RNA–Protein interactions for RNA: ENST00000404525.5

LTBP1-202, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP1, Length 5,092 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-202ENST00000404525 TECPR2O15040 1411 aa9.36□□□□□ -0.91
LTBP1-202ENST00000404525 GLRX3O76003 335 aaKnown RBP9.36□□□□□ -0.91
LTBP1-202ENST00000404525 KIAA0754O94854 1291 aa9.36□□□□□ -0.91
LTBP1-202ENST00000404525 FILIP1Q7Z7B0 1213 aa9.36□□□□□ -0.91
LTBP1-202ENST00000404525 ZBTB3Q9H5J0 574 aa9.36□□□□□ -0.91
LTBP1-202ENST00000404525 PPP1R1BQ9UD71 204 aaPredicted RBP9.36□□□□□ -0.91
LTBP1-202ENST00000404525 TRMT112Q9UI30 125 aaKnown RBP9.36□□□□□ -0.91
LTBP1-202ENST00000404525 EXOC6BQ9Y2D4 811 aa9.36□□□□□ -0.91
LTBP1-202ENST00000404525 MAP3K2Q9Y2U5 619 aa9.36□□□□□ -0.91
LTBP1-202ENST00000404525 IRX3P78415 501 aaPredicted RBP9.36□□□□□ -0.91
LTBP1-202ENST00000404525 CCDC181Q5TID7 509 aa9.36□□□□□ -0.91
LTBP1-202ENST00000404525 TMCO3Q6UWJ1 677 aa9.36□□□□□ -0.91
LTBP1-202ENST00000404525 UBXN4Q92575 508 aa9.36□□□□□ -0.91
LTBP1-202ENST00000404525 KIF1BPQ96EK5 621 aa9.36□□□□□ -0.91
LTBP1-202ENST00000404525 DEF6Q9H4E7 631 aa9.36□□□□□ -0.91
LTBP1-202ENST00000404525 CEP126Q9P2H0 1117 aa9.36□□□□□ -0.91
LTBP1-202ENST00000404525 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.36□□□□□ -0.91
LTBP1-202ENST00000404525 V9GYY5 206 aaPredicted RBP9.36□□□□□ -0.91
LTBP1-202ENST00000404525 KRT18P05783 430 aaKnown RBP9.36□□□□□ -0.91
LTBP1-202ENST00000404525 NCBP1Q09161 790 aaKnown RBP9.36□□□□□ -0.91
LTBP1-202ENST00000404525 ANKRD13DQ6ZTN6 518 aa9.36□□□□□ -0.91
LTBP1-202ENST00000404525 WASF1Q92558 559 aa9.36□□□□□ -0.91
LTBP1-202ENST00000404525 CDK12Q9NYV4 1490 aaPredicted RBP9.36□□□□□ -0.91
LTBP1-202ENST00000404525 FKBP4Q02790 459 aaKnown RBP eCLIP9.36□□□□□ -0.91
LTBP1-202ENST00000404525 CEP85Q6P2H3 762 aa9.36□□□□□ -0.91
LTBP1-202ENST00000404525 PPP1R42Q7Z4L9 355 aa9.36□□□□□ -0.91
LTBP1-202ENST00000404525 CCDC83Q8IWF9 413 aa9.36□□□□□ -0.91
LTBP1-202ENST00000404525 SIRT2Q8IXJ6 389 aa9.36□□□□□ -0.91
LTBP1-202ENST00000404525 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.36□□□□□ -0.91
LTBP1-202ENST00000404525 CHPF2Q9P2E5 772 aa9.36□□□□□ -0.91
LTBP1-202ENST00000404525 WDR17Q8IZU2 1322 aa9.36□□□□□ -0.91
LTBP1-202ENST00000404525 IQSEC2Q5JU85 1478 aa9.36□□□□□ -0.91
LTBP1-202ENST00000404525 F6X3S4 739 aa9.35□□□□□ -0.91
LTBP1-202ENST00000404525 ABCC4O15439 1325 aa9.35□□□□□ -0.91
LTBP1-202ENST00000404525 RAB11FIP3O75154 756 aa9.35□□□□□ -0.91
LTBP1-202ENST00000404525 CASTP20810 708 aaKnown RBP9.35□□□□□ -0.91
LTBP1-202ENST00000404525 USP8P40818 1118 aa9.35□□□□□ -0.91
LTBP1-202ENST00000404525 TYRO3Q06418 890 aa9.35□□□□□ -0.91
LTBP1-202ENST00000404525 ZNF772Q68DY9 489 aaPredicted RBP9.35□□□□□ -0.91
LTBP1-202ENST00000404525 PLEKHF1Q96S99 279 aa9.35□□□□□ -0.91
LTBP1-202ENST00000404525 SH2B1Q9NRF2 756 aaPredicted RBP9.35□□□□□ -0.91
LTBP1-202ENST00000404525 CWC25Q9NXE8 425 aaPredicted RBP9.35□□□□□ -0.91
LTBP1-202ENST00000404525 GOLGA6L7A0A1B0GV03 622 aa9.35□□□□□ -0.91
LTBP1-202ENST00000404525 ZNF165P49910 485 aa9.35□□□□□ -0.91
LTBP1-202ENST00000404525 ANO6Q4KMQ2 910 aa9.35□□□□□ -0.91
LTBP1-202ENST00000404525 GBP3Q9H0R5 595 aa9.35□□□□□ -0.91
LTBP1-202ENST00000404525 SLC52A2Q9HAB3 445 aa9.35□□□□□ -0.91
LTBP1-202ENST00000404525 TRMT1Q9NXH9 659 aaKnown RBP9.35□□□□□ -0.91
LTBP1-202ENST00000404525 DDX41Q9UJV9 622 aaKnown RBP9.35□□□□□ -0.91
LTBP1-202ENST00000404525 PI4KAP2A4QPH2 592 aa9.35□□□□□ -0.91
LTBP1-202ENST00000404525 ERVV-2B6SEH9 535 aa9.35□□□□□ -0.91
LTBP1-202ENST00000404525 SLU7O95391 586 aaKnown RBP9.35□□□□□ -0.91
LTBP1-202ENST00000404525 DNM1Q05193 864 aaKnown RBP9.35□□□□□ -0.91
LTBP1-202ENST00000404525 CUL4AQ13619 759 aa9.35□□□□□ -0.91
LTBP1-202ENST00000404525 TERF2Q15554 542 aa9.35□□□□□ -0.91
LTBP1-202ENST00000404525 LUZP1Q86V48 1076 aa9.35□□□□□ -0.91
LTBP1-202ENST00000404525 NUTM1Q86Y26 1132 aa9.35□□□□□ -0.91
LTBP1-202ENST00000404525 PI4KAP1Q8N8J0 262 aa9.35□□□□□ -0.91
LTBP1-202ENST00000404525 C8orf58Q8NAV2 365 aa9.35□□□□□ -0.91
LTBP1-202ENST00000404525 DDX19AQ9NUU7 478 aaKnown RBP9.35□□□□□ -0.91
LTBP1-202ENST00000404525 HOXB7P09629 217 aa9.35□□□□□ -0.91
LTBP1-202ENST00000404525 GJB2P29033 226 aa9.35□□□□□ -0.91
LTBP1-202ENST00000404525 FAM193AP78312 1265 aa9.35□□□□□ -0.91
LTBP1-202ENST00000404525 ERO1AQ96HE7 468 aa9.35□□□□□ -0.91
LTBP1-202ENST00000404525 MYO3AQ8NEV4 1616 aa9.34□□□□□ -0.91
LTBP1-202ENST00000404525 TSHZ3Q63HK5 1081 aa9.34□□□□□ -0.91
LTBP1-202ENST00000404525 ZNF790Q6PG37 636 aa9.34□□□□□ -0.91
LTBP1-202ENST00000404525 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.34□□□□□ -0.91
LTBP1-202ENST00000404525 IGSF1Q8N6C5 1336 aa9.34□□□□□ -0.91
LTBP1-202ENST00000404525 POLR3GO15318 223 aaPredicted RBP9.34□□□□□ -0.91
LTBP1-202ENST00000404525 SYT1P21579 422 aa9.34□□□□□ -0.91
LTBP1-202ENST00000404525 NUP133Q8WUM0 1156 aa9.34□□□□□ -0.91
LTBP1-202ENST00000404525 C3P01024 1663 aa9.34□□□□□ -0.91
LTBP1-202ENST00000404525 SFPQP23246 707 aaKnown RBP eCLIP9.34□□□□□ -0.91
LTBP1-202ENST00000404525 LARP6Q9BRS8 491 aaKnown RBP9.34□□□□□ -0.91
LTBP1-202ENST00000404525 BMP2KQ9NSY1 1161 aaPredicted RBP9.34□□□□□ -0.91
LTBP1-202ENST00000404525 PTPRUQ92729 1446 aa9.34□□□□□ -0.91
LTBP1-202ENST00000404525 ERBB3P21860 1342 aa9.34□□□□□ -0.91
LTBP1-202ENST00000404525 ARHGAP23Q9P227 1491 aa9.34□□□□□ -0.91
LTBP1-202ENST00000404525 CTIFO43310 598 aaKnown RBP9.34□□□□□ -0.91
LTBP1-202ENST00000404525 CAVIN2O95810 425 aa9.34□□□□□ -0.91
LTBP1-202ENST00000404525 SKILP12757 684 aa9.34□□□□□ -0.91
LTBP1-202ENST00000404525 FERMT3Q86UX7 667 aa9.34□□□□□ -0.91
LTBP1-202ENST00000404525 XAGE3Q8WTP9 111 aa9.34□□□□□ -0.91
LTBP1-202ENST00000404525 SOGA3Q5TF21 947 aa9.33□□□□□ -0.92
LTBP1-202ENST00000404525 ANO10Q9NW15 660 aa9.33□□□□□ -0.92
LTBP1-202ENST00000404525 IQGAP1P46940 1657 aa9.33□□□□□ -0.92
LTBP1-202ENST00000404525 EPB41L2O43491 1005 aaKnown RBP9.33□□□□□ -0.92
LTBP1-202ENST00000404525 GPTP24298 496 aa9.33□□□□□ -0.92
LTBP1-202ENST00000404525 IFIT5Q13325 482 aaKnown RBP9.33□□□□□ -0.92
LTBP1-202ENST00000404525 ARHGAP29Q52LW3 1261 aa9.33□□□□□ -0.92
LTBP1-202ENST00000404525 KSR2Q6VAB6 950 aa9.33□□□□□ -0.92
LTBP1-202ENST00000404525 COPS6Q7L5N1 327 aa9.33□□□□□ -0.92
LTBP1-202ENST00000404525 TMEM51Q9NW97 253 aa9.33□□□□□ -0.92
LTBP1-202ENST00000404525 RTCBQ9Y3I0 505 aaKnown RBP9.33□□□□□ -0.92
LTBP1-202ENST00000404525 USP31Q70CQ4 1352 aa9.33□□□□□ -0.92
LTBP1-202ENST00000404525 PHKG2P15735 406 aa9.33□□□□□ -0.92
LTBP1-202ENST00000404525 IRX5P78411 483 aaPredicted RBP9.33□□□□□ -0.92
LTBP1-202ENST00000404525 MEIS3Q99687 375 aa9.33□□□□□ -0.92
LTBP1-202ENST00000404525 UBAC1Q9BSL1 405 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms