RNA–Protein interactions for RNA: ENST00000413509.6

HDAC9-207, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-207ENST00000413509 CNTROBQ8N137 903 aa10.06□□□□□ -0.8
HDAC9-207ENST00000413509 EVI5LQ96CN4 794 aa10.06□□□□□ -0.8
HDAC9-207ENST00000413509 ZNF512BQ96KM6 892 aaPredicted RBP10.06□□□□□ -0.8
HDAC9-207ENST00000413509 CDC5LQ99459 802 aaKnown RBP10.06□□□□□ -0.8
HDAC9-207ENST00000413509 ESYT1Q9BSJ8 1104 aa10.06□□□□□ -0.8
HDAC9-207ENST00000413509 UPF2Q9HAU5 1272 aaKnown RBP10.06□□□□□ -0.8
HDAC9-207ENST00000413509 SNRKQ9NRH2 765 aa10.06□□□□□ -0.8
HDAC9-207ENST00000413509 TAF1P21675 1872 aa10.06□□□□□ -0.8
HDAC9-207ENST00000413509 ANKRD31Q8N7Z5 1873 aa10.06□□□□□ -0.8
HDAC9-207ENST00000413509 PNPLA7Q6ZV29 1317 aa10.06□□□□□ -0.8
HDAC9-207ENST00000413509 KLRG2A4D1S0 409 aaPredicted RBP10.05□□□□□ -0.8
HDAC9-207ENST00000413509 POLRMTO00411 1230 aaKnown RBP10.05□□□□□ -0.8
HDAC9-207ENST00000413509 PDE8BO95263 885 aa10.05□□□□□ -0.8
HDAC9-207ENST00000413509 MFAP1P55081 439 aaKnown RBP10.05□□□□□ -0.8
HDAC9-207ENST00000413509 TIMM10P62072 90 aa10.05□□□□□ -0.8
HDAC9-207ENST00000413509 ATP2B3Q16720 1220 aa10.05□□□□□ -0.8
HDAC9-207ENST00000413509 CRY2Q49AN0 593 aa10.05□□□□□ -0.8
HDAC9-207ENST00000413509 METTL24Q5JXM2 366 aa10.05□□□□□ -0.8
HDAC9-207ENST00000413509 PRR5LQ6MZQ0 368 aa10.05□□□□□ -0.8
HDAC9-207ENST00000413509 COL23A1Q86Y22 540 aaPredicted RBP10.05□□□□□ -0.8
HDAC9-207ENST00000413509 IL17RAQ96F46 866 aa10.05□□□□□ -0.8
HDAC9-207ENST00000413509 C22orf23Q9BZE7 217 aa10.05□□□□□ -0.8
HDAC9-207ENST00000413509 BCL11AQ9H165 835 aa10.05□□□□□ -0.8
HDAC9-207ENST00000413509 CNNM1Q9NRU3 951 aa10.05□□□□□ -0.8
HDAC9-207ENST00000413509 BSDC1Q9NW68 430 aaPredicted RBP10.05□□□□□ -0.8
HDAC9-207ENST00000413509 TRIM6-TRIM34B2RNG4 842 aa10.04□□□□□ -0.8
HDAC9-207ENST00000413509 ZBTB22O15209 634 aa10.04□□□□□ -0.8
HDAC9-207ENST00000413509 ADORA1P30542 326 aa10.04□□□□□ -0.8
HDAC9-207ENST00000413509 IGHMBP2P38935 993 aaKnown RBP10.04□□□□□ -0.8
HDAC9-207ENST00000413509 PUM3Q15397 648 aaKnown RBP10.04□□□□□ -0.8
HDAC9-207ENST00000413509 CNBD1Q8NA66 436 aa10.04□□□□□ -0.8
HDAC9-207ENST00000413509 UPF1Q92900 1129 aaKnown RBP eCLIP10.04□□□□□ -0.8
HDAC9-207ENST00000413509 RILPL2Q969X0 211 aa10.04□□□□□ -0.8
HDAC9-207ENST00000413509 XAGE2Q96GT9 111 aa10.04□□□□□ -0.8
HDAC9-207ENST00000413509 NLRP3Q96P20 1036 aa10.04□□□□□ -0.8
HDAC9-207ENST00000413509 IPO9Q96P70 1041 aaKnown RBP10.04□□□□□ -0.8
HDAC9-207ENST00000413509 USP26Q9BXU7 913 aa10.04□□□□□ -0.8
HDAC9-207ENST00000413509 ANO8Q9HCE9 1232 aaPredicted RBP10.04□□□□□ -0.8
HDAC9-207ENST00000413509 TFCP2L1Q9NZI6 479 aa10.04□□□□□ -0.8
HDAC9-207ENST00000413509 LRRC37AA6NMS7 1700 aa10.04□□□□□ -0.8
HDAC9-207ENST00000413509 HIP1O00291 1037 aa10.03□□□□□ -0.8
HDAC9-207ENST00000413509 SGSM2O43147 1006 aa10.03□□□□□ -0.8
HDAC9-207ENST00000413509 REC8O95072 547 aa10.03□□□□□ -0.8
HDAC9-207ENST00000413509 MAP4K4O95819 1239 aaPredicted RBP10.03□□□□□ -0.8
HDAC9-207ENST00000413509 SERPINB2P05120 415 aa10.03□□□□□ -0.8
HDAC9-207ENST00000413509 ARID4AP29374 1257 aaPredicted RBP10.03□□□□□ -0.8
HDAC9-207ENST00000413509 ANKRD18AQ8IVF6 992 aa10.03□□□□□ -0.8
HDAC9-207ENST00000413509 NLGN1Q8N2Q7 840 aa10.03□□□□□ -0.8
HDAC9-207ENST00000413509 LPIN2Q92539 896 aa10.03□□□□□ -0.8
HDAC9-207ENST00000413509 KIF2CQ99661 725 aa10.03□□□□□ -0.8
HDAC9-207ENST00000413509 BOLA2Q9H3K6 86 aa10.03□□□□□ -0.8
HDAC9-207ENST00000413509 RAD50Q92878 1312 aa10.03□□□□□ -0.8
HDAC9-207ENST00000413509 MED23Q9ULK4 1368 aa10.02□□□□□ -0.8
HDAC9-207ENST00000413509 LTBP1Q14766 1721 aa10.02□□□□□ -0.8
HDAC9-207ENST00000413509 MYH7P12883 1935 aa10.02□□□□□ -0.81
HDAC9-207ENST00000413509 GTF2E1P29083 439 aaPredicted RBP10.02□□□□□ -0.81
HDAC9-207ENST00000413509 HOXA10P31260 410 aaPredicted RBP10.02□□□□□ -0.81
HDAC9-207ENST00000413509 EN1Q05925 392 aaPredicted RBP10.02□□□□□ -0.81
HDAC9-207ENST00000413509 EZH2Q15910 746 aaKnown RBP10.02□□□□□ -0.81
HDAC9-207ENST00000413509 SLC15A2Q16348 729 aa10.02□□□□□ -0.81
HDAC9-207ENST00000413509 CELF1Q92879 486 aaKnown RBP10.02□□□□□ -0.81
HDAC9-207ENST00000413509 DDRGK1Q96HY6 314 aa10.02□□□□□ -0.81
HDAC9-207ENST00000413509 NEUROD6Q96NK8 337 aa10.02□□□□□ -0.81
HDAC9-207ENST00000413509 MPHOSPH8Q99549 860 aa10.02□□□□□ -0.81
HDAC9-207ENST00000413509 IL25Q9H293 177 aa10.02□□□□□ -0.81
HDAC9-207ENST00000413509 DOCK2Q92608 1830 aa10.02□□□□□ -0.81
HDAC9-207ENST00000413509 COL11A2P13942 1736 aaPredicted RBP10.02□□□□□ -0.81
HDAC9-207ENST00000413509 RPS8P62241 208 aaKnown RBP10.01□□□□□ -0.81
HDAC9-207ENST00000413509 ST5P78524 1137 aa10.01□□□□□ -0.81
HDAC9-207ENST00000413509 CHRNDQ07001 517 aa10.01□□□□□ -0.81
HDAC9-207ENST00000413509 UBE4AQ14139 1066 aa10.01□□□□□ -0.81
HDAC9-207ENST00000413509 KBTBD3Q8NAB2 608 aa10.01□□□□□ -0.81
HDAC9-207ENST00000413509 MINPP1Q9UNW1 487 aa10.01□□□□□ -0.81
HDAC9-207ENST00000413509 ZNF804BA4D1E1 1349 aa10.01□□□□□ -0.81
HDAC9-207ENST00000413509 IRS2Q9Y4H2 1338 aa10.01□□□□□ -0.81
HDAC9-207ENST00000413509 SLC5A1P13866 664 aa10□□□□□ -0.81
HDAC9-207ENST00000413509 BAG6P46379 1132 aa10□□□□□ -0.81
HDAC9-207ENST00000413509 GRAPQ13588 217 aa10□□□□□ -0.81
HDAC9-207ENST00000413509 SCARF1Q14162 830 aa10□□□□□ -0.81
HDAC9-207ENST00000413509 CCDC158Q5M9N0 1113 aa10□□□□□ -0.81
HDAC9-207ENST00000413509 DDX46Q7L014 1031 aaKnown RBP10□□□□□ -0.81
HDAC9-207ENST00000413509 CCDC125Q86Z20 511 aa10□□□□□ -0.81
HDAC9-207ENST00000413509 GRAPLQ8TC17 118 aaPredicted RBP10□□□□□ -0.81
HDAC9-207ENST00000413509 EDC3Q96F86 508 aaKnown RBP10□□□□□ -0.81
HDAC9-207ENST00000413509 LSG1Q9H089 658 aaKnown RBP10□□□□□ -0.81
HDAC9-207ENST00000413509 DIAPH3Q9NSV4 1193 aa10□□□□□ -0.81
HDAC9-207ENST00000413509 PAG1Q9NWQ8 432 aa10□□□□□ -0.81
HDAC9-207ENST00000413509 IFIT1P09914 478 aaKnown RBP9.99□□□□□ -0.81
HDAC9-207ENST00000413509 UQCRFS1P1P0C7P4 283 aa9.99□□□□□ -0.81
HDAC9-207ENST00000413509 MCAMP43121 646 aa9.99□□□□□ -0.81
HDAC9-207ENST00000413509 PHKA1P46020 1223 aa9.99□□□□□ -0.81
HDAC9-207ENST00000413509 NMIQ13287 307 aaPredicted RBP9.99□□□□□ -0.81
HDAC9-207ENST00000413509 TTC39AQ5SRH9 613 aa9.99□□□□□ -0.81
HDAC9-207ENST00000413509 CCDC102BQ68D86 513 aa9.99□□□□□ -0.81
HDAC9-207ENST00000413509 CCDC24Q8N4L8 307 aa9.99□□□□□ -0.81
HDAC9-207ENST00000413509 HELBQ8NG08 1087 aaPredicted RBP9.99□□□□□ -0.81
HDAC9-207ENST00000413509 RUFY2Q8WXA3 655 aa9.99□□□□□ -0.81
HDAC9-207ENST00000413509 KCNB2Q92953 911 aa9.99□□□□□ -0.81
HDAC9-207ENST00000413509 CRAMP1Q96RY5 1269 aa9.99□□□□□ -0.81
HDAC9-207ENST00000413509 FSD1Q9BTV5 496 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms