RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 CTR9Q6PD62 1173 aa20.96■□□□□ 0.95
HCG11-201ENST00000411553 SLC9C2Q5TAH2 1124 aa20.96■□□□□ 0.95
HCG11-201ENST00000411553 MEIS3Q99687 375 aa20.96■□□□□ 0.95
HCG11-201ENST00000411553 KSR2Q6VAB6 950 aa20.96■□□□□ 0.95
HCG11-201ENST00000411553 LRRC2Q9BYS8 371 aa20.96■□□□□ 0.95
HCG11-201ENST00000411553 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.96■□□□□ 0.95
HCG11-201ENST00000411553 NUCB1Q02818 461 aa20.95■□□□□ 0.95
HCG11-201ENST00000411553 VTI1AQ96AJ9 217 aa20.95■□□□□ 0.95
HCG11-201ENST00000411553 RRP9O43818 475 aaKnown RBP20.95■□□□□ 0.94
HCG11-201ENST00000411553 FERP16591 822 aa20.95■□□□□ 0.94
HCG11-201ENST00000411553 CA8P35219 290 aa20.95■□□□□ 0.94
HCG11-201ENST00000411553 BBXQ8WY36 941 aaPredicted RBP20.95■□□□□ 0.94
HCG11-201ENST00000411553 TMX3Q96JJ7 454 aa20.95■□□□□ 0.94
HCG11-201ENST00000411553 SSX2IPQ9Y2D8 614 aa20.95■□□□□ 0.94
HCG11-201ENST00000411553 RBM8AQ9Y5S9 174 aaKnown RBP20.95■□□□□ 0.94
HCG11-201ENST00000411553 DISP3Q9P2K9 1392 aa20.95■□□□□ 0.94
HCG11-201ENST00000411553 SDSP20132 328 aa20.95■□□□□ 0.94
HCG11-201ENST00000411553 DDB1Q16531 1140 aa20.95■□□□□ 0.94
HCG11-201ENST00000411553 DDX12PQ92771 950 aa20.95■□□□□ 0.94
HCG11-201ENST00000411553 POLR3GO15318 223 aaPredicted RBP20.95■□□□□ 0.94
HCG11-201ENST00000411553 LRRC45Q96CN5 670 aa20.95■□□□□ 0.94
HCG11-201ENST00000411553 CLEC11AQ9Y240 323 aa20.95■□□□□ 0.94
HCG11-201ENST00000411553 MAGEB6P1A0A0J9YX57 407 aa20.94■□□□□ 0.94
HCG11-201ENST00000411553 GNG11P61952 73 aa20.94■□□□□ 0.94
HCG11-201ENST00000411553 GRIN2AQ12879 1464 aa20.94■□□□□ 0.94
HCG11-201ENST00000411553 UBASH3AP57075 661 aa20.94■□□□□ 0.94
HCG11-201ENST00000411553 C6orf50Q9HD87 102 aa20.94■□□□□ 0.94
HCG11-201ENST00000411553 CUL7Q14999 1698 aa20.94■□□□□ 0.94
HCG11-201ENST00000411553 PPM1EQ8WY54 764 aa20.94■□□□□ 0.94
HCG11-201ENST00000411553 B4DLN1 442 aa20.93■□□□□ 0.94
HCG11-201ENST00000411553 CYLC1P35663 651 aaPredicted RBP20.93■□□□□ 0.94
HCG11-201ENST00000411553 MRPL12P52815 198 aaKnown RBP20.93■□□□□ 0.94
HCG11-201ENST00000411553 HDAC1Q13547 482 aaPredicted RBP20.93■□□□□ 0.94
HCG11-201ENST00000411553 UBAP1LF5GYI3 381 aa20.93■□□□□ 0.94
HCG11-201ENST00000411553 SPAG1Q07617 926 aa20.93■□□□□ 0.94
HCG11-201ENST00000411553 CEP63Q96MT8 703 aa20.93■□□□□ 0.94
HCG11-201ENST00000411553 RBM27Q9P2N5 1060 aaKnown RBP20.93■□□□□ 0.94
HCG11-201ENST00000411553 RALGAPBQ86X10 1494 aa20.93■□□□□ 0.94
HCG11-201ENST00000411553 IGHDP01880 384 aa20.93■□□□□ 0.94
HCG11-201ENST00000411553 FBLN1P23142 703 aa20.93■□□□□ 0.94
HCG11-201ENST00000411553 PDE1AP54750 535 aa20.93■□□□□ 0.94
HCG11-201ENST00000411553 Q6ZUG5 572 aa20.93■□□□□ 0.94
HCG11-201ENST00000411553 CALM1P0DP23 149 aa20.92■□□□□ 0.94
HCG11-201ENST00000411553 CALM2P0DP24 149 aa20.92■□□□□ 0.94
HCG11-201ENST00000411553 CALM3P0DP25 149 aa20.92■□□□□ 0.94
HCG11-201ENST00000411553 ASIC1P78348 528 aa20.92■□□□□ 0.94
HCG11-201ENST00000411553 ATP8B2P98198 1209 aa20.92■□□□□ 0.94
HCG11-201ENST00000411553 PPP1R14CQ8TAE6 165 aa20.92■□□□□ 0.94
HCG11-201ENST00000411553 PSMA7O14818 248 aa20.92■□□□□ 0.94
HCG11-201ENST00000411553 CBX1P83916 185 aa20.92■□□□□ 0.94
HCG11-201ENST00000411553 SPECC1LQ69YQ0 1117 aa20.92■□□□□ 0.94
HCG11-201ENST00000411553 DZIP3Q86Y13 1208 aaKnown RBP20.92■□□□□ 0.94
HCG11-201ENST00000411553 CEP112Q8N8E3 955 aa20.92■□□□□ 0.94
HCG11-201ENST00000411553 GNAT2P19087 354 aa20.92■□□□□ 0.94
HCG11-201ENST00000411553 TPTE2Q6XPS3 522 aa20.92■□□□□ 0.94
HCG11-201ENST00000411553 VEZTQ9HBM0 779 aa20.92■□□□□ 0.94
HCG11-201ENST00000411553 ZNF354CQ86Y25 554 aa20.91■□□□□ 0.94
HCG11-201ENST00000411553 GIMAP7Q8NHV1 300 aa20.91■□□□□ 0.94
HCG11-201ENST00000411553 MRPS27Q92552 414 aaKnown RBP20.91■□□□□ 0.94
HCG11-201ENST00000411553 C8orf37Q96NL8 207 aa20.91■□□□□ 0.94
HCG11-201ENST00000411553 IMPG2Q9BZV3 1241 aa20.91■□□□□ 0.94
HCG11-201ENST00000411553 PAG1Q9NWQ8 432 aa20.91■□□□□ 0.94
HCG11-201ENST00000411553 PLCG2P16885 1265 aa20.91■□□□□ 0.94
HCG11-201ENST00000411553 ZC3H12CQ9C0D7 883 aaKnown RBP20.91■□□□□ 0.94
HCG11-201ENST00000411553 TTC12Q9H892 705 aaPredicted RBP20.91■□□□□ 0.94
HCG11-201ENST00000411553 CKAP4Q07065 602 aaKnown RBP20.91■□□□□ 0.94
HCG11-201ENST00000411553 GIMAP6Q6P9H5 292 aa20.91■□□□□ 0.94
HCG11-201ENST00000411553 SIRT1Q96EB6 747 aa20.91■□□□□ 0.94
HCG11-201ENST00000411553 TBC1D32Q96NH3 1257 aa20.91■□□□□ 0.94
HCG11-201ENST00000411553 ESYT1Q9BSJ8 1104 aa20.91■□□□□ 0.94
HCG11-201ENST00000411553 RTL9Q8NET4 1388 aa20.91■□□□□ 0.94
HCG11-201ENST00000411553 TCEANC2Q96MN5 208 aa20.91■□□□□ 0.94
HCG11-201ENST00000411553 PPIP5K1Q6PFW1 1433 aa20.9■□□□□ 0.94
HCG11-201ENST00000411553 SPDYE3A6NKU9 549 aa20.9■□□□□ 0.94
HCG11-201ENST00000411553 RRP36Q96EU6 259 aaKnown RBP20.9■□□□□ 0.94
HCG11-201ENST00000411553 TCHPQ9BT92 498 aa20.9■□□□□ 0.94
HCG11-201ENST00000411553 CEP135Q66GS9 1140 aa20.9■□□□□ 0.94
HCG11-201ENST00000411553 MRVI1Q9Y6F6 885 aa20.9■□□□□ 0.94
HCG11-201ENST00000411553 GRM1Q13255 1194 aa20.9■□□□□ 0.94
HCG11-201ENST00000411553 KLHL40Q2TBA0 621 aa20.9■□□□□ 0.94
HCG11-201ENST00000411553 FAM107BQ9H098 131 aa20.9■□□□□ 0.94
HCG11-201ENST00000411553 MAP3K9P80192 1104 aa20.9■□□□□ 0.94
HCG11-201ENST00000411553 PLS1Q14651 629 aa20.9■□□□□ 0.94
HCG11-201ENST00000411553 CCDC155Q8N6L0 562 aa20.9■□□□□ 0.94
HCG11-201ENST00000411553 ANKRD44Q8N8A2 993 aa20.9■□□□□ 0.94
HCG11-201ENST00000411553 IL2RBP14784 551 aa20.89■□□□□ 0.94
HCG11-201ENST00000411553 PARP3Q9Y6F1 533 aa20.89■□□□□ 0.94
HCG11-201ENST00000411553 NCBP1Q09161 790 aaKnown RBP20.89■□□□□ 0.93
HCG11-201ENST00000411553 SREK1Q8WXA9 508 aaKnown RBP20.89■□□□□ 0.93
HCG11-201ENST00000411553 CALML3P27482 149 aa20.89■□□□□ 0.93
HCG11-201ENST00000411553 PRPHP41219 470 aa20.89■□□□□ 0.93
HCG11-201ENST00000411553 RGS22Q8NE09 1264 aa20.89■□□□□ 0.93
HCG11-201ENST00000411553 ZSWIM4Q9H7M6 989 aa20.89■□□□□ 0.93
HCG11-201ENST00000411553 RTCBQ9Y3I0 505 aaKnown RBP20.89■□□□□ 0.93
HCG11-201ENST00000411553 HSF2BPO75031 334 aa20.88■□□□□ 0.93
HCG11-201ENST00000411553 SELENOOQ9BVL4 669 aa20.88■□□□□ 0.93
HCG11-201ENST00000411553 TRIM75PA6NK02 468 aa20.88■□□□□ 0.93
HCG11-201ENST00000411553 HCLS1P14317 486 aaPredicted RBP20.88■□□□□ 0.93
HCG11-201ENST00000411553 MARCKSP29966 332 aaPredicted RBP20.88■□□□□ 0.93
HCG11-201ENST00000411553 ZSCAN23Q3MJ62 389 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms