RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 PRAMEF18Q5VWM3 479 aa9.17□□□□□ -0.94
LSM8-202ENST00000411938 TMC4Q7Z404 712 aa9.17□□□□□ -0.94
LSM8-202ENST00000411938 EYA3Q99504 573 aa9.17□□□□□ -0.94
LSM8-202ENST00000411938 CFHR5Q9BXR6 569 aa9.17□□□□□ -0.94
LSM8-202ENST00000411938 SCAF8Q9UPN6 1271 aaKnown RBP9.17□□□□□ -0.94
LSM8-202ENST00000411938 ALDH1A1P00352 501 aa9.16□□□□□ -0.94
LSM8-202ENST00000411938 VIL1P09327 827 aaKnown RBP9.16□□□□□ -0.94
LSM8-202ENST00000411938 HSPA5P11021 654 aaKnown RBP9.16□□□□□ -0.94
LSM8-202ENST00000411938 CNGB1Q14028 1251 aaPredicted RBP9.16□□□□□ -0.94
LSM8-202ENST00000411938 CHRDL2Q6WN34 429 aa9.16□□□□□ -0.94
LSM8-202ENST00000411938 ARMC5Q96C12 935 aa9.16□□□□□ -0.94
LSM8-202ENST00000411938 OTUD5Q96G74 571 aa9.16□□□□□ -0.94
LSM8-202ENST00000411938 POLLQ9UGP5 575 aa9.16□□□□□ -0.94
LSM8-202ENST00000411938 TIMELESSQ9UNS1 1208 aa9.16□□□□□ -0.94
LSM8-202ENST00000411938 PTPN22Q9Y2R2 807 aa9.16□□□□□ -0.94
LSM8-202ENST00000411938 DUOX1Q9NRD9 1551 aa9.16□□□□□ -0.94
LSM8-202ENST00000411938 NF2P35240 595 aa9.15□□□□□ -0.94
LSM8-202ENST00000411938 ZNF280AP59817 542 aaPredicted RBP9.15□□□□□ -0.94
LSM8-202ENST00000411938 GPSM2P81274 684 aa9.15□□□□□ -0.94
LSM8-202ENST00000411938 ERO1AQ96HE7 468 aa9.15□□□□□ -0.94
LSM8-202ENST00000411938 ZC3H12CQ9C0D7 883 aaKnown RBP9.15□□□□□ -0.94
LSM8-202ENST00000411938 RSPH6AQ9H0K4 717 aa9.15□□□□□ -0.94
LSM8-202ENST00000411938 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.15□□□□□ -0.94
LSM8-202ENST00000411938 TRMT112Q9UI30 125 aaKnown RBP9.15□□□□□ -0.94
LSM8-202ENST00000411938 PITPNM2Q9BZ72 1349 aa9.14□□□□□ -0.95
LSM8-202ENST00000411938 USP17L8P0C7I0 530 aa9.14□□□□□ -0.95
LSM8-202ENST00000411938 PTPN12Q05209 780 aaKnown RBP9.14□□□□□ -0.95
LSM8-202ENST00000411938 PRKG1Q13976 671 aa9.14□□□□□ -0.95
LSM8-202ENST00000411938 SLC4A8Q2Y0W8 1093 aa9.14□□□□□ -0.95
LSM8-202ENST00000411938 SPRYD7Q5W111 196 aa9.14□□□□□ -0.95
LSM8-202ENST00000411938 RSBN1LQ6PCB5 846 aaPredicted RBP9.14□□□□□ -0.95
LSM8-202ENST00000411938 ARMC9Q7Z3E5 817 aa9.14□□□□□ -0.95
LSM8-202ENST00000411938 AGBL3Q8NEM8 1001 aa9.14□□□□□ -0.95
LSM8-202ENST00000411938 CD99L2Q8TCZ2 262 aa9.14□□□□□ -0.95
LSM8-202ENST00000411938 EFCC1Q9HA90 598 aa9.14□□□□□ -0.95
LSM8-202ENST00000411938 MYOZ2Q9NPC6 264 aa9.14□□□□□ -0.95
LSM8-202ENST00000411938 RBM27Q9P2N5 1060 aaKnown RBP9.14□□□□□ -0.95
LSM8-202ENST00000411938 SZT2Q5T011 3432 aa9.14□□□□□ -0.95
LSM8-202ENST00000411938 COL3A1P02461 1466 aaPredicted RBP9.14□□□□□ -0.95
LSM8-202ENST00000411938 SH3TC1Q8TE82 1336 aa9.13□□□□□ -0.95
LSM8-202ENST00000411938 HTATSF1O43719 755 aaKnown RBP9.13□□□□□ -0.95
LSM8-202ENST00000411938 MYCP01106 439 aaPredicted RBP9.13□□□□□ -0.95
LSM8-202ENST00000411938 INHBEP58166 350 aa9.13□□□□□ -0.95
LSM8-202ENST00000411938 NLRP10Q86W26 655 aa9.13□□□□□ -0.95
LSM8-202ENST00000411938 IFNL1Q8IU54 200 aa9.13□□□□□ -0.95
LSM8-202ENST00000411938 TBC1D16Q8TBP0 767 aa9.13□□□□□ -0.95
LSM8-202ENST00000411938 PNISRQ8TF01 805 aaKnown RBP9.13□□□□□ -0.95
LSM8-202ENST00000411938 CELF1Q92879 486 aaKnown RBP9.13□□□□□ -0.95
LSM8-202ENST00000411938 ZNF428Q96B54 188 aa9.13□□□□□ -0.95
LSM8-202ENST00000411938 THUMPD2Q9BTF0 503 aaKnown RBP9.13□□□□□ -0.95
LSM8-202ENST00000411938 HTTP42858 3142 aa9.13□□□□□ -0.95
LSM8-202ENST00000411938 TAF1P21675 1872 aa9.13□□□□□ -0.95
LSM8-202ENST00000411938 LAMB4A4D0S4 1761 aa9.12□□□□□ -0.95
LSM8-202ENST00000411938 RBBP6Q7Z6E9 1792 aaKnown RBP9.12□□□□□ -0.95
LSM8-202ENST00000411938 MANSC4A6NHS7 340 aaPredicted RBP9.12□□□□□ -0.95
LSM8-202ENST00000411938 U2AF1L5P0DN76 240 aaPredicted RBP9.12□□□□□ -0.95
LSM8-202ENST00000411938 MNX1P50219 401 aaPredicted RBP9.12□□□□□ -0.95
LSM8-202ENST00000411938 EIF4A1P60842 406 aaKnown RBP9.12□□□□□ -0.95
LSM8-202ENST00000411938 U2AF1Q01081 240 aaKnown RBP eCLIP9.12□□□□□ -0.95
LSM8-202ENST00000411938 HSP90AB3PQ58FF7 597 aa9.12□□□□□ -0.95
LSM8-202ENST00000411938 NBPF11Q86T75 865 aa9.12□□□□□ -0.95
LSM8-202ENST00000411938 NECTIN2Q92692 538 aa9.12□□□□□ -0.95
LSM8-202ENST00000411938 DPF3Q92784 378 aa9.12□□□□□ -0.95
LSM8-202ENST00000411938 SLC10A4Q96EP9 437 aa9.12□□□□□ -0.95
LSM8-202ENST00000411938 ZNF333Q96JL9 665 aa9.12□□□□□ -0.95
LSM8-202ENST00000411938 CFAP53Q96M91 514 aa9.12□□□□□ -0.95
LSM8-202ENST00000411938 NUDCQ9Y266 331 aa9.12□□□□□ -0.95
LSM8-202ENST00000411938 ERBB4Q15303 1308 aa9.11□□□□□ -0.95
LSM8-202ENST00000411938 UFL1O94874 794 aa9.11□□□□□ -0.95
LSM8-202ENST00000411938 NBPF9Q3BBW0 867 aa9.11□□□□□ -0.95
LSM8-202ENST00000411938 SLC9C1Q4G0N8 1177 aa9.11□□□□□ -0.95
LSM8-202ENST00000411938 ANGEL1Q9UNK9 670 aaKnown RBP9.11□□□□□ -0.95
LSM8-202ENST00000411938 SCN9AQ15858 1988 aa9.11□□□□□ -0.95
LSM8-202ENST00000411938 RANBP2P49792 3224 aaKnown RBP9.11□□□□□ -0.95
LSM8-202ENST00000411938 LAMB2P55268 1798 aa9.11□□□□□ -0.95
LSM8-202ENST00000411938 ANKRD36CQ5JPF3 1778 aa9.11□□□□□ -0.95
LSM8-202ENST00000411938 IGF2BP3O00425 579 aaKnown RBP eCLIP9.1□□□□□ -0.95
LSM8-202ENST00000411938 ANXA1P04083 346 aa9.1□□□□□ -0.95
LSM8-202ENST00000411938 EIF2S2P20042 333 aaKnown RBP9.1□□□□□ -0.95
LSM8-202ENST00000411938 SP3Q02447 781 aa9.1□□□□□ -0.95
LSM8-202ENST00000411938 AIMP1Q12904 312 aaKnown RBP9.1□□□□□ -0.95
LSM8-202ENST00000411938 CRHR2Q13324 411 aa9.1□□□□□ -0.95
LSM8-202ENST00000411938 LDLRAD1Q5T700 205 aa9.1□□□□□ -0.95
LSM8-202ENST00000411938 OTUD7BQ6GQQ9 843 aa9.1□□□□□ -0.95
LSM8-202ENST00000411938 GMLQ99445 158 aa9.1□□□□□ -0.95
LSM8-202ENST00000411938 ANKIB1Q9P2G1 1089 aa9.1□□□□□ -0.95
LSM8-202ENST00000411938 ZNF609O15014 1411 aa9.1□□□□□ -0.95
LSM8-202ENST00000411938 LRRC37AA6NMS7 1700 aa9.1□□□□□ -0.95
LSM8-202ENST00000411938 USP17L3A6NCW0 530 aa9.09□□□□□ -0.95
LSM8-202ENST00000411938 USP17L4A6NCW7 530 aa9.09□□□□□ -0.95
LSM8-202ENST00000411938 RPS8P62241 208 aaKnown RBP9.09□□□□□ -0.95
LSM8-202ENST00000411938 ARHGEF6Q15052 776 aa9.09□□□□□ -0.95
LSM8-202ENST00000411938 SF3B3Q15393 1217 aaKnown RBP9.09□□□□□ -0.95
LSM8-202ENST00000411938 PROSER3Q2NL68 480 aa9.09□□□□□ -0.95
LSM8-202ENST00000411938 USP17L1Q7RTZ2 530 aa9.09□□□□□ -0.95
LSM8-202ENST00000411938 OGFOD1Q8N543 542 aa9.09□□□□□ -0.95
LSM8-202ENST00000411938 GGA1Q9UJY5 639 aa9.09□□□□□ -0.95
LSM8-202ENST00000411938 PTCH2Q9Y6C5 1203 aa9.09□□□□□ -0.95
LSM8-202ENST00000411938 CENPFP49454 3210 aa9.09□□□□□ -0.96
LSM8-202ENST00000411938 DDX60Q8IY21 1712 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms