnown RBP17.32■□□□□ 0.36
PRKD1-202ENST00000415220 ZCRB1Q8TBF4 217 aaKnown RBP17.32■□□□□ 0.36
PRKD1-202ENST00000415220 A0A087WWV3 80 aa17.32■□□□□ 0.36
PRKD1-202ENST00000415220 HSPD1P10809 573 aaKnown RBP17.32■□□□□ 0.36
PRKD1-202ENST00000415220 TERF1P54274 439 aa17.32■□□□□ 0.36
PRKD1-202ENST00000415220 FGD1P98174 961 aa17.32■□□□□ 0.36
PRKD1-202ENST00000415220 SCAND2PQ9GZW5 306 aaPredicted RBP17.32■□□□□ 0.36
PRKD1-202ENST00000415220 GUCY1B3Q02153 619 aa17.31■□□□□ 0.36
PRKD1-202ENST00000415220 ZMYM1Q5SVZ6 1142 aa17.31■□□□□ 0.36
PRKD1-202ENST00000415220 NAP1L2Q9ULW6 460 aaPredicted RBP17.31■□□□□ 0.36
PRKD1-202ENST00000415220 H3BQV1 296 aa17.31■□□□□ 0.36
PRKD1-202ENST00000415220 EYA2O00167 538 aa17.31■□□□□ 0.36
PRKD1-202ENST00000415220 ADD1P35611 737 aaKnown RBP17.31■□□□□ 0.36
PRKD1-202ENST00000415220 DNTTIP2Q5QJE6 756 aaKnown RBP17.31■□□□□ 0.36
PRKD1-202ENST00000415220 IFFO2Q5TF58 517 aa17.31■□□□□ 0.36
PRKD1-202ENST00000415220 SASS6Q6UVJ0 657 aa17.31■□□□□ 0.36
PRKD1-202ENST00000415220 BICD2Q8TD16 824 aa17.31■□□□□ 0.36
PRKD1-202ENST00000415220 CBX8Q9HC52 389 aa17.31■□□□□ 0.36
PRKD1-202ENST00000415220 GOLGA6L4A6NEF3 574 aa17.3■□□□□ 0.36
PRKD1-202ENST00000415220 E7EWF7 191 aa17.3■□□□□ 0.36
PRKD1-202ENST00000415220 IFIT1P09914 478 aaKnown RBP17.3■□□□□ 0.36
PRKD1-202ENST00000415220 SYNE4Q8N205 404 aa17.3■□□□□ 0.36
PRKD1-202ENST00000415220 SMARCC2Q8TAQ2 1214 aa17.3■□□□□ 0.36
PRKD1-202ENST00000415220 CPDO75976 1380 aa17.3■□□□□ 0.36
PRKD1-202ENST00000415220 FOXP2O15409 715 aa17.3■□□□□ 0.36
PRKD1-202ENST00000415220 EXOSC10Q01780 885 aaKnown RBP17.3■□□□□ 0.36
PRKD1-202ENST00000415220 SCARF1Q14162 830 aa17.3■□□□□ 0.36
PRKD1-202ENST00000415220 DHX32Q7L7V1 743 aaKnown RBP17.3■□□□□ 0.36
PRKD1-202ENST00000415220 FAM200AQ8TCP9 573 aa17.3■□□□□ 0.36
PRKD1-202ENST00000415220 PTPDC1A2A3K4 754 aa17.3■□□□□ 0.36
PRKD1-202ENST00000415220 PFKFB2O60825 505 aa17.3■□□□□ 0.36
PRKD1-202ENST00000415220 HSPA2P54652 639 aa17.3■□□□□ 0.36
PRKD1-202ENST00000415220 PI16Q6UXB8 463 aa17.3■□□□□ 0.36
PRKD1-202ENST00000415220 OSBP2Q969R2 916 aa17.3■□□□□ 0.36
PRKD1-202ENST00000415220 CLSTN2Q9H4D0 955 aa17.3■□□□□ 0.36
PRKD1-202ENST00000415220 PRDM11Q9NQV5 511 aa17.3■□□□□ 0.36
PRKD1-202ENST00000415220 PCDH11XQ9BZA7 1347 aa17.29■□□□□ 0.36
PRKD1-202ENST00000415220 PCDH11YQ9BZA8 1340 aa17.29■□□□□ 0.36
PRKD1-202ENST00000415220 FAM177BA6PVY3 158 aa17.29■□□□□ 0.36
PRKD1-202ENST00000415220 FKBP4Q02790 459 aaKnown RBP eCLIP17.29■□□□□ 0.36
PRKD1-202ENST00000415220 ARID3AQ99856 593 aa17.29■□□□□ 0.36
PRKD1-202ENST00000415220 SHANK3Q9BYB0 1731 aa17.29■□□□□ 0.36
PRKD1-202ENST00000415220 NWD2Q9ULI1 1742 aa17.29■□□□□ 0.36
PRKD1-202ENST00000415220 MYH15Q9Y2K3 1946 aa17.29■□□□□ 0.36
PRKD1-202ENST00000415220 WDR17Q8IZU2 1322 aa17.29■□□□□ 0.36
PRKD1-202ENST00000415220 IL15P40933 162 aaPredicted RBP17.29■□□□□ 0.36
PRKD1-202ENST00000415220 HAND2P61296 217 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms