RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 LMBRD1Q9NUN5 540 aa19.23■□□□□ 0.67
CHRFAM7A-203ENST00000401522 PARP3Q9Y6F1 533 aa19.23■□□□□ 0.67
CHRFAM7A-203ENST00000401522 TRIM6-TRIM34B2RNG4 842 aa19.22■□□□□ 0.67
CHRFAM7A-203ENST00000401522 NEK4P51957 841 aa19.22■□□□□ 0.67
CHRFAM7A-203ENST00000401522 FOXO4P98177 505 aa19.22■□□□□ 0.67
CHRFAM7A-203ENST00000401522 PRR5LQ6MZQ0 368 aa19.22■□□□□ 0.67
CHRFAM7A-203ENST00000401522 CNBD1Q8NA66 436 aa19.22■□□□□ 0.67
CHRFAM7A-203ENST00000401522 ZNF445P59923 1031 aa19.21■□□□□ 0.67
CHRFAM7A-203ENST00000401522 POLA2Q14181 598 aa19.21■□□□□ 0.67
CHRFAM7A-203ENST00000401522 EPHA10Q5JZY3 1008 aa19.21■□□□□ 0.67
CHRFAM7A-203ENST00000401522 RILPL2Q969X0 211 aa19.21■□□□□ 0.67
CHRFAM7A-203ENST00000401522 BICC1Q9H694 974 aaKnown RBP19.21■□□□□ 0.67
CHRFAM7A-203ENST00000401522 NRXN2Q9P2S2 1712 aa19.21■□□□□ 0.67
CHRFAM7A-203ENST00000401522 PDE8AO60658 829 aa19.21■□□□□ 0.67
CHRFAM7A-203ENST00000401522 ZBTB7AO95365 584 aa19.21■□□□□ 0.67
CHRFAM7A-203ENST00000401522 PKP1Q13835 747 aa19.21■□□□□ 0.67
CHRFAM7A-203ENST00000401522 RABL6Q3YEC7 729 aaPredicted RBP19.21■□□□□ 0.67
CHRFAM7A-203ENST00000401522 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.21■□□□□ 0.67
CHRFAM7A-203ENST00000401522 MTX1Q13505 466 aa19.2■□□□□ 0.66
CHRFAM7A-203ENST00000401522 CUL4AQ13619 759 aa19.2■□□□□ 0.66
CHRFAM7A-203ENST00000401522 TMX3Q96JJ7 454 aa19.2■□□□□ 0.66
CHRFAM7A-203ENST00000401522 ANO2Q9NQ90 1003 aa19.2■□□□□ 0.66
CHRFAM7A-203ENST00000401522 NPHP1O15259 732 aa19.19■□□□□ 0.66
CHRFAM7A-203ENST00000401522 HCLS1P14317 486 aaPredicted RBP19.19■□□□□ 0.66
CHRFAM7A-203ENST00000401522 ZDHHC9Q9Y397 364 aa19.19■□□□□ 0.66
CHRFAM7A-203ENST00000401522 CSF1RP07333 972 aa19.19■□□□□ 0.66
CHRFAM7A-203ENST00000401522 INTS4Q96HW7 963 aaKnown RBP19.19■□□□□ 0.66
CHRFAM7A-203ENST00000401522 ABCC12Q96J65 1359 aa19.19■□□□□ 0.66
CHRFAM7A-203ENST00000401522 DDX60Q8IY21 1712 aaKnown RBP19.19■□□□□ 0.66
CHRFAM7A-203ENST00000401522 RIC1Q4ADV7 1423 aa19.18■□□□□ 0.66
CHRFAM7A-203ENST00000401522 ST5P78524 1137 aa19.18■□□□□ 0.66
CHRFAM7A-203ENST00000401522 CCDC173Q0VFZ6 552 aa19.18■□□□□ 0.66
CHRFAM7A-203ENST00000401522 TRIM44Q96DX7 344 aaPredicted RBP19.18■□□□□ 0.66
CHRFAM7A-203ENST00000401522 LAMB2P55268 1798 aa19.18■□□□□ 0.66
CHRFAM7A-203ENST00000401522 NASPP49321 788 aaPredicted RBP19.17■□□□□ 0.66
CHRFAM7A-203ENST00000401522 CTSWP56202 376 aa19.17■□□□□ 0.66
CHRFAM7A-203ENST00000401522 LMBR1LQ6UX01 489 aa19.17■□□□□ 0.66
CHRFAM7A-203ENST00000401522 TTLL11Q8NHH1 800 aa19.17■□□□□ 0.66
CHRFAM7A-203ENST00000401522 ATF5Q9Y2D1 282 aaPredicted RBP19.17■□□□□ 0.66
CHRFAM7A-203ENST00000401522 SURF6O75683 361 aaKnown RBP19.17■□□□□ 0.66
CHRFAM7A-203ENST00000401522 CCDC24Q8N4L8 307 aa19.17■□□□□ 0.66
CHRFAM7A-203ENST00000401522 ANP32BQ92688 251 aaKnown RBP19.17■□□□□ 0.66
CHRFAM7A-203ENST00000401522 KIF1BPQ96EK5 621 aa19.17■□□□□ 0.66
CHRFAM7A-203ENST00000401522 NLRP3Q96P20 1036 aa19.17■□□□□ 0.66
CHRFAM7A-203ENST00000401522 PALD1Q9ULE6 856 aa19.17■□□□□ 0.66
CHRFAM7A-203ENST00000401522 AK9Q5TCS8 1911 aa19.17■□□□□ 0.66
CHRFAM7A-203ENST00000401522 ESPNB1AK53 854 aa19.16■□□□□ 0.66
CHRFAM7A-203ENST00000401522 SF3B3Q15393 1217 aaKnown RBP19.16■□□□□ 0.66
CHRFAM7A-203ENST00000401522 HSP90AB4PQ58FF6 505 aa19.16■□□□□ 0.66
CHRFAM7A-203ENST00000401522 RHPN1Q8TCX5 695 aa19.16■□□□□ 0.66
CHRFAM7A-203ENST00000401522 PPP1R9BQ96SB3 815 aa19.16■□□□□ 0.66
CHRFAM7A-203ENST00000401522 ZSCAN23Q3MJ62 389 aa19.15■□□□□ 0.66
CHRFAM7A-203ENST00000401522 CAVIN1Q6NZI2 390 aaKnown RBP19.15■□□□□ 0.66
CHRFAM7A-203ENST00000401522 SGIP1Q9BQI5 828 aa19.15■□□□□ 0.66
CHRFAM7A-203ENST00000401522 BRIP1Q9BX63 1249 aa19.15■□□□□ 0.66
CHRFAM7A-203ENST00000401522 IL1RAPL2Q9NP60 686 aa19.15■□□□□ 0.66
CHRFAM7A-203ENST00000401522 MYH3P11055 1940 aa19.15■□□□□ 0.66
CHRFAM7A-203ENST00000401522 KLRG2A4D1S0 409 aaPredicted RBP19.15■□□□□ 0.66
CHRFAM7A-203ENST00000401522 SRGAP3O43295 1099 aa19.15■□□□□ 0.66
CHRFAM7A-203ENST00000401522 NCLP19338 710 aaKnown RBP19.15■□□□□ 0.66
CHRFAM7A-203ENST00000401522 POLD1P28340 1107 aa19.15■□□□□ 0.66
CHRFAM7A-203ENST00000401522 PRPF40AO75400 957 aaKnown RBP19.14■□□□□ 0.65
CHRFAM7A-203ENST00000401522 C3orf67Q6ZVT6 689 aa19.14■□□□□ 0.65
CHRFAM7A-203ENST00000401522 BRD1O95696 1058 aa19.13■□□□□ 0.65
CHRFAM7A-203ENST00000401522 HSPA4P34932 840 aa19.13■□□□□ 0.65
CHRFAM7A-203ENST00000401522 CCDC152Q4G0S7 254 aa19.13■□□□□ 0.65
CHRFAM7A-203ENST00000401522 PI4K2BQ8TCG2 481 aa19.13■□□□□ 0.65
CHRFAM7A-203ENST00000401522 PTGER2P43116 358 aa19.13■□□□□ 0.65
CHRFAM7A-203ENST00000401522 CRY2Q49AN0 593 aa19.13■□□□□ 0.65
CHRFAM7A-203ENST00000401522 RTL9Q8NET4 1388 aa19.13■□□□□ 0.65
CHRFAM7A-203ENST00000401522 GREM2Q9H772 168 aa19.12■□□□□ 0.65
CHRFAM7A-203ENST00000401522 TNRC6CQ9HCJ0 1690 aaKnown RBP19.12■□□□□ 0.65
CHRFAM7A-203ENST00000401522 MBD3O95983 291 aa19.12■□□□□ 0.65
CHRFAM7A-203ENST00000401522 PDE6BP35913 854 aa19.12■□□□□ 0.65
CHRFAM7A-203ENST00000401522 RFX5P48382 616 aaPredicted RBP19.12■□□□□ 0.65
CHRFAM7A-203ENST00000401522 CNTROBQ8N137 903 aa19.12■□□□□ 0.65
CHRFAM7A-203ENST00000401522 GPT2Q8TD30 523 aa19.12■□□□□ 0.65
CHRFAM7A-203ENST00000401522 CHMP3Q9Y3E7 222 aa19.12■□□□□ 0.65
CHRFAM7A-203ENST00000401522 IFIT5Q13325 482 aaKnown RBP19.11■□□□□ 0.65
CHRFAM7A-203ENST00000401522 CCDC57Q2TAC2 916 aa19.11■□□□□ 0.65
CHRFAM7A-203ENST00000401522 CCDC85AQ96PX6 553 aaPredicted RBP19.11■□□□□ 0.65
CHRFAM7A-203ENST00000401522 SPON1Q9HCB6 807 aa19.11■□□□□ 0.65
CHRFAM7A-203ENST00000401522 RAD50Q92878 1312 aa19.11■□□□□ 0.65
CHRFAM7A-203ENST00000401522 ANKRD31Q8N7Z5 1873 aa19.11■□□□□ 0.65
CHRFAM7A-203ENST00000401522 SGSM2O43147 1006 aa19.1■□□□□ 0.65
CHRFAM7A-203ENST00000401522 ITGA6P23229 1130 aa19.1■□□□□ 0.65
CHRFAM7A-203ENST00000401522 TTC41PQ6P2S7 1318 aa19.1■□□□□ 0.65
CHRFAM7A-203ENST00000401522 COPRSQ9NQ92 184 aa19.1■□□□□ 0.65
CHRFAM7A-203ENST00000401522 C10orf71Q711Q0 1435 aa19.09■□□□□ 0.65
CHRFAM7A-203ENST00000401522 ANKRD18BA2A2Z9 1011 aa19.09■□□□□ 0.65
CHRFAM7A-203ENST00000401522 PTPN12Q05209 780 aaKnown RBP19.09■□□□□ 0.65
CHRFAM7A-203ENST00000401522 HOXA10P31260 410 aaPredicted RBP19.08■□□□□ 0.65
CHRFAM7A-203ENST00000401522 UPF3BQ9BZI7 483 aaKnown RBP19.08■□□□□ 0.64
CHRFAM7A-203ENST00000401522 IL25Q9H293 177 aa19.08■□□□□ 0.64
CHRFAM7A-203ENST00000401522 SEC31BQ9NQW1 1179 aa19.08■□□□□ 0.64
CHRFAM7A-203ENST00000401522 GLRX3O76003 335 aaKnown RBP19.07■□□□□ 0.64
CHRFAM7A-203ENST00000401522 SRGNP10124 158 aa19.07■□□□□ 0.64
CHRFAM7A-203ENST00000401522 KIF13BQ9NQT8 1826 aa19.06■□□□□ 0.64
CHRFAM7A-203ENST00000401522 DDX46Q7L014 1031 aaKnown RBP19.06■□□□□ 0.64
CHRFAM7A-203ENST00000401522 KLHDC4Q8TBB5 520 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms