RNA–Protein interactions for RNA: ENST00000397644.2

LINC00887-201, long intergenic non-protein coding RNA 887, humanhuman

TSL 5

Gene LINC00887, Length 416 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-201ENST00000397644 CACNA1FO60840 1977 aa9.54□□□□□ -0.88
LINC00887-201ENST00000397644 CCDC88AQ3V6T2 1871 aa9.53□□□□□ -0.88
LINC00887-201ENST00000397644 H7C1W4 665 aa9.53□□□□□ -0.88
LINC00887-201ENST00000397644 NBPF7P0C2Y1 421 aaPredicted RBP9.53□□□□□ -0.88
LINC00887-201ENST00000397644 POLD1P28340 1107 aa9.53□□□□□ -0.88
LINC00887-201ENST00000397644 PARP10Q53GL7 1025 aa9.53□□□□□ -0.88
LINC00887-201ENST00000397644 SUSD4Q5VX71 490 aa9.53□□□□□ -0.88
LINC00887-201ENST00000397644 TBC1D9BQ66K14 1250 aa9.53□□□□□ -0.88
LINC00887-201ENST00000397644 GPR153Q6NV75 609 aa9.53□□□□□ -0.88
LINC00887-201ENST00000397644 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.53□□□□□ -0.88
LINC00887-201ENST00000397644 NLRP10Q86W26 655 aa9.53□□□□□ -0.88
LINC00887-201ENST00000397644 NLGN1Q8N2Q7 840 aa9.53□□□□□ -0.88
LINC00887-201ENST00000397644 UTP14AQ9BVJ6 771 aaKnown RBP9.53□□□□□ -0.88
LINC00887-201ENST00000397644 RWDD1Q9H446 243 aaPredicted RBP9.53□□□□□ -0.88
LINC00887-201ENST00000397644 BCL2L12Q9HB09 334 aa9.53□□□□□ -0.88
LINC00887-201ENST00000397644 ZSWIM6Q9HCJ5 1215 aa9.53□□□□□ -0.88
LINC00887-201ENST00000397644 NPHP1O15259 732 aa9.52□□□□□ -0.89
LINC00887-201ENST00000397644 TPTE2Q6XPS3 522 aa9.52□□□□□ -0.89
LINC00887-201ENST00000397644 RPAP2Q8IXW5 612 aaPredicted RBP9.52□□□□□ -0.89
LINC00887-201ENST00000397644 ZBTB38Q8NAP3 1195 aaPredicted RBP9.52□□□□□ -0.89
LINC00887-201ENST00000397644 FAM89AQ96GI7 184 aa9.52□□□□□ -0.89
LINC00887-201ENST00000397644 C1orf115Q9H7X2 142 aa9.52□□□□□ -0.89
LINC00887-201ENST00000397644 PCDHB15Q9Y5E8 787 aa9.52□□□□□ -0.89
LINC00887-201ENST00000397644 LRRFIP2Q9Y608 721 aaKnown RBP9.52□□□□□ -0.89
LINC00887-201ENST00000397644 USP42Q9H9J4 1324 aaKnown RBP9.52□□□□□ -0.89
LINC00887-201ENST00000397644 COL11A2P13942 1736 aaPredicted RBP9.51□□□□□ -0.89
LINC00887-201ENST00000397644 TIAM2Q8IVF5 1701 aa9.51□□□□□ -0.89
LINC00887-201ENST00000397644 ATP10DQ9P241 1426 aa9.51□□□□□ -0.89
LINC00887-201ENST00000397644 PCCAP05165 728 aaPredicted RBP9.51□□□□□ -0.89
LINC00887-201ENST00000397644 GYS1P13807 737 aa9.51□□□□□ -0.89
LINC00887-201ENST00000397644 HSP90B1P14625 803 aaKnown RBP9.51□□□□□ -0.89
LINC00887-201ENST00000397644 YY1P25490 414 aa9.51□□□□□ -0.89
LINC00887-201ENST00000397644 ATP8B2P98198 1209 aa9.51□□□□□ -0.89
LINC00887-201ENST00000397644 ARSIQ5FYB1 569 aa9.51□□□□□ -0.89
LINC00887-201ENST00000397644 B4GALNT3Q6L9W6 998 aa9.51□□□□□ -0.89
LINC00887-201ENST00000397644 UBE3BQ7Z3V4 1068 aa9.51□□□□□ -0.89
LINC00887-201ENST00000397644 NBPF5PQ86XG9 351 aaPredicted RBP9.51□□□□□ -0.89
LINC00887-201ENST00000397644 NYXQ9GZU5 481 aa9.51□□□□□ -0.89
LINC00887-201ENST00000397644 UTYO14607 1347 aa9.51□□□□□ -0.89
LINC00887-201ENST00000397644 ANKRD31Q8N7Z5 1873 aa9.51□□□□□ -0.89
LINC00887-201ENST00000397644 IRS4O14654 1257 aaPredicted RBP9.5□□□□□ -0.89
LINC00887-201ENST00000397644 TM4SF1P30408 202 aa9.5□□□□□ -0.89
LINC00887-201ENST00000397644 NFIXQ14938 502 aa9.5□□□□□ -0.89
LINC00887-201ENST00000397644 SYNE4Q8N205 404 aa9.5□□□□□ -0.89
LINC00887-201ENST00000397644 TMC2Q8TDI7 906 aa9.5□□□□□ -0.89
LINC00887-201ENST00000397644 SLC16A10Q8TF71 515 aa9.5□□□□□ -0.89
LINC00887-201ENST00000397644 SUCLG2Q96I99 432 aa9.5□□□□□ -0.89
LINC00887-201ENST00000397644 SYT17Q9BSW7 474 aa9.5□□□□□ -0.89
LINC00887-201ENST00000397644 KRTAP3-3Q9BYR6 98 aa9.5□□□□□ -0.89
LINC00887-201ENST00000397644 KRTAP3-2Q9BYR7 98 aa9.5□□□□□ -0.89
LINC00887-201ENST00000397644 ARFGEF2Q9Y6D5 1785 aa9.5□□□□□ -0.89
LINC00887-201ENST00000397644 NRXN2Q9P2S2 1712 aa9.49□□□□□ -0.89
LINC00887-201ENST00000397644 HMMRO75330 724 aa9.49□□□□□ -0.89
LINC00887-201ENST00000397644 IGHDP01880 384 aa9.49□□□□□ -0.89
LINC00887-201ENST00000397644 SERPINB2P05120 415 aa9.49□□□□□ -0.89
LINC00887-201ENST00000397644 HCLS1P14317 486 aaPredicted RBP9.49□□□□□ -0.89
LINC00887-201ENST00000397644 NUTM1Q86Y26 1132 aa9.49□□□□□ -0.89
LINC00887-201ENST00000397644 ANKRD44Q8N8A2 993 aa9.49□□□□□ -0.89
LINC00887-201ENST00000397644 NLGN2Q8NFZ4 835 aa9.49□□□□□ -0.89
LINC00887-201ENST00000397644 KHSRPQ92945 711 aaKnown RBP eCLIP9.49□□□□□ -0.89
LINC00887-201ENST00000397644 PARP3Q9Y6F1 533 aa9.49□□□□□ -0.89
LINC00887-201ENST00000397644 UBN2Q6ZU65 1347 aa9.49□□□□□ -0.89
LINC00887-201ENST00000397644 SH3TC1Q8TE82 1336 aa9.49□□□□□ -0.89
LINC00887-201ENST00000397644 PDE8AO60658 829 aa9.48□□□□□ -0.89
LINC00887-201ENST00000397644 CASP7P55210 303 aa9.48□□□□□ -0.89
LINC00887-201ENST00000397644 FOXO4P98177 505 aa9.48□□□□□ -0.89
LINC00887-201ENST00000397644 ERFEQ4G0M1 354 aa9.48□□□□□ -0.89
LINC00887-201ENST00000397644 SLC10A5Q5PT55 438 aa9.48□□□□□ -0.89
LINC00887-201ENST00000397644 CEP85Q6P2H3 762 aa9.48□□□□□ -0.89
LINC00887-201ENST00000397644 LMBR1LQ6UX01 489 aa9.48□□□□□ -0.89
LINC00887-201ENST00000397644 BICC1Q9H694 974 aaKnown RBP9.48□□□□□ -0.89
LINC00887-201ENST00000397644 CHMP3Q9Y3E7 222 aa9.48□□□□□ -0.89
LINC00887-201ENST00000397644 SBF1O95248 1867 aa9.48□□□□□ -0.89
LINC00887-201ENST00000397644 PXDNLA1KZ92 1463 aa9.47□□□□□ -0.89
LINC00887-201ENST00000397644 SRGAP3O43295 1099 aa9.47□□□□□ -0.89
LINC00887-201ENST00000397644 NTSR2O95665 410 aa9.47□□□□□ -0.89
LINC00887-201ENST00000397644 HDAC1Q13547 482 aaPredicted RBP9.47□□□□□ -0.89
LINC00887-201ENST00000397644 EPHA10Q5JZY3 1008 aa9.47□□□□□ -0.89
LINC00887-201ENST00000397644 VARS2Q5ST30 1063 aaKnown RBP9.47□□□□□ -0.89
LINC00887-201ENST00000397644 ERICH6Q7L0X2 663 aa9.47□□□□□ -0.89
LINC00887-201ENST00000397644 SPNS2Q8IVW8 549 aa9.47□□□□□ -0.89
LINC00887-201ENST00000397644 SIRT2Q8IXJ6 389 aa9.47□□□□□ -0.89
LINC00887-201ENST00000397644 CCDC24Q8N4L8 307 aa9.47□□□□□ -0.89
LINC00887-201ENST00000397644 KAZALD1Q96I82 304 aa9.47□□□□□ -0.89
LINC00887-201ENST00000397644 NLRP3Q96P20 1036 aa9.47□□□□□ -0.89
LINC00887-201ENST00000397644 IBTKQ9P2D0 1353 aaPredicted RBP9.47□□□□□ -0.89
LINC00887-201ENST00000397644 ANKRD36CQ5JPF3 1778 aa9.47□□□□□ -0.89
LINC00887-201ENST00000397644 PNMA6EA0A0J9YXQ4 647 aa9.46□□□□□ -0.9
LINC00887-201ENST00000397644 CSF1RP07333 972 aa9.46□□□□□ -0.9
LINC00887-201ENST00000397644 MMP10P09238 476 aa9.46□□□□□ -0.9
LINC00887-201ENST00000397644 ST5P78524 1137 aa9.46□□□□□ -0.9
LINC00887-201ENST00000397644 GPR162Q16538 588 aa9.46□□□□□ -0.9
LINC00887-201ENST00000397644 CCDC57Q2TAC2 916 aa9.46□□□□□ -0.9
LINC00887-201ENST00000397644 CNBD1Q8NA66 436 aa9.46□□□□□ -0.9
LINC00887-201ENST00000397644 TTLL11Q8NHH1 800 aa9.46□□□□□ -0.9
LINC00887-201ENST00000397644 CCDC85AQ96PX6 553 aaPredicted RBP9.46□□□□□ -0.9
LINC00887-201ENST00000397644 PLA2G12BQ9BX93 195 aa9.46□□□□□ -0.9
LINC00887-201ENST00000397644 WWC3Q9ULE0 1092 aa9.46□□□□□ -0.9
LINC00887-201ENST00000397644 NUP98P52948 1817 aa9.46□□□□□ -0.9
LINC00887-201ENST00000397644 CDHR2Q9BYE9 1310 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms