RNA–Protein interactions for RNA: ENST00000398958.6

RCC1-204, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RCC1, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-204ENST00000398958 CUL4AQ13619 759 aa13.45□□□□□ -0.26
RCC1-204ENST00000398958 USP48Q86UV5 1035 aa13.45□□□□□ -0.26
RCC1-204ENST00000398958 FAM184AQ8NB25 1140 aa13.45□□□□□ -0.26
RCC1-204ENST00000398958 RBM8AQ9Y5S9 174 aaKnown RBP13.45□□□□□ -0.26
RCC1-204ENST00000398958 PCNTO95613 3336 aa13.45□□□□□ -0.26
RCC1-204ENST00000398958 STK3Q13188 491 aa13.44□□□□□ -0.26
RCC1-204ENST00000398958 TRMT112Q9UI30 125 aaKnown RBP13.44□□□□□ -0.26
RCC1-204ENST00000398958 GTF2F1P35269 517 aaKnown RBP eCLIP13.44□□□□□ -0.267e-7■■□□□ 12.5
RCC1-204ENST00000398958 KIF6Q6ZMV9 814 aa13.44□□□□□ -0.26
RCC1-204ENST00000398958 ERC1Q8IUD2 1116 aa13.44□□□□□ -0.26
RCC1-204ENST00000398958 SIPA1L3O60292 1781 aaPredicted RBP13.44□□□□□ -0.26
RCC1-204ENST00000398958 N4BP2Q86UW6 1770 aaPredicted RBP13.43□□□□□ -0.26
RCC1-204ENST00000398958 STARD3NLO95772 234 aa13.43□□□□□ -0.26
RCC1-204ENST00000398958 ANAPC15P60006 121 aa13.43□□□□□ -0.26
RCC1-204ENST00000398958 PLCB2Q00722 1185 aa13.43□□□□□ -0.26
RCC1-204ENST00000398958 ATP2B3Q16720 1220 aa13.43□□□□□ -0.26
RCC1-204ENST00000398958 DZIP3Q86Y13 1208 aaKnown RBP13.43□□□□□ -0.26
RCC1-204ENST00000398958 EVI5LQ96CN4 794 aa13.43□□□□□ -0.26
RCC1-204ENST00000398958 ITPK1Q13572 414 aa13.43□□□□□ -0.26
RCC1-204ENST00000398958 TAF5LO75529 589 aa13.42□□□□□ -0.26
RCC1-204ENST00000398958 ADORA1P30542 326 aa13.42□□□□□ -0.26
RCC1-204ENST00000398958 HSPA1LP34931 641 aa13.42□□□□□ -0.26
RCC1-204ENST00000398958 RFX5P48382 616 aaPredicted RBP13.42□□□□□ -0.26
RCC1-204ENST00000398958 LRRC2Q9BYS8 371 aa13.42□□□□□ -0.26
RCC1-204ENST00000398958 BCL2L12Q9HB09 334 aa13.42□□□□□ -0.26
RCC1-204ENST00000398958 PDRG1Q9NUG6 133 aa13.42□□□□□ -0.26
RCC1-204ENST00000398958 SCN11AQ9UI33 1791 aa13.42□□□□□ -0.26
RCC1-204ENST00000398958 UTYO14607 1347 aa13.42□□□□□ -0.26
RCC1-204ENST00000398958 GOLIM4O00461 696 aa13.42□□□□□ -0.26
RCC1-204ENST00000398958 KDM4AO75164 1064 aa13.42□□□□□ -0.26
RCC1-204ENST00000398958 TNNI3KQ59H18 835 aa13.42□□□□□ -0.26
RCC1-204ENST00000398958 GORABQ5T7V8 394 aa13.42□□□□□ -0.26
RCC1-204ENST00000398958 INTS4Q96HW7 963 aaKnown RBP13.42□□□□□ -0.26
RCC1-204ENST00000398958 TTC14Q96N46 770 aa13.42□□□□□ -0.26
RCC1-204ENST00000398958 USP21Q9UK80 565 aa13.42□□□□□ -0.26
RCC1-204ENST00000398958 CNPY2Q9Y2B0 182 aa13.42□□□□□ -0.26
RCC1-204ENST00000398958 FPGT-TNNI3KV9GXZ4 949 aa13.42□□□□□ -0.26
RCC1-204ENST00000398958 TCHHQ07283 1943 aa13.42□□□□□ -0.26
RCC1-204ENST00000398958 CCDC171Q6TFL3 1326 aa13.42□□□□□ -0.26
RCC1-204ENST00000398958 CREB3L3Q68CJ9 461 aa13.41□□□□□ -0.26
RCC1-204ENST00000398958 GTPBP4Q9BZE4 634 aaKnown RBP13.41□□□□□ -0.26
RCC1-204ENST00000398958 GREM2Q9H772 168 aa13.41□□□□□ -0.26
RCC1-204ENST00000398958 JAG2Q9Y219 1238 aa13.41□□□□□ -0.26
RCC1-204ENST00000398958 A0A0G2JLW4 131 aa13.41□□□□□ -0.26
RCC1-204ENST00000398958 SPDYE4A6NLX3 237 aa13.41□□□□□ -0.26
RCC1-204ENST00000398958 CCDC183Q5T5S1 534 aa13.41□□□□□ -0.26
RCC1-204ENST00000398958 RUFY2Q8WXA3 655 aa13.41□□□□□ -0.26
RCC1-204ENST00000398958 NPHP1O15259 732 aa13.41□□□□□ -0.26
RCC1-204ENST00000398958 CRKLP46109 303 aaKnown RBP13.41□□□□□ -0.26
RCC1-204ENST00000398958 FOSBP53539 338 aa13.41□□□□□ -0.26
RCC1-204ENST00000398958 FOXO4P98177 505 aa13.41□□□□□ -0.26
RCC1-204ENST00000398958 FAM173BQ6P4H8 233 aa13.41□□□□□ -0.26
RCC1-204ENST00000398958 FERMT3Q86UX7 667 aa13.41□□□□□ -0.26
RCC1-204ENST00000398958 SEC31BQ9NQW1 1179 aa13.41□□□□□ -0.26
RCC1-204ENST00000398958 SPTLC3Q9NUV7 552 aa13.41□□□□□ -0.26
RCC1-204ENST00000398958 NAP1L2Q9ULW6 460 aaPredicted RBP13.41□□□□□ -0.26
RCC1-204ENST00000398958 SPATA31A1Q5TZJ5 1347 aa13.4□□□□□ -0.26
RCC1-204ENST00000398958 WDR33Q9C0J8 1336 aaKnown RBP13.4□□□□□ -0.26
RCC1-204ENST00000398958 USP42Q9H9J4 1324 aaKnown RBP13.4□□□□□ -0.26
RCC1-204ENST00000398958 CYP19A1P11511 503 aaPredicted RBP13.4□□□□□ -0.26
RCC1-204ENST00000398958 ME3Q16798 604 aa13.4□□□□□ -0.26
RCC1-204ENST00000398958 CCDC57Q2TAC2 916 aa13.4□□□□□ -0.26
RCC1-204ENST00000398958 PDCL2Q8N4E4 241 aa13.4□□□□□ -0.26
RCC1-204ENST00000398958 SRP68Q9UHB9 627 aaKnown RBP13.4□□□□□ -0.26
RCC1-204ENST00000398958 LIMCH1Q9UPQ0 1083 aa13.4□□□□□ -0.26
RCC1-204ENST00000398958 LOC102724428A0A0B4J2F2 783 aa13.4□□□□□ -0.27
RCC1-204ENST00000398958 VPS37CA5D8V6 355 aaPredicted RBP13.4□□□□□ -0.27
RCC1-204ENST00000398958 SLC27A2O14975 620 aa13.4□□□□□ -0.27
RCC1-204ENST00000398958 SIK1P57059 783 aa13.4□□□□□ -0.27
RCC1-204ENST00000398958 NECTIN1Q15223 517 aa13.4□□□□□ -0.27
RCC1-204ENST00000398958 AMIGO3Q86WK7 504 aa13.4□□□□□ -0.27
RCC1-204ENST00000398958 TPCN1Q9ULQ1 816 aa13.4□□□□□ -0.27
RCC1-204ENST00000398958 RPAP1Q9BWH6 1393 aaPredicted RBP13.39□□□□□ -0.27
RCC1-204ENST00000398958 FIBPO43427 364 aa13.39□□□□□ -0.27
RCC1-204ENST00000398958 SYT1P21579 422 aa13.39□□□□□ -0.27
RCC1-204ENST00000398958 GJB2P29033 226 aa13.39□□□□□ -0.27
RCC1-204ENST00000398958 ST3GAL1Q11201 340 aa13.39□□□□□ -0.27
RCC1-204ENST00000398958 SMC3Q9UQE7 1217 aa13.39□□□□□ -0.27
RCC1-204ENST00000398958 CYP46A1Q9Y6A2 500 aa13.39□□□□□ -0.27
RCC1-204ENST00000398958 COL15A1P39059 1388 aa13.39□□□□□ -0.27
RCC1-204ENST00000398958 CHST3Q7LGC8 479 aa13.39□□□□□ -0.27
RCC1-204ENST00000398958 CHMP4CQ96CF2 233 aa13.39□□□□□ -0.27
RCC1-204ENST00000398958 GTF2E1P29083 439 aaPredicted RBP13.38□□□□□ -0.27
RCC1-204ENST00000398958 CASP7P55210 303 aa13.38□□□□□ -0.27
RCC1-204ENST00000398958 CHAF1AQ13111 956 aaPredicted RBP13.38□□□□□ -0.27
RCC1-204ENST00000398958 VPS53Q5VIR6 699 aa13.38□□□□□ -0.27
RCC1-204ENST00000398958 HDAC5Q9UQL6 1122 aa13.38□□□□□ -0.27
RCC1-204ENST00000398958 TCIRG1Q13488 830 aa13.38□□□□□ -0.27
RCC1-204ENST00000398958 COPRSQ9NQ92 184 aa13.38□□□□□ -0.27
RCC1-204ENST00000398958 CNNM1Q9NRU3 951 aa13.38□□□□□ -0.27
RCC1-204ENST00000398958 RIOK3O14730 519 aaKnown RBP13.37□□□□□ -0.27
RCC1-204ENST00000398958 ZKSCAN1P17029 563 aaPredicted RBP13.37□□□□□ -0.27
RCC1-204ENST00000398958 NKX1-1Q15270 411 aaPredicted RBP13.37□□□□□ -0.27
RCC1-204ENST00000398958 LDHAL6AQ6ZMR3 332 aa13.37□□□□□ -0.27
RCC1-204ENST00000398958 RAB11FIP4Q86YS3 637 aa13.37□□□□□ -0.27
RCC1-204ENST00000398958 NIP7Q9Y221 180 aaKnown RBP eCLIP13.37□□□□□ -0.27
RCC1-204ENST00000398958 ABCC6O95255 1503 aa13.37□□□□□ -0.27
RCC1-204ENST00000398958 IRS4O14654 1257 aaPredicted RBP13.37□□□□□ -0.27
RCC1-204ENST00000398958 LETM1O95202 739 aaPredicted RBP13.37□□□□□ -0.27
RCC1-204ENST00000398958 KIF20AO95235 890 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms