RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 GCOM1H8Y6P7 765 aaPredicted RBP10.67□□□□□ -0.7
ATL3-201ENST00000398868 MYZAPP0CAP1 466 aa10.67□□□□□ -0.7
ATL3-201ENST00000398868 BMS1Q14692 1282 aaKnown RBP10.67□□□□□ -0.7
ATL3-201ENST00000398868 SPOUT1Q5T280 376 aaKnown RBP10.67□□□□□ -0.7
ATL3-201ENST00000398868 FBF1Q8TES7 1133 aa10.67□□□□□ -0.7
ATL3-201ENST00000398868 VPS18Q9P253 973 aa10.67□□□□□ -0.7
ATL3-201ENST00000398868 SETD1BQ9UPS6 1966 aaKnown RBP10.67□□□□□ -0.7
ATL3-201ENST00000398868 SMIM23A6NLE4 172 aa10.67□□□□□ -0.7
ATL3-201ENST00000398868 SF3A3Q12874 501 aaKnown RBP eCLIP10.67□□□□□ -0.7
ATL3-201ENST00000398868 KRT32Q14532 448 aa10.67□□□□□ -0.7
ATL3-201ENST00000398868 TXLNBQ8N3L3 684 aa10.67□□□□□ -0.7
ATL3-201ENST00000398868 SMARCC2Q8TAQ2 1214 aa10.67□□□□□ -0.7
ATL3-201ENST00000398868 UTP14AQ9BVJ6 771 aaKnown RBP10.67□□□□□ -0.7
ATL3-201ENST00000398868 TBC1D2Q9BYX2 928 aa10.67□□□□□ -0.7
ATL3-201ENST00000398868 KIF5BP33176 963 aa10.67□□□□□ -0.7
ATL3-201ENST00000398868 FAM89AQ96GI7 184 aa10.67□□□□□ -0.7
ATL3-201ENST00000398868 MEIS3Q99687 375 aa10.67□□□□□ -0.7
ATL3-201ENST00000398868 DMRT2Q9Y5R5 561 aa10.67□□□□□ -0.7
ATL3-201ENST00000398868 IARSP41252 1262 aaKnown RBP10.67□□□□□ -0.7
ATL3-201ENST00000398868 SLFN5Q08AF3 891 aa10.67□□□□□ -0.7
ATL3-201ENST00000398868 FCHSD1Q86WN1 690 aa10.67□□□□□ -0.7
ATL3-201ENST00000398868 ATRIPQ8WXE1 791 aa10.67□□□□□ -0.7
ATL3-201ENST00000398868 ZNF594Q96JF6 807 aaPredicted RBP10.67□□□□□ -0.7
ATL3-201ENST00000398868 EHMT1Q9H9B1 1298 aa10.67□□□□□ -0.7
ATL3-201ENST00000398868 NAPAP54920 295 aa10.67□□□□□ -0.7
ATL3-201ENST00000398868 PDE3AQ14432 1141 aa10.67□□□□□ -0.7
ATL3-201ENST00000398868 NOD1Q9Y239 953 aa10.67□□□□□ -0.7
ATL3-201ENST00000398868 KLF18A0A0U1RQI7 1052 aa10.66□□□□□ -0.7
ATL3-201ENST00000398868 TRIM27P14373 513 aa10.66□□□□□ -0.7
ATL3-201ENST00000398868 MXRA7P84157 204 aa10.66□□□□□ -0.7
ATL3-201ENST00000398868 USH1GQ495M9 461 aa10.66□□□□□ -0.7
ATL3-201ENST00000398868 SPATA24Q86W54 205 aa10.66□□□□□ -0.7
ATL3-201ENST00000398868 GTF3C6Q969F1 213 aa10.66□□□□□ -0.7
ATL3-201ENST00000398868 BACH1O14867 736 aa10.66□□□□□ -0.7
ATL3-201ENST00000398868 GNG11P61952 73 aa10.66□□□□□ -0.7
ATL3-201ENST00000398868 ZSCAN23Q3MJ62 389 aa10.66□□□□□ -0.7
ATL3-201ENST00000398868 KLHDC4Q8TBB5 520 aa10.66□□□□□ -0.7
ATL3-201ENST00000398868 BEGAINQ9BUH8 593 aa10.66□□□□□ -0.7
ATL3-201ENST00000398868 ORC3Q9UBD5 711 aaPredicted RBP10.66□□□□□ -0.7
ATL3-201ENST00000398868 CAPN2P17655 700 aa10.66□□□□□ -0.7
ATL3-201ENST00000398868 HSPA4P34932 840 aa10.66□□□□□ -0.7
ATL3-201ENST00000398868 TNNQ9UQP3 1299 aa10.66□□□□□ -0.7
ATL3-201ENST00000398868 MCM7P33993 719 aa10.66□□□□□ -0.7
ATL3-201ENST00000398868 TNNI2P48788 182 aa10.66□□□□□ -0.7
ATL3-201ENST00000398868 WTAPQ15007 396 aa10.66□□□□□ -0.7
ATL3-201ENST00000398868 DAAM2Q86T65 1068 aa10.66□□□□□ -0.7
ATL3-201ENST00000398868 CPXCR1Q8N123 301 aa10.66□□□□□ -0.7
ATL3-201ENST00000398868 HSF2BPO75031 334 aa10.66□□□□□ -0.7
ATL3-201ENST00000398868 KIF4AO95239 1232 aa10.66□□□□□ -0.7
ATL3-201ENST00000398868 RARSP54136 660 aaKnown RBP10.66□□□□□ -0.7
ATL3-201ENST00000398868 TRAPPC3LQ5T215 181 aa10.66□□□□□ -0.7
ATL3-201ENST00000398868 DDX23Q9BUQ8 820 aaKnown RBP10.66□□□□□ -0.7
ATL3-201ENST00000398868 TCP11L1Q9NUJ3 509 aa10.66□□□□□ -0.7
ATL3-201ENST00000398868 MAGEB6P1A0A0J9YX57 407 aa10.65□□□□□ -0.7
ATL3-201ENST00000398868 MYCLP12524 364 aaPredicted RBP10.65□□□□□ -0.7
ATL3-201ENST00000398868 CNGA1P29973 690 aa10.65□□□□□ -0.7
ATL3-201ENST00000398868 ANO10Q9NW15 660 aa10.65□□□□□ -0.7
ATL3-201ENST00000398868 CCNL1Q9UK58 526 aaPredicted RBP10.65□□□□□ -0.7
ATL3-201ENST00000398868 ABCC5O15440 1437 aa10.65□□□□□ -0.7
ATL3-201ENST00000398868 ZEB2O60315 1214 aa10.65□□□□□ -0.7
ATL3-201ENST00000398868 UBA7P41226 1012 aa10.65□□□□□ -0.7
ATL3-201ENST00000398868 PAFAH1B1P43034 410 aa10.65□□□□□ -0.7
ATL3-201ENST00000398868 KRBA2Q6ZNG9 492 aa10.65□□□□□ -0.7
ATL3-201ENST00000398868 ANO3Q9BYT9 981 aa10.65□□□□□ -0.7
ATL3-201ENST00000398868 ARHGAP27Q6ZUM4 889 aa10.65□□□□□ -0.7
ATL3-201ENST00000398868 IRS4O14654 1257 aaPredicted RBP10.65□□□□□ -0.7
ATL3-201ENST00000398868 UFL1O94874 794 aa10.65□□□□□ -0.7
ATL3-201ENST00000398868 IRX5P78411 483 aaPredicted RBP10.65□□□□□ -0.7
ATL3-201ENST00000398868 CCDC174Q6PII3 467 aa10.65□□□□□ -0.7
ATL3-201ENST00000398868 LRSAM1Q6UWE0 723 aa10.65□□□□□ -0.7
ATL3-201ENST00000398868 HECW1Q76N89 1606 aa10.65□□□□□ -0.7
ATL3-201ENST00000398868 FAM135AQ9P2D6 1515 aa10.65□□□□□ -0.7
ATL3-201ENST00000398868 TTC12Q9H892 705 aaPredicted RBP10.65□□□□□ -0.71
ATL3-201ENST00000398868 ZNF804AQ7Z570 1209 aa10.64□□□□□ -0.71
ATL3-201ENST00000398868 LRPPRCP42704 1394 aaKnown RBP10.64□□□□□ -0.71
ATL3-201ENST00000398868 TBCAO75347 108 aaKnown RBP10.64□□□□□ -0.71
ATL3-201ENST00000398868 RAD51AP2Q09MP3 1159 aa10.64□□□□□ -0.71
ATL3-201ENST00000398868 TOPBP1Q92547 1522 aa10.64□□□□□ -0.71
ATL3-201ENST00000398868 EEF2P13639 858 aaKnown RBP10.64□□□□□ -0.71
ATL3-201ENST00000398868 PPM1EQ8WY54 764 aa10.64□□□□□ -0.71
ATL3-201ENST00000398868 CCDC196A0A1B0GTZ2 297 aa10.64□□□□□ -0.71
ATL3-201ENST00000398868 A0A1W2PRG0 241 aa10.64□□□□□ -0.71
ATL3-201ENST00000398868 PPP2R5CQ13362 524 aa10.64□□□□□ -0.71
ATL3-201ENST00000398868 hCG_1642624A0A1W2PR95 340 aa10.64□□□□□ -0.71
ATL3-201ENST00000398868 CCDC129Q6ZRS4 1044 aa10.64□□□□□ -0.71
ATL3-201ENST00000398868 HOOK3Q86VS8 718 aa10.64□□□□□ -0.71
ATL3-201ENST00000398868 BRF1Q92994 677 aa10.64□□□□□ -0.71
ATL3-201ENST00000398868 RAB34Q9BZG1 259 aa10.64□□□□□ -0.71
ATL3-201ENST00000398868 MCM3P25205 808 aa10.63□□□□□ -0.71
ATL3-201ENST00000398868 GIGYF2Q6Y7W6 1299 aaKnown RBP10.63□□□□□ -0.71
ATL3-201ENST00000398868 RNF41Q9H4P4 317 aaPredicted RBP10.63□□□□□ -0.71
ATL3-201ENST00000398868 PTPDC1A2A3K4 754 aa10.63□□□□□ -0.71
ATL3-201ENST00000398868 IL2RBP14784 551 aa10.63□□□□□ -0.71
ATL3-201ENST00000398868 RNF169Q8NCN4 708 aa10.63□□□□□ -0.71
ATL3-201ENST00000398868 CAPZA3Q96KX2 299 aa10.63□□□□□ -0.71
ATL3-201ENST00000398868 NEK1Q96PY6 1258 aa10.63□□□□□ -0.71
ATL3-201ENST00000398868 NAP1L3Q99457 506 aaPredicted RBP10.63□□□□□ -0.71
ATL3-201ENST00000398868 HGSO14964 777 aaPredicted RBP10.63□□□□□ -0.71
ATL3-201ENST00000398868 PPP2R5DQ14738 602 aa10.63□□□□□ -0.71
ATL3-201ENST00000398868 RPAP2Q8IXW5 612 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms