RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 MTMR7Q9Y216 660 aa8.37□□□□□ -1.07
PTPN3-203ENST00000412145 PPM1FP49593 454 aaPredicted RBP8.36□□□□□ -1.07
PTPN3-203ENST00000412145 ZNF165P49910 485 aa8.36□□□□□ -1.07
PTPN3-203ENST00000412145 ZNF444Q8N0Y2 327 aaPredicted RBP8.36□□□□□ -1.07
PTPN3-203ENST00000412145 CCT6BQ92526 530 aa8.36□□□□□ -1.07
PTPN3-203ENST00000412145 CAPZA3Q96KX2 299 aa8.36□□□□□ -1.07
PTPN3-203ENST00000412145 PRAM1Q96QH2 718 aa8.36□□□□□ -1.07
PTPN3-203ENST00000412145 CCDC62Q6P9F0 684 aa8.36□□□□□ -1.07
PTPN3-203ENST00000412145 TMC6Q7Z403 805 aa8.36□□□□□ -1.07
PTPN3-203ENST00000412145 RPGRIP1Q96KN7 1286 aa8.36□□□□□ -1.07
PTPN3-203ENST00000412145 CALM1P0DP23 149 aa8.36□□□□□ -1.07
PTPN3-203ENST00000412145 CALM2P0DP24 149 aa8.36□□□□□ -1.07
PTPN3-203ENST00000412145 CALM3P0DP25 149 aa8.36□□□□□ -1.07
PTPN3-203ENST00000412145 MTHFSP49914 203 aa8.36□□□□□ -1.07
PTPN3-203ENST00000412145 MTMR3Q13615 1198 aa8.36□□□□□ -1.07
PTPN3-203ENST00000412145 GLT8D2Q9H1C3 349 aa8.36□□□□□ -1.07
PTPN3-203ENST00000412145 KCNG1Q9UIX4 513 aa8.36□□□□□ -1.07
PTPN3-203ENST00000412145 TRIM35Q9UPQ4 493 aa8.36□□□□□ -1.07
PTPN3-203ENST00000412145 NOC2LQ9Y3T9 749 aaKnown RBP8.36□□□□□ -1.07
PTPN3-203ENST00000412145 CALML3P27482 149 aa8.36□□□□□ -1.07
PTPN3-203ENST00000412145 PRPF4BQ13523 1007 aaKnown RBP8.36□□□□□ -1.07
PTPN3-203ENST00000412145 RUFY4Q6ZNE9 571 aa8.36□□□□□ -1.07
PTPN3-203ENST00000412145 CETN3O15182 167 aa8.36□□□□□ -1.07
PTPN3-203ENST00000412145 ZNF365Q70YC5 407 aa8.36□□□□□ -1.07
PTPN3-203ENST00000412145 GBP7Q8N8V2 638 aaPredicted RBP8.36□□□□□ -1.07
PTPN3-203ENST00000412145 TBC1D31Q96DN5 1066 aa8.36□□□□□ -1.07
PTPN3-203ENST00000412145 POLR3DP05423 398 aaPredicted RBP8.36□□□□□ -1.07
PTPN3-203ENST00000412145 HSP90AA5PQ58FG0 334 aa8.36□□□□□ -1.07
PTPN3-203ENST00000412145 FSIP1Q8NA03 581 aa8.36□□□□□ -1.07
PTPN3-203ENST00000412145 LARSQ9P2J5 1176 aaKnown RBP8.36□□□□□ -1.07
PTPN3-203ENST00000412145 CC2D2AQ9P2K1 1620 aa8.36□□□□□ -1.07
PTPN3-203ENST00000412145 N4BP3O15049 544 aa8.36□□□□□ -1.07
PTPN3-203ENST00000412145 CAPN2P17655 700 aa8.36□□□□□ -1.07
PTPN3-203ENST00000412145 INF2Q27J81 1249 aa8.36□□□□□ -1.07
PTPN3-203ENST00000412145 VPS52Q8N1B4 723 aa8.36□□□□□ -1.07
PTPN3-203ENST00000412145 BICD1Q96G01 975 aa8.36□□□□□ -1.07
PTPN3-203ENST00000412145 SEPT10Q9P0V9 454 aa8.36□□□□□ -1.07
PTPN3-203ENST00000412145 LRRC9Q6ZRR7 1453 aa8.36□□□□□ -1.07
PTPN3-203ENST00000412145 XPCQ01831 940 aaPredicted RBP8.35□□□□□ -1.07
PTPN3-203ENST00000412145 TRIM47Q96LD4 638 aa8.35□□□□□ -1.07
PTPN3-203ENST00000412145 ZNF213O14771 459 aa8.35□□□□□ -1.07
PTPN3-203ENST00000412145 CBX1P83916 185 aa8.35□□□□□ -1.07
PTPN3-203ENST00000412145 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.35□□□□□ -1.07
PTPN3-203ENST00000412145 CERS3Q8IU89 383 aa8.35□□□□□ -1.07
PTPN3-203ENST00000412145 ATRIPQ8WXE1 791 aa8.35□□□□□ -1.07
PTPN3-203ENST00000412145 OGFRQ9NZT2 677 aa8.35□□□□□ -1.07
PTPN3-203ENST00000412145 ERBINQ96RT1 1412 aa8.35□□□□□ -1.07
PTPN3-203ENST00000412145 IFT140Q96RY7 1462 aa8.35□□□□□ -1.07
PTPN3-203ENST00000412145 RPL13P26373 211 aaKnown RBP8.35□□□□□ -1.07
PTPN3-203ENST00000412145 CWC27Q6UX04 472 aaKnown RBP8.35□□□□□ -1.07
PTPN3-203ENST00000412145 UBE2Q2Q8WVN8 375 aa8.35□□□□□ -1.07
PTPN3-203ENST00000412145 KIFAP3Q92845 792 aa8.35□□□□□ -1.07
PTPN3-203ENST00000412145 KIAA1107Q9UPP5 1409 aa8.35□□□□□ -1.07
PTPN3-203ENST00000412145 SPDYE4A6NLX3 237 aa8.35□□□□□ -1.07
PTPN3-203ENST00000412145 CLCN1P35523 988 aa8.35□□□□□ -1.07
PTPN3-203ENST00000412145 GABPB1Q06547 395 aaPredicted RBP8.35□□□□□ -1.07
PTPN3-203ENST00000412145 TAF7Q15545 349 aaPredicted RBP8.35□□□□□ -1.07
PTPN3-203ENST00000412145 RTL9Q8NET4 1388 aa8.35□□□□□ -1.07
PTPN3-203ENST00000412145 GIPC1O14908 333 aa8.35□□□□□ -1.07
PTPN3-203ENST00000412145 GOLGA8BA8MQT2 603 aa8.35□□□□□ -1.07
PTPN3-203ENST00000412145 NLRP5P59047 1200 aa8.35□□□□□ -1.07
PTPN3-203ENST00000412145 EXOSC9Q06265 439 aaKnown RBP8.35□□□□□ -1.07
PTPN3-203ENST00000412145 SEL1L2Q5TEA6 688 aa8.35□□□□□ -1.07
PTPN3-203ENST00000412145 ZNF530Q6P9A1 599 aaPredicted RBP8.35□□□□□ -1.07
PTPN3-203ENST00000412145 CCDC144CPQ8IYA2 1237 aa8.35□□□□□ -1.07
PTPN3-203ENST00000412145 UBA5Q9GZZ9 404 aa8.35□□□□□ -1.07
PTPN3-203ENST00000412145 ADCY5O95622 1261 aa8.35□□□□□ -1.07
PTPN3-203ENST00000412145 TERF1P54274 439 aa8.35□□□□□ -1.07
PTPN3-203ENST00000412145 TMOD4Q9NZQ9 345 aa8.35□□□□□ -1.07
PTPN3-203ENST00000412145 FAM169AQ9Y6X4 670 aa8.35□□□□□ -1.07
PTPN3-203ENST00000412145 BMP2KLQ5H9B9 411 aa8.34□□□□□ -1.07
PTPN3-203ENST00000412145 TACC3Q9Y6A5 838 aa8.34□□□□□ -1.07
PTPN3-203ENST00000412145 IARSP41252 1262 aaKnown RBP8.34□□□□□ -1.07
PTPN3-203ENST00000412145 SLC8A3P57103 927 aa8.34□□□□□ -1.07
PTPN3-203ENST00000412145 WHAMMP3Q1A5X7 153 aa8.34□□□□□ -1.07
PTPN3-203ENST00000412145 MAIP1Q8WWC4 291 aa8.34□□□□□ -1.07
PTPN3-203ENST00000412145 KIF11P52732 1056 aa8.34□□□□□ -1.07
PTPN3-203ENST00000412145 PRDM11Q9NQV5 511 aa8.34□□□□□ -1.07
PTPN3-203ENST00000412145 GOLGA8AA7E2F4 631 aa8.34□□□□□ -1.07
PTPN3-203ENST00000412145 HSPA8P11142 646 aaKnown RBP8.34□□□□□ -1.07
PTPN3-203ENST00000412145 TCERG1LQ5VWI1 586 aa8.34□□□□□ -1.07
PTPN3-203ENST00000412145 ADAMTS8Q9UP79 889 aa8.34□□□□□ -1.07
PTPN3-203ENST00000412145 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.34□□□□□ -1.07
PTPN3-203ENST00000412145 PHLDB3Q6NSJ2 640 aa8.34□□□□□ -1.07
PTPN3-203ENST00000412145 GSTA5Q7RTV2 222 aa8.34□□□□□ -1.07
PTPN3-203ENST00000412145 CCDC63Q8NA47 563 aa8.34□□□□□ -1.07
PTPN3-203ENST00000412145 PARP2Q9UGN5 583 aa8.34□□□□□ -1.07
PTPN3-203ENST00000412145 RSPH14Q9UHP6 348 aa8.34□□□□□ -1.07
PTPN3-203ENST00000412145 ADAMTS2O95450 1211 aa8.34□□□□□ -1.08
PTPN3-203ENST00000412145 NCOA7Q8NI08 942 aa8.34□□□□□ -1.08
PTPN3-203ENST00000412145 CABP5Q9NP86 173 aa8.34□□□□□ -1.08
PTPN3-203ENST00000412145 PFDN4Q9NQP4 134 aa8.34□□□□□ -1.08
PTPN3-203ENST00000412145 I3L4J1 428 aa8.33□□□□□ -1.08
PTPN3-203ENST00000412145 SLC4A8Q2Y0W8 1093 aa8.33□□□□□ -1.08
PTPN3-203ENST00000412145 METTL24Q5JXM2 366 aa8.33□□□□□ -1.08
PTPN3-203ENST00000412145 PPFIA4O75335 1185 aa8.33□□□□□ -1.08
PTPN3-203ENST00000412145 UQCRFS1P1P0C7P4 283 aa8.33□□□□□ -1.08
PTPN3-203ENST00000412145 CAMSAP2Q08AD1 1489 aa8.33□□□□□ -1.08
PTPN3-203ENST00000412145 BTBD11A6QL63 1104 aa8.33□□□□□ -1.08
PTPN3-203ENST00000412145 GNAT3A8MTJ3 354 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms