RNA–Protein interactions for RNA: ENST00000398339.5

TCF4-203, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-203ENST00000398339 CEP120Q8N960 986 aa9.69□□□□□ -0.86
TCF4-203ENST00000398339 CCDC8Q9H0W5 538 aaPredicted RBP9.69□□□□□ -0.86
TCF4-203ENST00000398339 ZSCAN16Q9H4T2 348 aaPredicted RBP9.69□□□□□ -0.86
TCF4-203ENST00000398339 KCND1Q9NSA2 647 aa9.69□□□□□ -0.86
TCF4-203ENST00000398339 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.69□□□□□ -0.86
TCF4-203ENST00000398339 MED1Q15648 1581 aaPredicted RBP9.68□□□□□ -0.86
TCF4-203ENST00000398339 DIP2BQ9P265 1576 aa9.68□□□□□ -0.86
TCF4-203ENST00000398339 KDM4FA0A1W2PPD8 638 aa9.68□□□□□ -0.86
TCF4-203ENST00000398339 SLFNL1Q499Z3 407 aa9.68□□□□□ -0.86
TCF4-203ENST00000398339 ZNF589Q86UQ0 364 aaPredicted RBP9.68□□□□□ -0.86
TCF4-203ENST00000398339 CCAR2Q8N163 923 aaKnown RBP9.68□□□□□ -0.86
TCF4-203ENST00000398339 USHBP1Q8N6Y0 703 aa9.68□□□□□ -0.86
TCF4-203ENST00000398339 DDX11Q96FC9 970 aa9.68□□□□□ -0.86
TCF4-203ENST00000398339 MAP3K2Q9Y2U5 619 aa9.68□□□□□ -0.86
TCF4-203ENST00000398339 SH3BP1Q9Y3L3 701 aa9.68□□□□□ -0.86
TCF4-203ENST00000398339 USP16Q9Y5T5 823 aa9.68□□□□□ -0.86
TCF4-203ENST00000398339 H3BQV1 296 aa9.68□□□□□ -0.86
TCF4-203ENST00000398339 G3BP1Q13283 466 aaKnown RBP eCLIP9.68□□□□□ -0.86
TCF4-203ENST00000398339 IFFO2Q5TF58 517 aa9.68□□□□□ -0.86
TCF4-203ENST00000398339 FBXO38Q6PIJ6 1188 aa9.68□□□□□ -0.86
TCF4-203ENST00000398339 CCAR1Q8IX12 1150 aaKnown RBP9.68□□□□□ -0.86
TCF4-203ENST00000398339 BOLA2Q9H3K6 86 aa9.68□□□□□ -0.86
TCF4-203ENST00000398339 LGR6Q9HBX8 967 aa9.68□□□□□ -0.86
TCF4-203ENST00000398339 TLR7Q9NYK1 1049 aaKnown RBP9.68□□□□□ -0.86
TCF4-203ENST00000398339 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.68□□□□□ -0.86
TCF4-203ENST00000398339 V9GYY5 206 aaPredicted RBP9.68□□□□□ -0.86
TCF4-203ENST00000398339 ERBB3P21860 1342 aa9.67□□□□□ -0.86
TCF4-203ENST00000398339 BECN2A8MW95 431 aa9.67□□□□□ -0.86
TCF4-203ENST00000398339 IRF6O14896 467 aa9.67□□□□□ -0.86
TCF4-203ENST00000398339 TAF5LO75529 589 aa9.67□□□□□ -0.86
TCF4-203ENST00000398339 ADD1P35611 737 aaKnown RBP9.67□□□□□ -0.86
TCF4-203ENST00000398339 KRT32Q14532 448 aa9.67□□□□□ -0.86
TCF4-203ENST00000398339 ELF2Q15723 593 aa9.67□□□□□ -0.86
TCF4-203ENST00000398339 USPL1Q5W0Q7 1092 aa9.67□□□□□ -0.86
TCF4-203ENST00000398339 DHX40Q8IX18 779 aaKnown RBP9.67□□□□□ -0.86
TCF4-203ENST00000398339 TRMT1Q9NXH9 659 aaKnown RBP9.67□□□□□ -0.86
TCF4-203ENST00000398339 TNRQ92752 1358 aa9.67□□□□□ -0.86
TCF4-203ENST00000398339 SLU7O95391 586 aaKnown RBP9.67□□□□□ -0.86
TCF4-203ENST00000398339 KSR2Q6VAB6 950 aa9.67□□□□□ -0.86
TCF4-203ENST00000398339 FILIP1Q7Z7B0 1213 aa9.67□□□□□ -0.86
TCF4-203ENST00000398339 SUCLG2Q96I99 432 aa9.67□□□□□ -0.86
TCF4-203ENST00000398339 GOLPH3LQ9H4A5 285 aa9.67□□□□□ -0.86
TCF4-203ENST00000398339 DBF4Q9UBU7 674 aaPredicted RBP9.67□□□□□ -0.86
TCF4-203ENST00000398339 RCOR1Q9UKL0 485 aa9.67□□□□□ -0.86
TCF4-203ENST00000398339 PLEKHG1Q9ULL1 1385 aa9.66□□□□□ -0.86
TCF4-203ENST00000398339 KIF2AO00139 706 aaPredicted RBP9.66□□□□□ -0.86
TCF4-203ENST00000398339 CEBPZQ03701 1054 aaKnown RBP9.66□□□□□ -0.86
TCF4-203ENST00000398339 CWF19L2Q2TBE0 894 aaKnown RBP9.66□□□□□ -0.86
TCF4-203ENST00000398339 NUTM2GQ5VZR2 741 aa9.66□□□□□ -0.86
TCF4-203ENST00000398339 NEK1Q96PY6 1258 aa9.66□□□□□ -0.86
TCF4-203ENST00000398339 ANO10Q9NW15 660 aa9.66□□□□□ -0.86
TCF4-203ENST00000398339 KDM3BQ7LBC6 1761 aa9.66□□□□□ -0.86
TCF4-203ENST00000398339 GSDMDP57764 484 aa9.66□□□□□ -0.86
TCF4-203ENST00000398339 SNW1Q13573 536 aaKnown RBP9.66□□□□□ -0.86
TCF4-203ENST00000398339 CCDC73Q6ZRK6 1079 aa9.66□□□□□ -0.86
TCF4-203ENST00000398339 Q6ZUG5 572 aa9.66□□□□□ -0.86
TCF4-203ENST00000398339 SMARCC2Q8TAQ2 1214 aa9.66□□□□□ -0.86
TCF4-203ENST00000398339 KAZALD1Q96I82 304 aa9.66□□□□□ -0.86
TCF4-203ENST00000398339 ESF1Q9H501 851 aaKnown RBP9.66□□□□□ -0.86
TCF4-203ENST00000398339 BTBD11A6QL63 1104 aa9.65□□□□□ -0.86
TCF4-203ENST00000398339 NAA16Q6N069 864 aaPredicted RBP9.65□□□□□ -0.86
TCF4-203ENST00000398339 ENGASEQ8NFI3 743 aa9.65□□□□□ -0.86
TCF4-203ENST00000398339 BICC1Q9H694 974 aaKnown RBP9.65□□□□□ -0.86
TCF4-203ENST00000398339 UTYO14607 1347 aa9.65□□□□□ -0.86
TCF4-203ENST00000398339 UBR1Q8IWV7 1749 aa9.65□□□□□ -0.87
TCF4-203ENST00000398339 COL15A1P39059 1388 aa9.65□□□□□ -0.87
TCF4-203ENST00000398339 A0A087WWV3 80 aa9.65□□□□□ -0.87
TCF4-203ENST00000398339 CCDC66A2RUB6 948 aa9.65□□□□□ -0.87
TCF4-203ENST00000398339 GRM8O00222 908 aa9.65□□□□□ -0.87
TCF4-203ENST00000398339 KINO60870 393 aaKnown RBP9.65□□□□□ -0.87
TCF4-203ENST00000398339 LTKP29376 864 aa9.65□□□□□ -0.87
TCF4-203ENST00000398339 SCRN1Q12765 414 aa9.65□□□□□ -0.87
TCF4-203ENST00000398339 PROSER3Q2NL68 480 aa9.65□□□□□ -0.87
TCF4-203ENST00000398339 CEP57L1Q8IYX8 460 aa9.65□□□□□ -0.87
TCF4-203ENST00000398339 LLPHQ9BRT6 129 aaKnown RBP9.65□□□□□ -0.87
TCF4-203ENST00000398339 FTOQ9C0B1 505 aaKnown RBP eCLIP9.65□□□□□ -0.87
TCF4-203ENST00000398339 OSBPL5Q9H0X9 879 aaPredicted RBP9.65□□□□□ -0.87
TCF4-203ENST00000398339 FAM160A1Q05DH4 1040 aa9.64□□□□□ -0.87
TCF4-203ENST00000398339 TEFQ10587 303 aa9.64□□□□□ -0.87
TCF4-203ENST00000398339 SEMA3FQ13275 785 aa9.64□□□□□ -0.87
TCF4-203ENST00000398339 EP400NLQ6ZTU2 488 aa9.64□□□□□ -0.87
TCF4-203ENST00000398339 NBPF11Q86T75 865 aa9.64□□□□□ -0.87
TCF4-203ENST00000398339 AOPEPQ8N6M6 819 aa9.64□□□□□ -0.87
TCF4-203ENST00000398339 GPATCH11Q8N954 259 aa9.64□□□□□ -0.87
TCF4-203ENST00000398339 ZNF526Q8TF50 670 aaPredicted RBP9.64□□□□□ -0.87
TCF4-203ENST00000398339 ZBTB9Q96C00 473 aa9.64□□□□□ -0.87
TCF4-203ENST00000398339 L2HGDHQ9H9P8 463 aa9.64□□□□□ -0.87
TCF4-203ENST00000398339 ZNF446Q9NWS9 450 aa9.64□□□□□ -0.87
TCF4-203ENST00000398339 IMPACTQ9P2X3 320 aa9.64□□□□□ -0.87
TCF4-203ENST00000398339 DIP2AQ14689 1571 aa9.64□□□□□ -0.87
TCF4-203ENST00000398339 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.64□□□□□ -0.87
TCF4-203ENST00000398339 PFKFB2O60825 505 aa9.64□□□□□ -0.87
TCF4-203ENST00000398339 ATL3Q6DD88 541 aa9.64□□□□□ -0.87
TCF4-203ENST00000398339 NSUN7Q8NE18 718 aaKnown RBP9.64□□□□□ -0.87
TCF4-203ENST00000398339 LINS1Q8NG48 757 aa9.64□□□□□ -0.87
TCF4-203ENST00000398339 EDC3Q96F86 508 aaKnown RBP9.64□□□□□ -0.87
TCF4-203ENST00000398339 ZNF396Q96N95 335 aaPredicted RBP9.64□□□□□ -0.87
TCF4-203ENST00000398339 SLC26A8Q96RN1 970 aa9.64□□□□□ -0.87
TCF4-203ENST00000398339 USP28Q96RU2 1077 aa9.64□□□□□ -0.87
TCF4-203ENST00000398339 SIL1Q9H173 461 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms