RNA–Protein interactions for RNA: ENST00000399537.8

TNRC18-203, Transcript of trinucleotide repeat containing 18, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNRC18, Length 10,572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-203ENST00000399537 RSPH14Q9UHP6 348 aa16.38■□□□□ 0.21
TNRC18-203ENST00000399537 NOLC1Q14978 699 aaKnown RBP eCLIP16.38■□□□□ 0.21
TNRC18-203ENST00000399537 CCDC50Q8IVM0 306 aa16.38■□□□□ 0.21
TNRC18-203ENST00000399537 SMC6Q96SB8 1091 aa16.38■□□□□ 0.21
TNRC18-203ENST00000399537 HEATR3Q7Z4Q2 680 aa16.38■□□□□ 0.21
TNRC18-203ENST00000399537 CCDC129Q6ZRS4 1044 aa16.38■□□□□ 0.21
TNRC18-203ENST00000399537 CCDC121Q6ZUS5 278 aa16.38■□□□□ 0.21
TNRC18-203ENST00000399537 CABP5Q9NP86 173 aa16.38■□□□□ 0.21
TNRC18-203ENST00000399537 PIK3R4Q99570 1358 aa16.38■□□□□ 0.21
TNRC18-203ENST00000399537 CYLC1P35663 651 aaPredicted RBP16.38■□□□□ 0.21
TNRC18-203ENST00000399537 MAP7D1Q3KQU3 841 aa16.38■□□□□ 0.21
TNRC18-203ENST00000399537 FAM200AQ8TCP9 573 aa16.38■□□□□ 0.21
TNRC18-203ENST00000399537 TTC14Q96N46 770 aa16.38■□□□□ 0.21
TNRC18-203ENST00000399537 SPAG5Q96R06 1193 aa16.37■□□□□ 0.21
TNRC18-203ENST00000399537 OPA1O60313 960 aa16.37■□□□□ 0.21
TNRC18-203ENST00000399537 ODF2LQ9ULJ1 636 aa16.37■□□□□ 0.21
TNRC18-203ENST00000399537 GTF2A1P52655 376 aaPredicted RBP16.37■□□□□ 0.21
TNRC18-203ENST00000399537 MCM6Q14566 821 aa16.37■□□□□ 0.21
TNRC18-203ENST00000399537 CCDC77Q9BR77 488 aa16.37■□□□□ 0.21
TNRC18-203ENST00000399537 NOL3O60936 208 aaKnown RBP16.37■□□□□ 0.21
TNRC18-203ENST00000399537 TERF1P54274 439 aa16.37■□□□□ 0.21
TNRC18-203ENST00000399537 SELENOSQ9BQE4 189 aa16.37■□□□□ 0.21
TNRC18-203ENST00000399537 WTAPQ15007 396 aa16.37■□□□□ 0.21
TNRC18-203ENST00000399537 UNC13AQ9UPW8 1703 aa16.37■□□□□ 0.21
TNRC18-203ENST00000399537 CFAP58Q5T655 872 aa16.37■□□□□ 0.21
TNRC18-203ENST00000399537 ASIC1P78348 528 aa16.36■□□□□ 0.21
TNRC18-203ENST00000399537 USP48Q86UV5 1035 aa16.36■□□□□ 0.21
TNRC18-203ENST00000399537 DBF4Q9UBU7 674 aaPredicted RBP16.36■□□□□ 0.21
TNRC18-203ENST00000399537 IGHDP01880 384 aa16.36■□□□□ 0.21
TNRC18-203ENST00000399537 PTGS1P23219 599 aa16.36■□□□□ 0.21
TNRC18-203ENST00000399537 ARID5AQ03989 594 aa16.36■□□□□ 0.21
TNRC18-203ENST00000399537 ZSCAN16Q9H4T2 348 aaPredicted RBP16.36■□□□□ 0.21
TNRC18-203ENST00000399537 TSPY3P0CV98 308 aa16.36■□□□□ 0.21
TNRC18-203ENST00000399537 TSPY8P0CW00 308 aa16.36■□□□□ 0.21
TNRC18-203ENST00000399537 CTAGE15A4D2H0 777 aa16.36■□□□□ 0.21
TNRC18-203ENST00000399537 CTAGE8P0CG41 777 aa16.36■□□□□ 0.21
TNRC18-203ENST00000399537 CTAGE6Q86UF2 777 aa16.36■□□□□ 0.21
TNRC18-203ENST00000399537 CTAGE4Q8IX94 777 aa16.36■□□□□ 0.21
TNRC18-203ENST00000399537 KRT23Q9C075 422 aa16.36■□□□□ 0.21
TNRC18-203ENST00000399537 CAPZA3Q96KX2 299 aa16.36■□□□□ 0.21
TNRC18-203ENST00000399537 FLIIQ13045 1269 aa16.35■□□□□ 0.21
TNRC18-203ENST00000399537 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.35■□□□□ 0.214e-7■■□□□ 12.4
TNRC18-203ENST00000399537 V9GYY5 206 aaPredicted RBP16.35■□□□□ 0.21
TNRC18-203ENST00000399537 RPRD2Q5VT52 1461 aaKnown RBP16.35■□□□□ 0.21
TNRC18-203ENST00000399537 ATP2A1O14983 1001 aa16.35■□□□□ 0.21
TNRC18-203ENST00000399537 SNRKQ9NRH2 765 aa16.35■□□□□ 0.21
TNRC18-203ENST00000399537 ST5P78524 1137 aa16.35■□□□□ 0.21
TNRC18-203ENST00000399537 DDX46Q7L014 1031 aaKnown RBP16.35■□□□□ 0.21
TNRC18-203ENST00000399537 BMP15O95972 392 aa16.35■□□□□ 0.21
TNRC18-203ENST00000399537 SYT1P21579 422 aa16.35■□□□□ 0.21
TNRC18-203ENST00000399537 RTN1Q16799 776 aa16.35■□□□□ 0.21
TNRC18-203ENST00000399537 UBE3BQ7Z3V4 1068 aa16.35■□□□□ 0.21
TNRC18-203ENST00000399537 CCDC61Q9Y6R9 512 aa16.35■□□□□ 0.21
TNRC18-203ENST00000399537 KCNG4Q8TDN1 519 aa16.35■□□□□ 0.21
TNRC18-203ENST00000399537 GOLGA1Q92805 767 aa16.35■□□□□ 0.21
TNRC18-203ENST00000399537 TMX3Q96JJ7 454 aa16.35■□□□□ 0.21
TNRC18-203ENST00000399537 TACC1O75410 805 aa16.35■□□□□ 0.21
TNRC18-203ENST00000399537 HSP90AA4PQ58FG1 418 aa16.35■□□□□ 0.21
TNRC18-203ENST00000399537 IFIT1BQ5T764 474 aaKnown RBP16.35■□□□□ 0.21
TNRC18-203ENST00000399537 TPD52P55327 224 aaPredicted RBP16.34■□□□□ 0.21
TNRC18-203ENST00000399537 ATRIPQ8WXE1 791 aa16.34■□□□□ 0.21
TNRC18-203ENST00000399537 IMPG2Q9BZV3 1241 aa16.34■□□□□ 0.21
TNRC18-203ENST00000399537 ZBTB3Q9H5J0 574 aa16.34■□□□□ 0.21
TNRC18-203ENST00000399537 DNAI1Q9UI46 699 aa16.34■□□□□ 0.21
TNRC18-203ENST00000399537 LDHCP07864 332 aa16.34■□□□□ 0.21
TNRC18-203ENST00000399537 NEK1Q96PY6 1258 aa16.34■□□□□ 0.21
TNRC18-203ENST00000399537 MBIPQ9NS73 344 aa16.34■□□□□ 0.21
TNRC18-203ENST00000399537 NDC80O14777 642 aa16.34■□□□□ 0.21
TNRC18-203ENST00000399537 SH3BP5O60239 455 aa16.34■□□□□ 0.21
TNRC18-203ENST00000399537 THOC2Q8NI27 1593 aaKnown RBP16.34■□□□□ 0.21
TNRC18-203ENST00000399537 TTC21BQ7Z4L5 1316 aa16.34■□□□□ 0.21
TNRC18-203ENST00000399537 NME9Q86XW9 330 aa16.34■□□□□ 0.21
TNRC18-203ENST00000399537 AOPEPQ8N6M6 819 aa16.33■□□□□ 0.21
TNRC18-203ENST00000399537 CALM1P0DP23 149 aa16.33■□□□□ 0.21
TNRC18-203ENST00000399537 CALM2P0DP24 149 aa16.33■□□□□ 0.21
TNRC18-203ENST00000399537 CALM3P0DP25 149 aa16.33■□□□□ 0.21
TNRC18-203ENST00000399537 TYRO3Q06418 890 aa16.33■□□□□ 0.21
TNRC18-203ENST00000399537 HDAC1Q13547 482 aaPredicted RBP16.33■□□□□ 0.21
TNRC18-203ENST00000399537 SEPT6Q14141 434 aa16.33■□□□□ 0.21
TNRC18-203ENST00000399537 DPH6Q7L8W6 267 aa16.33■□□□□ 0.21
TNRC18-203ENST00000399537 LMBR1Q8WVP7 490 aa16.33■□□□□ 0.2
TNRC18-203ENST00000399537 EMILIN1Q9Y6C2 1016 aa16.33■□□□□ 0.2
TNRC18-203ENST00000399537 PPP1R42Q7Z4L9 355 aa16.33■□□□□ 0.2
TNRC18-203ENST00000399537 RTL1A6NKG5 1358 aa16.33■□□□□ 0.2
TNRC18-203ENST00000399537 ABCC5O15440 1437 aa16.33■□□□□ 0.2
TNRC18-203ENST00000399537 SMIM23A6NLE4 172 aa16.32■□□□□ 0.2
TNRC18-203ENST00000399537 CCDC14Q49A88 953 aa16.32■□□□□ 0.2
TNRC18-203ENST00000399537 ADAMTS2O95450 1211 aa16.32■□□□□ 0.2
TNRC18-203ENST00000399537 SDSP20132 328 aa16.32■□□□□ 0.2
TNRC18-203ENST00000399537 NBPF6Q5VWK0 638 aa16.32■□□□□ 0.2
TNRC18-203ENST00000399537 NBPF5PQ86XG9 351 aaPredicted RBP16.32■□□□□ 0.2
TNRC18-203ENST00000399537 MRPS27Q92552 414 aaKnown RBP16.32■□□□□ 0.2
TNRC18-203ENST00000399537 NBPF4Q96M43 638 aa16.32■□□□□ 0.2
TNRC18-203ENST00000399537 NECAB1Q8N987 351 aa16.32■□□□□ 0.2
TNRC18-203ENST00000399537 BIVM-ERCC5R4GMW8 1640 aa16.32■□□□□ 0.2
TNRC18-203ENST00000399537 KDM5AP29375 1690 aaKnown RBP16.32■□□□□ 0.2
TNRC18-203ENST00000399537 ZBTB43O43298 467 aa16.32■□□□□ 0.2
TNRC18-203ENST00000399537 MAPKBP1O60336 1514 aa16.32■□□□□ 0.2
TNRC18-203ENST00000399537 KLF18A0A0U1RQI7 1052 aa16.32■□□□□ 0.2
TNRC18-203ENST00000399537 CFAP157Q5JU67 520 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms