RNA–Protein interactions for RNA: ENST00000414822.7

CDKN1C-202, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDKN1C, Length 2,051 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-202ENST00000414822 DDX60Q8IY21 1712 aaKnown RBP26.4■■□□□ 1.82
CDKN1C-202ENST00000414822 CCDC171Q6TFL3 1326 aa26.39■■□□□ 1.82
CDKN1C-202ENST00000414822 RFX7Q2KHR2 1363 aa26.39■■□□□ 1.82
CDKN1C-202ENST00000414822 VGLL2Q8N8G2 317 aa26.39■■□□□ 1.82
CDKN1C-202ENST00000414822 KBTBD3Q8NAB2 608 aa26.39■■□□□ 1.82
CDKN1C-202ENST00000414822 ARHGEF1Q92888 912 aaKnown RBP26.39■■□□□ 1.82
CDKN1C-202ENST00000414822 PHF14O94880 888 aa26.38■■□□□ 1.81
CDKN1C-202ENST00000414822 NFKBIBQ15653 356 aa26.38■■□□□ 1.81
CDKN1C-202ENST00000414822 MPHOSPH8Q99549 860 aa26.38■■□□□ 1.81
CDKN1C-202ENST00000414822 SNRKQ9NRH2 765 aa26.38■■□□□ 1.81
CDKN1C-202ENST00000414822 LRRC4BQ9NT99 713 aa26.38■■□□□ 1.81
CDKN1C-202ENST00000414822 FOXD4L1Q9NU39 408 aa26.38■■□□□ 1.81
CDKN1C-202ENST00000414822 PDE8BO95263 885 aa26.38■■□□□ 1.81
CDKN1C-202ENST00000414822 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.38■■□□□ 1.81
CDKN1C-202ENST00000414822 LRP5O75197 1615 aa26.38■■□□□ 1.81
CDKN1C-202ENST00000414822 TAF1LQ8IZX4 1826 aa26.37■■□□□ 1.81
CDKN1C-202ENST00000414822 GTF2E1P29083 439 aaPredicted RBP26.37■■□□□ 1.81
CDKN1C-202ENST00000414822 SNX14Q9Y5W7 946 aa26.37■■□□□ 1.81
CDKN1C-202ENST00000414822 MED23Q9ULK4 1368 aa26.37■■□□□ 1.81
CDKN1C-202ENST00000414822 TRIM37O94972 964 aa26.37■■□□□ 1.81
CDKN1C-202ENST00000414822 SETDB2Q96T68 719 aa26.37■■□□□ 1.81
CDKN1C-202ENST00000414822 CHMP5Q9NZZ3 219 aa26.37■■□□□ 1.81
CDKN1C-202ENST00000414822 MROH5Q6ZUA9 1318 aa26.36■■□□□ 1.81
CDKN1C-202ENST00000414822 C4BP0C0L5 1744 aa26.36■■□□□ 1.81
CDKN1C-202ENST00000414822 CHGBP05060 677 aa26.36■■□□□ 1.81
CDKN1C-202ENST00000414822 ZNF589Q86UQ0 364 aaPredicted RBP26.36■■□□□ 1.81
CDKN1C-202ENST00000414822 HELBQ8NG08 1087 aaPredicted RBP26.36■■□□□ 1.81
CDKN1C-202ENST00000414822 UPF3BQ9BZI7 483 aaKnown RBP26.36■■□□□ 1.81
CDKN1C-202ENST00000414822 LAMB2P55268 1798 aa26.36■■□□□ 1.81
CDKN1C-202ENST00000414822 RTL9Q8NET4 1388 aa26.36■■□□□ 1.81
CDKN1C-202ENST00000414822 FKBP4Q02790 459 aaKnown RBP eCLIP26.35■■□□□ 1.81
CDKN1C-202ENST00000414822 RASEFQ8IZ41 740 aa26.35■■□□□ 1.81
CDKN1C-202ENST00000414822 BRWD3Q6RI45 1802 aa26.35■■□□□ 1.81
CDKN1C-202ENST00000414822 RFC4P35249 363 aa26.35■■□□□ 1.81
CDKN1C-202ENST00000414822 IGHMBP2P38935 993 aaKnown RBP26.35■■□□□ 1.81
CDKN1C-202ENST00000414822 KCNJ4P48050 445 aa26.35■■□□□ 1.81
CDKN1C-202ENST00000414822 TRAPPC3LQ5T215 181 aa26.35■■□□□ 1.81
CDKN1C-202ENST00000414822 ZNF772Q68DY9 489 aaPredicted RBP26.35■■□□□ 1.81
CDKN1C-202ENST00000414822 PRPF40BQ6NWY9 871 aaKnown RBP26.34■■□□□ 1.81
CDKN1C-202ENST00000414822 RBM6P78332 1123 aaKnown RBP26.34■■□□□ 1.81
CDKN1C-202ENST00000414822 PUM3Q15397 648 aaKnown RBP26.34■■□□□ 1.81
CDKN1C-202ENST00000414822 C3orf67Q6ZVT6 689 aa26.34■■□□□ 1.81
CDKN1C-202ENST00000414822 MAP4K1Q92918 833 aa26.34■■□□□ 1.81
CDKN1C-202ENST00000414822 NYXQ9GZU5 481 aa26.34■■□□□ 1.81
CDKN1C-202ENST00000414822 RBM8AQ9Y5S9 174 aaKnown RBP26.34■■□□□ 1.81
CDKN1C-202ENST00000414822 NBPF5PQ86XG9 351 aaPredicted RBP26.33■■□□□ 1.81
CDKN1C-202ENST00000414822 DDIT3P35638 169 aa26.32■■□□□ 1.8
CDKN1C-202ENST00000414822 SCARF1Q14162 830 aa26.32■■□□□ 1.8
CDKN1C-202ENST00000414822 ABCC12Q96J65 1359 aa26.32■■□□□ 1.8
CDKN1C-202ENST00000414822 SEC62Q99442 399 aaKnown RBP26.32■■□□□ 1.8
CDKN1C-202ENST00000414822 NECTIN1Q15223 517 aa26.31■■□□□ 1.8
CDKN1C-202ENST00000414822 MCMDC2Q4G0Z9 681 aa26.31■■□□□ 1.8
CDKN1C-202ENST00000414822 LPIN2Q92539 896 aa26.31■■□□□ 1.8
CDKN1C-202ENST00000414822 CDC5LQ99459 802 aaKnown RBP26.31■■□□□ 1.8
CDKN1C-202ENST00000414822 TAF5LO75529 589 aa26.3■■□□□ 1.8
CDKN1C-202ENST00000414822 SF3B3Q15393 1217 aaKnown RBP26.3■■□□□ 1.8
CDKN1C-202ENST00000414822 FRAT2O75474 233 aaPredicted RBP26.3■■□□□ 1.8
CDKN1C-202ENST00000414822 MCM2P49736 904 aa26.3■■□□□ 1.8
CDKN1C-202ENST00000414822 SLC27A3Q5K4L6 730 aa26.3■■□□□ 1.8
CDKN1C-202ENST00000414822 SLC10A5Q5PT55 438 aa26.3■■□□□ 1.8
CDKN1C-202ENST00000414822 CCDC129Q6ZRS4 1044 aa26.3■■□□□ 1.8
CDKN1C-202ENST00000414822 FGFR2P21802 821 aa26.29■■□□□ 1.8
CDKN1C-202ENST00000414822 ZAP70P43403 619 aa26.29■■□□□ 1.8
CDKN1C-202ENST00000414822 SLFNL1Q499Z3 407 aa26.29■■□□□ 1.8
CDKN1C-202ENST00000414822 PI16Q6UXB8 463 aa26.29■■□□□ 1.8
CDKN1C-202ENST00000414822 CREB3L3Q68CJ9 461 aa26.29■■□□□ 1.8
CDKN1C-202ENST00000414822 NOL8Q76FK4 1167 aaKnown RBP26.29■■□□□ 1.8
CDKN1C-202ENST00000414822 TICAM2Q86XR7 235 aa26.29■■□□□ 1.8
CDKN1C-202ENST00000414822 SPEF2Q9C093 1822 aa26.28■■□□□ 1.8
CDKN1C-202ENST00000414822 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.28■■□□□ 1.8
CDKN1C-202ENST00000414822 SLC5A1P13866 664 aa26.28■■□□□ 1.8
CDKN1C-202ENST00000414822 ZKSCAN1P17029 563 aaPredicted RBP26.28■■□□□ 1.8
CDKN1C-202ENST00000414822 TPTE2Q6XPS3 522 aa26.28■■□□□ 1.8
CDKN1C-202ENST00000414822 KCNB2Q92953 911 aa26.28■■□□□ 1.8
CDKN1C-202ENST00000414822 SNAP23O00161 211 aa26.27■■□□□ 1.8
CDKN1C-202ENST00000414822 MCAMP43121 646 aa26.27■■□□□ 1.8
CDKN1C-202ENST00000414822 CCDC102BQ68D86 513 aa26.27■■□□□ 1.8
CDKN1C-202ENST00000414822 C4AP0C0L4 1744 aa26.27■■□□□ 1.8
CDKN1C-202ENST00000414822 RNF113AO15541 343 aaKnown RBP26.27■■□□□ 1.8
CDKN1C-202ENST00000414822 ADRA2BP18089 450 aa26.27■■□□□ 1.8
CDKN1C-202ENST00000414822 PHKA1P46020 1223 aa26.27■■□□□ 1.8
CDKN1C-202ENST00000414822 ZMYM1Q5SVZ6 1142 aa26.27■■□□□ 1.8
CDKN1C-202ENST00000414822 ANKRD18AQ8IVF6 992 aa26.27■■□□□ 1.8
CDKN1C-202ENST00000414822 CCDC24Q8N4L8 307 aa26.27■■□□□ 1.8
CDKN1C-202ENST00000414822 ZNF512BQ96KM6 892 aaPredicted RBP26.27■■□□□ 1.8
CDKN1C-202ENST00000414822 HELLSQ9NRZ9 838 aa26.27■■□□□ 1.8
CDKN1C-202ENST00000414822 CIZ1Q9ULV3 898 aaPredicted RBP26.27■■□□□ 1.8
CDKN1C-202ENST00000414822 CHRNDQ07001 517 aa26.26■■□□□ 1.79
CDKN1C-202ENST00000414822 TMX3Q96JJ7 454 aa26.26■■□□□ 1.79
CDKN1C-202ENST00000414822 JAKMIP1Q96N16 626 aaKnown RBP26.26■■□□□ 1.79
CDKN1C-202ENST00000414822 COL24A1Q17RW2 1714 aa26.26■■□□□ 1.79
CDKN1C-202ENST00000414822 SLC27A2O14975 620 aa26.26■■□□□ 1.79
CDKN1C-202ENST00000414822 CASTP20810 708 aaKnown RBP26.26■■□□□ 1.79
CDKN1C-202ENST00000414822 ADCK5Q3MIX3 580 aa26.26■■□□□ 1.79
CDKN1C-202ENST00000414822 NLRP3Q96P20 1036 aa26.26■■□□□ 1.79
CDKN1C-202ENST00000414822 COL4A1P02462 1669 aa26.25■■□□□ 1.79
CDKN1C-202ENST00000414822 NPHP1O15259 732 aa26.25■■□□□ 1.79
CDKN1C-202ENST00000414822 SSFA2P28290 1259 aa26.25■■□□□ 1.79
CDKN1C-202ENST00000414822 LRRFIP1Q32MZ4 808 aaKnown RBP26.25■■□□□ 1.79
CDKN1C-202ENST00000414822 RNF20Q5VTR2 975 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms