RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 TTC41PQ6P2S7 1318 aa23.58■■□□□ 1.37
PDLIM2-204ENST00000397760 GSE1Q14687 1217 aa23.58■■□□□ 1.37
PDLIM2-204ENST00000397760 ANKRD18AQ8IVF6 992 aa23.58■■□□□ 1.37
PDLIM2-204ENST00000397760 UPF1Q92900 1129 aaKnown RBP eCLIP23.58■■□□□ 1.374e-7■■■■■ 26.8
PDLIM2-204ENST00000397760 ECHDC1Q9NTX5 307 aa23.58■■□□□ 1.37
PDLIM2-204ENST00000397760 RIC1Q4ADV7 1423 aa23.58■■□□□ 1.37
PDLIM2-204ENST00000397760 PI4K2BQ8TCG2 481 aa23.57■■□□□ 1.36
PDLIM2-204ENST00000397760 AKAP2Q9Y2D5 859 aa23.57■■□□□ 1.36
PDLIM2-204ENST00000397760 TIMM10P62072 90 aa23.56■■□□□ 1.36
PDLIM2-204ENST00000397760 NEUROD6Q96NK8 337 aa23.56■■□□□ 1.36
PDLIM2-204ENST00000397760 DBNLQ9UJU6 430 aaKnown RBP23.56■■□□□ 1.36
PDLIM2-204ENST00000397760 MROH5Q6ZUA9 1318 aa23.56■■□□□ 1.36
PDLIM2-204ENST00000397760 DDX46Q7L014 1031 aaKnown RBP23.56■■□□□ 1.36
PDLIM2-204ENST00000397760 ERC2O15083 957 aa23.55■■□□□ 1.36
PDLIM2-204ENST00000397760 SDSP20132 328 aa23.55■■□□□ 1.36
PDLIM2-204ENST00000397760 CELF1Q92879 486 aaKnown RBP23.55■■□□□ 1.36
PDLIM2-204ENST00000397760 A0A1B0GUL7 405 aa23.54■■□□□ 1.36
PDLIM2-204ENST00000397760 GLRX3O76003 335 aaKnown RBP23.54■■□□□ 1.36
PDLIM2-204ENST00000397760 DBNDD2Q9BQY9 259 aa23.54■■□□□ 1.36
PDLIM2-204ENST00000397760 PDGFDQ9GZP0 370 aaPredicted RBP23.54■■□□□ 1.36
PDLIM2-204ENST00000397760 LRP5O75197 1615 aa23.54■■□□□ 1.36
PDLIM2-204ENST00000397760 PDE8BO95263 885 aa23.54■■□□□ 1.36
PDLIM2-204ENST00000397760 RPS8P62241 208 aaKnown RBP23.54■■□□□ 1.36
PDLIM2-204ENST00000397760 VGLL2Q8N8G2 317 aa23.54■■□□□ 1.36
PDLIM2-204ENST00000397760 BSDC1Q9NW68 430 aaPredicted RBP23.54■■□□□ 1.36
PDLIM2-204ENST00000397760 QSER1Q2KHR3 1735 aa23.54■■□□□ 1.36
PDLIM2-204ENST00000397760 ZNF609O15014 1411 aa23.53■■□□□ 1.36
PDLIM2-204ENST00000397760 CRY2Q49AN0 593 aa23.53■■□□□ 1.36
PDLIM2-204ENST00000397760 HELBQ8NG08 1087 aaPredicted RBP23.53■■□□□ 1.36
PDLIM2-204ENST00000397760 TNRC6CQ9HCJ0 1690 aaKnown RBP23.53■■□□□ 1.36
PDLIM2-204ENST00000397760 ATP2B3Q16720 1220 aa23.52■■□□□ 1.36
PDLIM2-204ENST00000397760 RPGRQ92834 1020 aaKnown RBP23.52■■□□□ 1.36
PDLIM2-204ENST00000397760 BRIP1Q9BX63 1249 aa23.52■■□□□ 1.36
PDLIM2-204ENST00000397760 KLRG2A4D1S0 409 aaPredicted RBP23.51■■□□□ 1.35
PDLIM2-204ENST00000397760 TRIM6-TRIM34B2RNG4 842 aa23.51■■□□□ 1.35
PDLIM2-204ENST00000397760 COL4A1P02462 1669 aa23.51■■□□□ 1.35
PDLIM2-204ENST00000397760 CHRNDQ07001 517 aa23.5■■□□□ 1.35
PDLIM2-204ENST00000397760 SLC16A10Q8TF71 515 aa23.5■■□□□ 1.35
PDLIM2-204ENST00000397760 RILPL2Q969X0 211 aa23.5■■□□□ 1.35
PDLIM2-204ENST00000397760 TAF5LO75529 589 aa23.49■■□□□ 1.35
PDLIM2-204ENST00000397760 GRAPQ13588 217 aa23.49■■□□□ 1.35
PDLIM2-204ENST00000397760 GRAPLQ8TC17 118 aaPredicted RBP23.49■■□□□ 1.35
PDLIM2-204ENST00000397760 CDC45O75419 566 aa23.49■■□□□ 1.35
PDLIM2-204ENST00000397760 MAP4K4O95819 1239 aaPredicted RBP23.49■■□□□ 1.35
PDLIM2-204ENST00000397760 ATP5JP18859 108 aa23.49■■□□□ 1.35
PDLIM2-204ENST00000397760 PUM3Q15397 648 aaKnown RBP23.49■■□□□ 1.35
PDLIM2-204ENST00000397760 XAGE2Q96GT9 111 aa23.49■■□□□ 1.35
PDLIM2-204ENST00000397760 RBM17Q96I25 401 aaKnown RBP23.49■■□□□ 1.35
PDLIM2-204ENST00000397760 BOLA2Q9H3K6 86 aa23.49■■□□□ 1.35
PDLIM2-204ENST00000397760 MINPP1Q9UNW1 487 aa23.49■■□□□ 1.35
PDLIM2-204ENST00000397760 ADORA1P30542 326 aa23.48■■□□□ 1.35
PDLIM2-204ENST00000397760 ANTXR1Q9H6X2 564 aa23.48■■□□□ 1.35
PDLIM2-204ENST00000397760 NRXN2Q9P2S2 1712 aa23.47■■□□□ 1.35
PDLIM2-204ENST00000397760 FGFR2P21802 821 aa23.47■■□□□ 1.35
PDLIM2-204ENST00000397760 GORABQ5T7V8 394 aa23.47■■□□□ 1.35
PDLIM2-204ENST00000397760 LPIN2Q92539 896 aa23.47■■□□□ 1.35
PDLIM2-204ENST00000397760 FRAT2O75474 233 aaPredicted RBP23.47■■□□□ 1.35
PDLIM2-204ENST00000397760 HOXA10P31260 410 aaPredicted RBP23.47■■□□□ 1.35
PDLIM2-204ENST00000397760 PDE6BP35913 854 aa23.47■■□□□ 1.35
PDLIM2-204ENST00000397760 TBC1D9Q6ZT07 1266 aa23.47■■□□□ 1.35
PDLIM2-204ENST00000397760 CASZ1Q86V15 1759 aa23.47■■□□□ 1.35
PDLIM2-204ENST00000397760 CCDC158Q5M9N0 1113 aa23.46■■□□□ 1.35
PDLIM2-204ENST00000397760 CNTROBQ8N137 903 aa23.46■■□□□ 1.35
PDLIM2-204ENST00000397760 C22orf23Q9BZE7 217 aa23.46■■□□□ 1.35
PDLIM2-204ENST00000397760 TBC1D2Q9BYX2 928 aa23.45■■□□□ 1.34
PDLIM2-204ENST00000397760 SNAP23O00161 211 aa23.45■■□□□ 1.34
PDLIM2-204ENST00000397760 SLC5A1P13866 664 aa23.45■■□□□ 1.34
PDLIM2-204ENST00000397760 CRAMP1Q96RY5 1269 aa23.45■■□□□ 1.34
PDLIM2-204ENST00000397760 TAF1P21675 1872 aa23.44■■□□□ 1.34
PDLIM2-204ENST00000397760 IFIT1P09914 478 aaKnown RBP23.43■■□□□ 1.34
PDLIM2-204ENST00000397760 SRGNP10124 158 aa23.43■■□□□ 1.34
PDLIM2-204ENST00000397760 TTC39AQ5SRH9 613 aa23.43■■□□□ 1.34
PDLIM2-204ENST00000397760 ANKRD2Q9GZV1 360 aa23.43■■□□□ 1.34
PDLIM2-204ENST00000397760 SPEF2Q9C093 1822 aa23.43■■□□□ 1.34
PDLIM2-204ENST00000397760 BBOX1O75936 387 aa23.43■■□□□ 1.34
PDLIM2-204ENST00000397760 CASC1Q6TDU7 716 aa23.43■■□□□ 1.34
PDLIM2-204ENST00000397760 EVI5LQ96CN4 794 aa23.43■■□□□ 1.34
PDLIM2-204ENST00000397760 EIF5BO60841 1220 aaKnown RBP23.42■■□□□ 1.34
PDLIM2-204ENST00000397760 NPR1P16066 1061 aa23.42■■□□□ 1.34
PDLIM2-204ENST00000397760 R3HDM1Q15032 1099 aaKnown RBP23.42■■□□□ 1.34
PDLIM2-204ENST00000397760 HAUS7Q99871 368 aa23.42■■□□□ 1.34
PDLIM2-204ENST00000397760 UBE4AQ14139 1066 aa23.41■■□□□ 1.34
PDLIM2-204ENST00000397760 RBM25P49756 843 aaKnown RBP23.4■■□□□ 1.34
PDLIM2-204ENST00000397760 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.4■■□□□ 1.34
PDLIM2-204ENST00000397760 DNAJC2Q99543 621 aaKnown RBP23.4■■□□□ 1.34
PDLIM2-204ENST00000397760 ZBTB7AO95365 584 aa23.4■■□□□ 1.34
PDLIM2-204ENST00000397760 MASTLQ96GX5 879 aa23.4■■□□□ 1.34
PDLIM2-204ENST00000397760 NDUFB9Q9Y6M9 179 aa23.4■■□□□ 1.34
PDLIM2-204ENST00000397760 ANKRD31Q8N7Z5 1873 aa23.39■■□□□ 1.34
PDLIM2-204ENST00000397760 CHMLP26374 656 aa23.39■■□□□ 1.33
PDLIM2-204ENST00000397760 CCDC102BQ68D86 513 aa23.39■■□□□ 1.33
PDLIM2-204ENST00000397760 C2CD5Q86YS7 1000 aa23.39■■□□□ 1.33
PDLIM2-204ENST00000397760 KCNJ4P48050 445 aa23.38■■□□□ 1.33
PDLIM2-204ENST00000397760 MFAP1P55081 439 aaKnown RBP23.38■■□□□ 1.33
PDLIM2-204ENST00000397760 EDC3Q96F86 508 aaKnown RBP23.38■■□□□ 1.33
PDLIM2-204ENST00000397760 WTIPA6NIX2 430 aaPredicted RBP23.38■■□□□ 1.33
PDLIM2-204ENST00000397760 H0YIN7 160 aa23.38■■□□□ 1.33
PDLIM2-204ENST00000397760 ALDH1B1P30837 517 aa23.38■■□□□ 1.33
PDLIM2-204ENST00000397760 PHKA1P46020 1223 aa23.38■■□□□ 1.33
PDLIM2-204ENST00000397760 ZNF512BQ96KM6 892 aaPredicted RBP23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms