RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 CGNQ9P2M7 1197 aaKnown RBP17.14■□□□□ 0.33
SEMA3F-202ENST00000413852 ME1P48163 572 aa17.14■□□□□ 0.33
SEMA3F-202ENST00000413852 XAGE3Q8WTP9 111 aa17.14■□□□□ 0.33
SEMA3F-202ENST00000413852 GORABQ5T7V8 394 aa17.13■□□□□ 0.33
SEMA3F-202ENST00000413852 IP6K1Q92551 441 aa17.13■□□□□ 0.33
SEMA3F-202ENST00000413852 ZNF609O15014 1411 aa17.13■□□□□ 0.33
SEMA3F-202ENST00000413852 GOLGA8FQ08AF8 430 aa17.13■□□□□ 0.33
SEMA3F-202ENST00000413852 GOLGA8DPQ0D2H9 430 aa17.13■□□□□ 0.33
SEMA3F-202ENST00000413852 SNW1Q13573 536 aaKnown RBP17.13■□□□□ 0.33
SEMA3F-202ENST00000413852 C1orf141Q5JVX7 400 aa17.13■□□□□ 0.33
SEMA3F-202ENST00000413852 TTLL5Q6EMB2 1281 aa17.13■□□□□ 0.33
SEMA3F-202ENST00000413852 COPS6Q7L5N1 327 aa17.13■□□□□ 0.33
SEMA3F-202ENST00000413852 ERICH4A6NGS2 130 aa17.13■□□□□ 0.33
SEMA3F-202ENST00000413852 PDIA6Q15084 440 aa17.13■□□□□ 0.33
SEMA3F-202ENST00000413852 ANKRD1Q15327 319 aa17.13■□□□□ 0.33
SEMA3F-202ENST00000413852 PTPN14Q15678 1187 aa17.13■□□□□ 0.33
SEMA3F-202ENST00000413852 HSP90AB3PQ58FF7 597 aa17.13■□□□□ 0.33
SEMA3F-202ENST00000413852 FSIP1Q8NA03 581 aa17.13■□□□□ 0.33
SEMA3F-202ENST00000413852 LINS1Q8NG48 757 aa17.13■□□□□ 0.33
SEMA3F-202ENST00000413852 PTPDC1A2A3K4 754 aa17.12■□□□□ 0.33
SEMA3F-202ENST00000413852 ALDH1L1O75891 902 aa17.12■□□□□ 0.33
SEMA3F-202ENST00000413852 POLR3DP05423 398 aaPredicted RBP17.12■□□□□ 0.33
SEMA3F-202ENST00000413852 CCZ1BP86790 482 aa17.12■□□□□ 0.33
SEMA3F-202ENST00000413852 CCZ1P86791 482 aaPredicted RBP17.12■□□□□ 0.33
SEMA3F-202ENST00000413852 FBXO38Q6PIJ6 1188 aa17.12■□□□□ 0.33
SEMA3F-202ENST00000413852 OGFRQ9NZT2 677 aa17.12■□□□□ 0.33
SEMA3F-202ENST00000413852 AKAP4Q5JQC9 854 aa17.12■□□□□ 0.33
SEMA3F-202ENST00000413852 UBE3BQ7Z3V4 1068 aa17.12■□□□□ 0.33
SEMA3F-202ENST00000413852 ILDR1Q86SU0 546 aaPredicted RBP17.12■□□□□ 0.33
SEMA3F-202ENST00000413852 KIF18AQ8NI77 898 aa17.12■□□□□ 0.33
SEMA3F-202ENST00000413852 NSUN7Q8NE18 718 aaKnown RBP17.11■□□□□ 0.33
SEMA3F-202ENST00000413852 NEUROD6Q96NK8 337 aa17.11■□□□□ 0.33
SEMA3F-202ENST00000413852 BABAM1Q9NWV8 329 aa17.11■□□□□ 0.33
SEMA3F-202ENST00000413852 PODXL2Q9NZ53 605 aa17.11■□□□□ 0.33
SEMA3F-202ENST00000413852 PLEKHG1Q9ULL1 1385 aa17.11■□□□□ 0.33
SEMA3F-202ENST00000413852 ESCO1Q5FWF5 840 aa17.11■□□□□ 0.33
SEMA3F-202ENST00000413852 AXIN2Q9Y2T1 843 aa17.11■□□□□ 0.33
SEMA3F-202ENST00000413852 DIP2AQ14689 1571 aa17.11■□□□□ 0.33
SEMA3F-202ENST00000413852 CRYBG1Q9Y4K1 1723 aa17.11■□□□□ 0.33
SEMA3F-202ENST00000413852 TIMM10P62072 90 aa17.11■□□□□ 0.33
SEMA3F-202ENST00000413852 TMX1Q9H3N1 280 aa17.11■□□□□ 0.33
SEMA3F-202ENST00000413852 DDX41Q9UJV9 622 aaKnown RBP17.11■□□□□ 0.33
SEMA3F-202ENST00000413852 GOLIM4O00461 696 aa17.1■□□□□ 0.33
SEMA3F-202ENST00000413852 AGLP35573 1532 aa17.1■□□□□ 0.33
SEMA3F-202ENST00000413852 ERBB3P21860 1342 aa17.1■□□□□ 0.33
SEMA3F-202ENST00000413852 HAND2P61296 217 aa17.1■□□□□ 0.33
SEMA3F-202ENST00000413852 DPCR1Q3MIW9 517 aa17.1■□□□□ 0.33
SEMA3F-202ENST00000413852 NEURL1BA8MQ27 555 aa17.09■□□□□ 0.33
SEMA3F-202ENST00000413852 HIP1O00291 1037 aa17.09■□□□□ 0.33
SEMA3F-202ENST00000413852 PSME1Q06323 249 aa17.09■□□□□ 0.33
SEMA3F-202ENST00000413852 PLEKHO1Q53GL0 409 aaPredicted RBP17.09■□□□□ 0.33
SEMA3F-202ENST00000413852 TNNI3KQ59H18 835 aa17.09■□□□□ 0.33
SEMA3F-202ENST00000413852 NBPF11Q86T75 865 aa17.09■□□□□ 0.33
SEMA3F-202ENST00000413852 PHF8Q9UPP1 1060 aa17.09■□□□□ 0.33
SEMA3F-202ENST00000413852 FPGT-TNNI3KV9GXZ4 949 aa17.09■□□□□ 0.33
SEMA3F-202ENST00000413852 SMC2O95347 1197 aa17.09■□□□□ 0.33
SEMA3F-202ENST00000413852 HSP90AA4PQ58FG1 418 aa17.09■□□□□ 0.33
SEMA3F-202ENST00000413852 MAPK8IP2Q13387 824 aaPredicted RBP17.09■□□□□ 0.33
SEMA3F-202ENST00000413852 STX1AQ16623 288 aa17.09■□□□□ 0.33
SEMA3F-202ENST00000413852 ERCC6LQ2NKX8 1250 aa17.09■□□□□ 0.33
SEMA3F-202ENST00000413852 SDF4Q9BRK5 362 aa17.09■□□□□ 0.33
SEMA3F-202ENST00000413852 RGPD2P0DJD1 1756 aa17.08■□□□□ 0.33
SEMA3F-202ENST00000413852 KINO60870 393 aaKnown RBP17.08■□□□□ 0.33
SEMA3F-202ENST00000413852 SLFN14P0C7P3 912 aa17.08■□□□□ 0.33
SEMA3F-202ENST00000413852 NDUFA8P51970 172 aa17.08■□□□□ 0.33
SEMA3F-202ENST00000413852 GCKRQ14397 625 aa17.08■□□□□ 0.33
SEMA3F-202ENST00000413852 CCDC73Q6ZRK6 1079 aa17.08■□□□□ 0.33
SEMA3F-202ENST00000413852 CLIC4Q9Y696 253 aa17.08■□□□□ 0.33
SEMA3F-202ENST00000413852 UBR1Q8IWV7 1749 aa17.08■□□□□ 0.33
SEMA3F-202ENST00000413852 CACNA1FO60840 1977 aa17.08■□□□□ 0.33
SEMA3F-202ENST00000413852 PTPN12Q05209 780 aaKnown RBP17.08■□□□□ 0.32
SEMA3F-202ENST00000413852 SYT10Q6XYQ8 523 aa17.08■□□□□ 0.32
SEMA3F-202ENST00000413852 TMC6Q7Z403 805 aa17.08■□□□□ 0.32
SEMA3F-202ENST00000413852 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.08■□□□□ 0.32
SEMA3F-202ENST00000413852 TRERF1Q96PN7 1200 aa17.08■□□□□ 0.32
SEMA3F-202ENST00000413852 EPC1Q9H2F5 836 aa17.08■□□□□ 0.32
SEMA3F-202ENST00000413852 ZNF446Q9NWS9 450 aa17.08■□□□□ 0.32
SEMA3F-202ENST00000413852 PCDHA7Q9UN72 937 aa17.08■□□□□ 0.32
SEMA3F-202ENST00000413852 PAXBP1Q9Y5B6 917 aa17.08■□□□□ 0.32
SEMA3F-202ENST00000413852 NYAP1Q6ZVC0 841 aa17.08■□□□□ 0.32
SEMA3F-202ENST00000413852 CCAR2Q8N163 923 aaKnown RBP17.08■□□□□ 0.32
SEMA3F-202ENST00000413852 NFATC2IPQ8NCF5 419 aa17.08■□□□□ 0.32
SEMA3F-202ENST00000413852 IFNKQ9P0W0 207 aa17.08■□□□□ 0.32
SEMA3F-202ENST00000413852 CFAP45Q9UL16 551 aa17.08■□□□□ 0.32
SEMA3F-202ENST00000413852 HOXB7P09629 217 aa17.07■□□□□ 0.32
SEMA3F-202ENST00000413852 RBM6P78332 1123 aaKnown RBP17.07■□□□□ 0.32
SEMA3F-202ENST00000413852 STK11IPQ8N1F8 1099 aa17.07■□□□□ 0.32
SEMA3F-202ENST00000413852 FEZ1Q99689 392 aa17.07■□□□□ 0.32
SEMA3F-202ENST00000413852 XPO4Q9C0E2 1151 aaKnown RBP17.07■□□□□ 0.32
SEMA3F-202ENST00000413852 SNRKQ9NRH2 765 aa17.07■□□□□ 0.32
SEMA3F-202ENST00000413852 USPL1Q5W0Q7 1092 aa17.06■□□□□ 0.32
SEMA3F-202ENST00000413852 ZNF594Q96JF6 807 aaPredicted RBP17.06■□□□□ 0.32
SEMA3F-202ENST00000413852 MCMDC2Q4G0Z9 681 aa17.06■□□□□ 0.32
SEMA3F-202ENST00000413852 FAM177A1Q8N128 213 aaPredicted RBP17.06■□□□□ 0.32
SEMA3F-202ENST00000413852 ENGASEQ8NFI3 743 aa17.06■□□□□ 0.32
SEMA3F-202ENST00000413852 ANKRD24Q8TF21 1146 aa17.06■□□□□ 0.32
SEMA3F-202ENST00000413852 DDX21Q9NR30 783 aaKnown RBP eCLIP17.06■□□□□ 0.32
SEMA3F-202ENST00000413852 RCOR1Q9UKL0 485 aa17.06■□□□□ 0.32
SEMA3F-202ENST00000413852 ZC3H6P61129 1189 aaKnown RBP17.06■□□□□ 0.32
SEMA3F-202ENST00000413852 E4F1Q66K89 784 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms