RNA–Protein interactions for RNA: ENST00000413433.5

NOD1-203, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-203ENST00000413433 ETFBKMTQ8IXQ9 262 aa8.13□□□□□ -1.11
NOD1-203ENST00000413433 ALDH16A1Q8IZ83 802 aa8.13□□□□□ -1.11
NOD1-203ENST00000413433 SVOPQ8N4V2 548 aa8.13□□□□□ -1.11
NOD1-203ENST00000413433 CABP1Q9NZU7 370 aa8.13□□□□□ -1.11
NOD1-203ENST00000413433 DNMT3LQ9UJW3 386 aa8.13□□□□□ -1.11
NOD1-203ENST00000413433 FRMPD1Q5SYB0 1578 aa8.13□□□□□ -1.11
NOD1-203ENST00000413433 CDK13Q14004 1512 aaKnown RBP8.13□□□□□ -1.11
NOD1-203ENST00000413433 SCAPERQ9BY12 1400 aa8.12□□□□□ -1.11
NOD1-203ENST00000413433 ADAMTSL3P82987 1691 aa8.12□□□□□ -1.11
NOD1-203ENST00000413433 EML1O00423 815 aa8.12□□□□□ -1.11
NOD1-203ENST00000413433 EIF1AYO14602 144 aaKnown RBP8.12□□□□□ -1.11
NOD1-203ENST00000413433 LILRA1O75019 489 aa8.12□□□□□ -1.11
NOD1-203ENST00000413433 IRS1P35568 1242 aa8.12□□□□□ -1.11
NOD1-203ENST00000413433 ORC1Q13415 861 aa8.12□□□□□ -1.11
NOD1-203ENST00000413433 ZNF394Q53GI3 561 aa8.12□□□□□ -1.11
NOD1-203ENST00000413433 FAM26DQ5JW98 314 aa8.12□□□□□ -1.11
NOD1-203ENST00000413433 PPP1R26Q5T8A7 1209 aaPredicted RBP8.12□□□□□ -1.11
NOD1-203ENST00000413433 SOGA3Q5TF21 947 aa8.12□□□□□ -1.11
NOD1-203ENST00000413433 MEIOBQ8N635 442 aa8.12□□□□□ -1.11
NOD1-203ENST00000413433 IFT43Q96FT9 208 aa8.12□□□□□ -1.11
NOD1-203ENST00000413433 GMLQ99445 158 aa8.12□□□□□ -1.11
NOD1-203ENST00000413433 PGPEP1Q9NXJ5 209 aa8.12□□□□□ -1.11
NOD1-203ENST00000413433 FAM13BQ9NYF5 915 aa8.12□□□□□ -1.11
NOD1-203ENST00000413433 PCDHGB7Q9Y5F8 929 aa8.12□□□□□ -1.11
NOD1-203ENST00000413433 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.12□□□□□ -1.11
NOD1-203ENST00000413433 EEA1Q15075 1411 aa8.12□□□□□ -1.11
NOD1-203ENST00000413433 MADDQ8WXG6 1647 aa8.11□□□□□ -1.11
NOD1-203ENST00000413433 RPLP1P05386 114 aaKnown RBP8.11□□□□□ -1.11
NOD1-203ENST00000413433 HIRAP54198 1017 aaPredicted RBP8.11□□□□□ -1.11
NOD1-203ENST00000413433 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.11□□□□□ -1.11
NOD1-203ENST00000413433 EFCAB2Q5VUJ9 269 aa8.11□□□□□ -1.11
NOD1-203ENST00000413433 AFAP1Q8N556 730 aa8.11□□□□□ -1.11
NOD1-203ENST00000413433 CNKSR1Q969H4 720 aa8.11□□□□□ -1.11
NOD1-203ENST00000413433 COL25A1Q9BXS0 654 aaPredicted RBP8.11□□□□□ -1.11
NOD1-203ENST00000413433 DNAJC25Q9H1X3 360 aa8.11□□□□□ -1.11
NOD1-203ENST00000413433 KLK14Q9P0G3 267 aa8.11□□□□□ -1.11
NOD1-203ENST00000413433 DDX41Q9UJV9 622 aaKnown RBP8.11□□□□□ -1.11
NOD1-203ENST00000413433 HCN4Q9Y3Q4 1203 aa8.11□□□□□ -1.11
NOD1-203ENST00000413433 USP3Q9Y6I4 520 aa8.11□□□□□ -1.11
NOD1-203ENST00000413433 LMTK3Q96Q04 1460 aa8.11□□□□□ -1.11
NOD1-203ENST00000413433 STK10O94804 968 aaKnown RBP8.1□□□□□ -1.11
NOD1-203ENST00000413433 IL2RAP01589 272 aa8.1□□□□□ -1.11
NOD1-203ENST00000413433 CTSHP09668 335 aa8.1□□□□□ -1.11
NOD1-203ENST00000413433 NOS2P35228 1153 aa8.1□□□□□ -1.11
NOD1-203ENST00000413433 TEAD4Q15561 434 aa8.1□□□□□ -1.11
NOD1-203ENST00000413433 GPR152Q8TDT2 470 aa8.1□□□□□ -1.11
NOD1-203ENST00000413433 NANOS1Q8WY41 292 aaKnown RBP8.1□□□□□ -1.11
NOD1-203ENST00000413433 NUDT16Q96DE0 195 aaKnown RBP8.1□□□□□ -1.11
NOD1-203ENST00000413433 XAGE2Q96GT9 111 aa8.1□□□□□ -1.11
NOD1-203ENST00000413433 CFHR5Q9BXR6 569 aa8.1□□□□□ -1.11
NOD1-203ENST00000413433 ZSWIM4Q9H7M6 989 aa8.1□□□□□ -1.11
NOD1-203ENST00000413433 CPNE3O75131 537 aaKnown RBP8.09□□□□□ -1.11
NOD1-203ENST00000413433 SH3PXD2AQ5TCZ1 1133 aa8.09□□□□□ -1.11
NOD1-203ENST00000413433 POTEAQ6S8J7 498 aa8.09□□□□□ -1.11
NOD1-203ENST00000413433 TREML1Q86YW5 311 aa8.09□□□□□ -1.11
NOD1-203ENST00000413433 L3MBTL2Q969R5 705 aa8.09□□□□□ -1.11
NOD1-203ENST00000413433 SCARF2Q96GP6 870 aaPredicted RBP8.09□□□□□ -1.11
NOD1-203ENST00000413433 ESYT1Q9BSJ8 1104 aa8.09□□□□□ -1.11
NOD1-203ENST00000413433 TSEN34Q9BSV6 310 aaKnown RBP8.09□□□□□ -1.11
NOD1-203ENST00000413433 PHACTR1Q9C0D0 580 aa8.09□□□□□ -1.11
NOD1-203ENST00000413433 GGT7Q9UJ14 662 aa8.09□□□□□ -1.11
NOD1-203ENST00000413433 PLCH2O75038 1416 aa8.09□□□□□ -1.11
NOD1-203ENST00000413433 PCF11O94913 1555 aaKnown RBP8.09□□□□□ -1.11
NOD1-203ENST00000413433 TTC37Q6PGP7 1564 aa8.09□□□□□ -1.11
NOD1-203ENST00000413433 BCORL1Q5H9F3 1711 aa8.09□□□□□ -1.11
NOD1-203ENST00000413433 TLDC2A0PJX2 215 aa8.08□□□□□ -1.12
NOD1-203ENST00000413433 GTF2E1P29083 439 aaPredicted RBP8.08□□□□□ -1.12
NOD1-203ENST00000413433 XP32Q5T750 250 aa8.08□□□□□ -1.12
NOD1-203ENST00000413433 POGZQ7Z3K3 1410 aa8.08□□□□□ -1.12
NOD1-203ENST00000413433 OPLAHO14841 1288 aa8.07□□□□□ -1.12
NOD1-203ENST00000413433 ARHGEF15O94989 841 aa8.07□□□□□ -1.12
NOD1-203ENST00000413433 SLURP2P0DP57 97 aa8.07□□□□□ -1.12
NOD1-203ENST00000413433 ADD1P35611 737 aaKnown RBP8.07□□□□□ -1.12
NOD1-203ENST00000413433 RACK1P63244 317 aaKnown RBP8.07□□□□□ -1.12
NOD1-203ENST00000413433 PTSQ03393 145 aa8.07□□□□□ -1.12
NOD1-203ENST00000413433 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.07□□□□□ -1.12
NOD1-203ENST00000413433 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.07□□□□□ -1.12
NOD1-203ENST00000413433 C12orf49Q9H741 205 aa8.07□□□□□ -1.12
NOD1-203ENST00000413433 PARP3Q9Y6F1 533 aa8.07□□□□□ -1.12
NOD1-203ENST00000413433 RIMS1Q86UR5 1692 aaKnown RBP8.07□□□□□ -1.12
NOD1-203ENST00000413433 ZFYVE16Q7Z3T8 1539 aa8.07□□□□□ -1.12
NOD1-203ENST00000413433 TTLL8A6PVC2 850 aa8.06□□□□□ -1.12
NOD1-203ENST00000413433 GIPC1O14908 333 aa8.06□□□□□ -1.12
NOD1-203ENST00000413433 ADH1AP07327 375 aa8.06□□□□□ -1.12
NOD1-203ENST00000413433 PTPN12Q05209 780 aaKnown RBP8.06□□□□□ -1.12
NOD1-203ENST00000413433 CLN3Q13286 438 aa8.06□□□□□ -1.12
NOD1-203ENST00000413433 ZDHHC1Q8WTX9 485 aa8.06□□□□□ -1.12
NOD1-203ENST00000413433 NLRP3Q96P20 1036 aa8.06□□□□□ -1.12
NOD1-203ENST00000413433 OSBPL2Q9H1P3 480 aa8.06□□□□□ -1.12
NOD1-203ENST00000413433 ARHGEF40Q8TER5 1519 aa8.06□□□□□ -1.12
NOD1-203ENST00000413433 HECW1Q76N89 1606 aa8.06□□□□□ -1.12
NOD1-203ENST00000413433 SIGLEC1Q9BZZ2 1709 aa8.06□□□□□ -1.12
NOD1-203ENST00000413433 ARHGAP35Q9NRY4 1499 aa8.06□□□□□ -1.12
NOD1-203ENST00000413433 A6NHS1 94 aa8.05□□□□□ -1.12
NOD1-203ENST00000413433 RBL2Q08999 1139 aa8.05□□□□□ -1.12
NOD1-203ENST00000413433 HIF1AQ16665 826 aa8.05□□□□□ -1.12
NOD1-203ENST00000413433 RNFT1Q5M7Z0 435 aa8.05□□□□□ -1.12
NOD1-203ENST00000413433 SDE2Q6IQ49 451 aa8.05□□□□□ -1.12
NOD1-203ENST00000413433 WHAMMQ8TF30 809 aa8.05□□□□□ -1.12
NOD1-203ENST00000413433 NIFKQ9BYG3 293 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms