RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 USP17L17D6RBQ6 530 aa4.88□□□□□ -1.63
UBE3A-202ENST00000397954 USP17L19D6RCP7 530 aa4.88□□□□□ -1.63
UBE3A-202ENST00000397954 USP17L20D6RJB6 530 aa4.88□□□□□ -1.63
UBE3A-202ENST00000397954 GALR2O43603 387 aaPredicted RBP4.88□□□□□ -1.63
UBE3A-202ENST00000397954 GRIN3BO60391 1043 aa4.88□□□□□ -1.63
UBE3A-202ENST00000397954 SIK1P57059 783 aa4.88□□□□□ -1.63
UBE3A-202ENST00000397954 USP17L24Q0WX57 530 aa4.88□□□□□ -1.63
UBE3A-202ENST00000397954 EZH2Q15910 746 aaKnown RBP4.88□□□□□ -1.63
UBE3A-202ENST00000397954 HSP90AB3PQ58FF7 597 aa4.88□□□□□ -1.63
UBE3A-202ENST00000397954 SULT6B1Q6IMI4 303 aa4.88□□□□□ -1.63
UBE3A-202ENST00000397954 TMC4Q7Z404 712 aa4.88□□□□□ -1.63
UBE3A-202ENST00000397954 SULF1Q8IWU6 871 aa4.88□□□□□ -1.63
UBE3A-202ENST00000397954 PIP4P2Q8N4L2 257 aa4.88□□□□□ -1.63
UBE3A-202ENST00000397954 RDH13Q8NBN7 331 aa4.88□□□□□ -1.63
UBE3A-202ENST00000397954 PLEKHF1Q96S99 279 aa4.88□□□□□ -1.63
UBE3A-202ENST00000397954 BACH2Q9BYV9 841 aa4.88□□□□□ -1.63
UBE3A-202ENST00000397954 FER1L6Q2WGJ9 1857 aa4.88□□□□□ -1.63
UBE3A-202ENST00000397954 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.88□□□□□ -1.63
UBE3A-202ENST00000397954 USP17L5A8MUK1 530 aa4.88□□□□□ -1.63
UBE3A-202ENST00000397954 ATP2B4P23634 1241 aa4.88□□□□□ -1.63
UBE3A-202ENST00000397954 ATN1P54259 1190 aaPredicted RBP4.88□□□□□ -1.63
UBE3A-202ENST00000397954 DPH6Q7L8W6 267 aa4.88□□□□□ -1.63
UBE3A-202ENST00000397954 TTC5Q8N0Z6 440 aa4.88□□□□□ -1.63
UBE3A-202ENST00000397954 HELBQ8NG08 1087 aaPredicted RBP4.88□□□□□ -1.63
UBE3A-202ENST00000397954 SYMPKQ92797 1274 aaKnown RBP4.88□□□□□ -1.63
UBE3A-202ENST00000397954 PRKRIP1Q9H875 184 aaPredicted RBP4.88□□□□□ -1.63
UBE3A-202ENST00000397954 TIAM2Q8IVF5 1701 aa4.88□□□□□ -1.63
UBE3A-202ENST00000397954 ABL1P00519 1130 aa4.87□□□□□ -1.63
UBE3A-202ENST00000397954 SOX11P35716 441 aa4.87□□□□□ -1.63
UBE3A-202ENST00000397954 TEFQ10587 303 aa4.87□□□□□ -1.63
UBE3A-202ENST00000397954 TAF7Q15545 349 aaPredicted RBP4.87□□□□□ -1.63
UBE3A-202ENST00000397954 ATG3Q9NT62 314 aa4.87□□□□□ -1.63
UBE3A-202ENST00000397954 RTCBQ9Y3I0 505 aaKnown RBP4.87□□□□□ -1.63
UBE3A-202ENST00000397954 SCN4AP35499 1836 aa4.87□□□□□ -1.63
UBE3A-202ENST00000397954 PNPLA7Q6ZV29 1317 aa4.87□□□□□ -1.63
UBE3A-202ENST00000397954 ANKRD31Q8N7Z5 1873 aa4.87□□□□□ -1.63
UBE3A-202ENST00000397954 WDR90Q96KV7 1748 aa4.87□□□□□ -1.63
UBE3A-202ENST00000397954 PPP1R3GB7ZBB8 358 aa4.87□□□□□ -1.63
UBE3A-202ENST00000397954 ERCC5P28715 1186 aaPredicted RBP4.87□□□□□ -1.63
UBE3A-202ENST00000397954 PTK7Q13308 1070 aa4.87□□□□□ -1.63
UBE3A-202ENST00000397954 WDR43Q15061 677 aaKnown RBP eCLIP4.87□□□□□ -1.631e-6■□□□□ 10.7
UBE3A-202ENST00000397954 WDR63Q8IWG1 891 aa4.87□□□□□ -1.63
UBE3A-202ENST00000397954 PIGBQ92521 554 aa4.87□□□□□ -1.63
UBE3A-202ENST00000397954 ADAM33Q9BZ11 813 aa4.87□□□□□ -1.63
UBE3A-202ENST00000397954 CCDC87Q9NVE4 849 aa4.87□□□□□ -1.63
UBE3A-202ENST00000397954 IFT57Q9NWB7 429 aa4.87□□□□□ -1.63
UBE3A-202ENST00000397954 RBM27Q9P2N5 1060 aaKnown RBP4.87□□□□□ -1.63
UBE3A-202ENST00000397954 LTBP3Q9NS15 1303 aa4.87□□□□□ -1.63
UBE3A-202ENST00000397954 CARMIL3Q8ND23 1372 aa4.87□□□□□ -1.63
UBE3A-202ENST00000397954 LAMB1P07942 1786 aa4.87□□□□□ -1.63
UBE3A-202ENST00000397954 H3BRB1 525 aa4.86□□□□□ -1.63
UBE3A-202ENST00000397954 LGR5O75473 907 aa4.86□□□□□ -1.63
UBE3A-202ENST00000397954 SNRPA1P09661 255 aaKnown RBP4.86□□□□□ -1.63
UBE3A-202ENST00000397954 FBXO45P0C2W1 286 aa4.86□□□□□ -1.63
UBE3A-202ENST00000397954 SKIP12755 728 aa4.86□□□□□ -1.63
UBE3A-202ENST00000397954 KCNH2Q12809 1159 aa4.86□□□□□ -1.63
UBE3A-202ENST00000397954 MTMR2Q13614 643 aa4.86□□□□□ -1.63
UBE3A-202ENST00000397954 MTMR3Q13615 1198 aa4.86□□□□□ -1.63
UBE3A-202ENST00000397954 CC2D2BQ6DHV5 1058 aa4.86□□□□□ -1.63
UBE3A-202ENST00000397954 TUT1Q9H6E5 874 aaKnown RBP4.86□□□□□ -1.63
UBE3A-202ENST00000397954 MKRN1Q9UHC7 482 aaKnown RBP4.86□□□□□ -1.63
UBE3A-202ENST00000397954 COL15A1P39059 1388 aa4.86□□□□□ -1.63
UBE3A-202ENST00000397954 ARAP2Q8WZ64 1704 aa4.86□□□□□ -1.63
UBE3A-202ENST00000397954 USP42Q9H9J4 1324 aaKnown RBP4.86□□□□□ -1.63
UBE3A-202ENST00000397954 FAM196BA6NMK8 535 aa4.86□□□□□ -1.63
UBE3A-202ENST00000397954 ANP32CO43423 234 aa4.86□□□□□ -1.63
UBE3A-202ENST00000397954 VAMP1P23763 118 aa4.86□□□□□ -1.63
UBE3A-202ENST00000397954 NCOA4Q13772 614 aa4.86□□□□□ -1.63
UBE3A-202ENST00000397954 NUDT18Q6ZVK8 323 aa4.86□□□□□ -1.63
UBE3A-202ENST00000397954 NYXQ9GZU5 481 aa4.86□□□□□ -1.63
UBE3A-202ENST00000397954 NARFQ9UHQ1 456 aa4.86□□□□□ -1.63
UBE3A-202ENST00000397954 TSKSQ9UJT2 592 aa4.86□□□□□ -1.63
UBE3A-202ENST00000397954 SMAPO00193 183 aa4.86□□□□□ -1.63
UBE3A-202ENST00000397954 RASA1P20936 1047 aa4.86□□□□□ -1.63
UBE3A-202ENST00000397954 CANXP27824 592 aaKnown RBP4.86□□□□□ -1.63
UBE3A-202ENST00000397954 FOSBP53539 338 aa4.86□□□□□ -1.63
UBE3A-202ENST00000397954 GNAI1P63096 354 aa4.86□□□□□ -1.63
UBE3A-202ENST00000397954 TRAPPC3LQ5T215 181 aa4.86□□□□□ -1.63
UBE3A-202ENST00000397954 ZNF790Q6PG37 636 aa4.86□□□□□ -1.63
UBE3A-202ENST00000397954 ANKRD13AQ8IZ07 590 aa4.86□□□□□ -1.63
UBE3A-202ENST00000397954 ZNF594Q96JF6 807 aaPredicted RBP4.86□□□□□ -1.63
UBE3A-202ENST00000397954 TMEM134Q9H6X4 195 aa4.86□□□□□ -1.63
UBE3A-202ENST00000397954 SBF1O95248 1867 aa4.86□□□□□ -1.63
UBE3A-202ENST00000397954 HDLBPQ00341 1268 aaKnown RBP4.85□□□□□ -1.63
UBE3A-202ENST00000397954 MTHFSDQ2M296 383 aaKnown RBP4.85□□□□□ -1.63
UBE3A-202ENST00000397954 PARP10Q53GL7 1025 aa4.85□□□□□ -1.63
UBE3A-202ENST00000397954 CERS3Q8IU89 383 aa4.85□□□□□ -1.63
UBE3A-202ENST00000397954 ZNF454Q8N9F8 522 aa4.85□□□□□ -1.63
UBE3A-202ENST00000397954 DDX54Q8TDD1 881 aaKnown RBP4.85□□□□□ -1.63
UBE3A-202ENST00000397954 CLP1Q92989 425 aaKnown RBP4.85□□□□□ -1.63
UBE3A-202ENST00000397954 COL11A2P13942 1736 aaPredicted RBP4.85□□□□□ -1.63
UBE3A-202ENST00000397954 PRMT3O60678 531 aa4.85□□□□□ -1.63
UBE3A-202ENST00000397954 COL9A1P20849 921 aa4.85□□□□□ -1.63
UBE3A-202ENST00000397954 PRKAR2BP31323 418 aa4.85□□□□□ -1.63
UBE3A-202ENST00000397954 A0A1B0GUL6 1792 aa4.85□□□□□ -1.63
UBE3A-202ENST00000397954 RTL9Q8NET4 1388 aa4.84□□□□□ -1.63
UBE3A-202ENST00000397954 C6orf229H3BNL8 230 aa4.84□□□□□ -1.63
UBE3A-202ENST00000397954 CYP19A1P11511 503 aaPredicted RBP4.84□□□□□ -1.63
UBE3A-202ENST00000397954 MAPK1P28482 360 aa4.84□□□□□ -1.63
UBE3A-202ENST00000397954 ATP6V1AP38606 617 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms